tRNA genes clustered and arranged according to each identical group

Freshwater metagenome, viral RNA fraction from lake water filtrate

Anticodon = GTG

HIT: 4 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.452374 (116 seq.)
>W1710815690	LKKM01000010	Gammaproteobacteria	Pseudomonas sp. TTU2014-105ASC [LKKM]	39048	39123	+	His	GTG	[ENA]	○
>W1711083746	LSVE01000023	Gammaproteobacteria	Stutzerimonas stutzeri [LSVE]	424073	424148	+	His	GTG	[ENA]	○
>W1711174185	LWDZ01000014	Gammaproteobacteria	Pseudomonas argentinensis [LWDZ]	16369	16294	-	His	GTG	[ENA]	○
>W1711174489	LWEF01000575	Gammaproteobacteria	Stutzerimonas frequens stutzeri [LWEF]	156063	155988	-	His	GTG	[ENA]	○
>W1711178789	LWHA01000013	Gammaproteobacteria	Pseudomonas seleniipraecipitans punonensis [LWHA]	50993	50918	-	His	GTG	[ENA]	○
>W1711339558	MCAL01000046	Gammaproteobacteria	Pseudomonas sp. K35 [MCAL]	13648	13573	-	His	GTG	[ENA]	○
>W1711344738	MCNJ01000028	Gammaproteobacteria	Pseudomonas sp. CO183 [MCNJ]	49812	49737	-	His	GTG	[ENA]	○
>W1711357036	MDGV01000016	Gammaproteobacteria	Stutzerimonas stutzeri [MDGV]	68651	68576	-	His	GTG	[ENA]	○
>W131046477	AMSL01000104	Gammaproteobacteria	Stutzerimonas degradans Chol1 [AMSL]	91337	91262	-	His	GTG	[ENA]	○
>W131049071	AMVM01000002	Gammaproteobacteria	Stutzerimonas stutzeri B1SMN1 [AMVM]	434510	434585	+	His	GTG	[ENA]	○
>W131086580	AOBS01000042	Gammaproteobacteria	Stutzerimonas stutzeri NF13 [AOBS]	55204	55279	+	His	GTG	[ENA]	○
>W1711421689	MHZI01000210	Gammaproteobacteria	Pseudomonadales bacterium GWC2_63_15 [MHZI]	1836	1761	-	His	GTG	[ENA]	○
>W1711658221	MQMM01000012	Gammaproteobacteria	Stutzerimonas degradans stutzeri [MQMM]	830928	831003	+	His	GTG	[ENA]	○
>W1711708767	MSXU01000009	Gammaproteobacteria	Pseudomonas sp. PA1(2017) [MSXU]	863954	863879	-	His	GTG	[ENA]	○
>W1711708818	MSXV01000030	Gammaproteobacteria	Pseudomonas sp. PA15(2017) [MSXV]	37726	37801	+	His	GTG	[ENA]	○
>W1711708859	MSXW01000008	Gammaproteobacteria	Pseudomonas sp. PA27(2017) [MSXW]	34414	34339	-	His	GTG	[ENA]	○
>W1711798157	MWUI01000008	Gammaproteobacteria	Stutzerimonas stutzeri [MWUI]	74683	74608	-	His	GTG	[ENA]	○
>W1711959832	NCKS02000274	Gammaproteobacteria	Stutzerimonas stutzeri [NCKS]	27853	27928	+	His	GTG	[ENA]	○
>W1712056335	NFZU01000012	Gammaproteobacteria	Stutzerimonas stutzeri [NFZU]	54383	54458	+	His	GTG	[ENA]	○
>C017835	CP000304	Gammaproteobacteria	Stutzerimonas stutzeri A1501 [CP000304]	2233630	2233705	+	His	GTG	[Ensembl]	○
>WENV180013144	FMSI01049318	[FMSI] soil metagenome; Soil		200	125	-	His	GTG	[ENA]	◯
>WENV180014110	FPIC01056673	[FPIC] soil metagenome; Soil		93	168	+	His	GTG	[ENA]	◯
>WENV180037754	FVAA011637471	[FVAA] soil metagenome; Soil		200	125	-	His	GTG	[ENA]	◯
>WENV180277064	OBHV01047415	[OBHV] metagenome; water		222	147	-	His	GTG	[ENA]	◯
>WENV180298216	OBJA01224481	[OBJA] soil metagenome; sediment, water from around vicinity		181	256	+	His	GTG	[ENA]	◯
>W141042062	AMCZ02000037	Gammaproteobacteria	Stutzerimonas stutzeri KOS6 [AMCZ]	3793	3718	-	His	GTG	[ENA]	○
>W141054683	AOFQ01000014	Gammaproteobacteria	Stutzerimonas chloritidismutans AW-1 [AOFQ]	41131	41206	+	His	GTG	[ENA]	○
>W141054709	AOFQ01000047	Gammaproteobacteria	Stutzerimonas chloritidismutans AW-1 [AOFQ]	2435	2510	+	His	GTG	[ENA]	○
>W141214448	AZSV01000002	Gammaproteobacteria	Pseudomonas sp. BAY1663 [AZSV]	41240	41315	+	His	GTG	[ENA]	○
>W141217321	AZVM01000002	Gammaproteobacteria	Pseudomonas sp. URMO17WK12:I4 [AZVM]	726804	726879	+	His	GTG	[ENA]	○
>W141217421	AZVO01000010	Gammaproteobacteria	Pseudomonas sp. URMO17WK12:I3 [AZVO]	376404	376479	+	His	GTG	[ENA]	○
>WENV170015759	AZII01006899	[AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte		346	421	+	His	GTG	[ENA]	◯
>WENV170136651	CENV01057885	[CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		173	98	-	His	GTG	[ENA]	◯
>WENV170221171	CEQA01013096	[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		3	78	+	His	GTG	[ENA]	◯
>WENV170345505	CETF01021244	[CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		783	858	+	His	GTG	[ENA]	◯
>WENV170366394	CETO01063875	[CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		1074	999	-	His	GTG	[ENA]	◯
>WENV170537269	CEWQ01045315	[CEWQ] marine metagenome genome assembly TARA_085_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		84	159	+	His	GTG	[ENA]	◯
>WENV170582543	FUFK010087258	[FUFK] metagenome; unknown		197	122	-	His	GTG	[ENA]	◯
>WENV170583937	FUFK010176380	[FUFK] metagenome; unknown		940	865	-	His	GTG	[ENA]	◯
>WENV170680609	LFEF01003001	[LFEF] freshwater metagenome; waterbloom		191072	191147	+	His	GTG	[ENA]	◯
>WENV170706824	LNAP01007271	[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		4498	4573	+	His	GTG	[ENA]	◯
>WENV170707195	LNAP01014996	[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		3	78	+	His	GTG	[ENA]	◯
>WENV170707950	LNAP01041491	[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		2008	1933	-	His	GTG	[ENA]	◯
>WENV170966923	MTEY01014224	[MTEY] soil metagenome; soil biostimulated with seedmeal as carbon source		553	478	-	His	GTG	[ENA]	◯
>C181114003	CP025149	Gammaproteobacteria	Stutzerimonas stutzeri SGAir0442 [CP025149]	2028192	2028117	-	His	GTG	-	○
>C181155779	CP027543	Gammaproteobacteria	Stutzerimonas stutzeri DW2-1 [CP027543]	95582	95507	-	His	GTG	-	○
>C181158338	CP027664	Gammaproteobacteria	Stutzerimonas stutzeri 1W1-1A [CP027664]	3687059	3686984	-	His	GTG	-	○
>C181184994	CP029772	Gammaproteobacteria	Stutzerimonas frequens R2A2 [CP029772]	1997371	1997296	-	His	GTG	-	○
>C191177754	CP040460	Gammaproteobacteria	Stutzerimonas degradans PheN2 [CP040460]	1625654	1625579	-	His	GTG	-	○
>C191206308	LR134319	Gammaproteobacteria	Stutzerimonas stutzeri NCTC10450 [LR134319]	2237636	2237711	+	His	GTG	-	○
>C191211892	LR134482	Gammaproteobacteria	Stutzerimonas stutzeri NCTC10475 [LR134482]	2242977	2242902	-	His	GTG	-	○
>W1910010973	BDJA01000003	Gammaproteobacteria	Pseudomonas sp. SCT [BDJA]	99459	99384	-	His	GTG	[ENA]	○
>W1910743696	MHZJ01000113	Gammaproteobacteria	Pseudomonadales bacterium RIFCSPHIGHO2_01_FULL_64_12 [MHZJ]	12871	12946	+	His	GTG	[ENA]	○
>W1910808429	MUEH01000001	Gammaproteobacteria	Stutzerimonas stutzeri KMS 55 [MUEH]	419963	420038	+	His	GTG	[ENA]	○
>W1911644211	PZYR01000009	Gammaproteobacteria	Stutzerimonas stutzeri AK6 [PZYR]	145658	145733	+	His	GTG	[ENA]	○
>W1911681284	QJUH01000022	Gammaproteobacteria	Pseudomonas sp. FRB 228 P2A [QJUH]	39525	39600	+	His	GTG	[ENA]	○
>W1911681340	QJUI01000019	Gammaproteobacteria	Pseudomonas daroniae P9A [QJUI]	63909	63834	-	His	GTG	[ENA]	○
>W1911681387	QJUJ01000007	Gammaproteobacteria	Pseudomonas daroniae P18A [QJUJ]	116114	116189	+	His	GTG	[ENA]	○
>W1911681449	QJUK01000017	Gammaproteobacteria	Pseudomonas daroniae P23A [QJUK]	39528	39603	+	His	GTG	[ENA]	○
>W1911681507	QJUL01000043	Gammaproteobacteria	Pseudomonas dryadis P6B [QJUL]	11265	11190	-	His	GTG	[ENA]	○
>W1911681567	QJUM01000026	Gammaproteobacteria	Pseudomonas dryadis P26B [QJUM]	88356	88431	+	His	GTG	[ENA]	○
>W1911681623	QJUN01000027	Gammaproteobacteria	Pseudomonas sp. FRB 230 P27B [QJUN]	11264	11189	-	His	GTG	[ENA]	○
>W1911681652	QJUO01000007	Gammaproteobacteria	Stutzerimonas kirkiae P4C [QJUO]	87541	87616	+	His	GTG	[ENA]	○
>W1911681700	QJUP01000003	Gammaproteobacteria	Stutzerimonas kirkiae P17C [QJUP]	87561	87636	+	His	GTG	[ENA]	○
>W1911681755	QJUQ01000013	Gammaproteobacteria	Stutzerimonas kirkiae P28C [QJUQ]	25740	25665	-	His	GTG	[ENA]	○
>W1911681803	QJUR01000002	Gammaproteobacteria	Stutzerimonas kirkiae P30C [QJUR]	241892	241967	+	His	GTG	[ENA]	○
>W1810149420	PISM01000014	Gammaproteobacteria	Stutzerimonas kunmingensis BUN14 [PISM]	357122	357197	+	His	GTG	[ENA]	○
>W1810169392	PJJZ01000004	Gammaproteobacteria	Stutzerimonas stutzeri DSM 50227 [PJJZ]	475695	475770	+	His	GTG	[ENA]	○
>W1810224313	POUI01000004	Gammaproteobacteria	Stutzerimonas decontaminans ST27MN3 [POUI]	258801	258876	+	His	GTG	[ENA]	○
>W1810224379	POUJ01000004	Gammaproteobacteria	Stutzerimonas frequens DNSP21 [POUJ]	303207	303132	-	His	GTG	[ENA]	○
>W1810224426	POUK01000006	Gammaproteobacteria	Stutzerimonas degradans DSM 50238 [POUK]	130748	130673	-	His	GTG	[ENA]	○
>W1810224502	POUM01000002	Gammaproteobacteria	Stutzerimonas stutzeri CCUG 44592 [POUM]	60137	60062	-	His	GTG	[ENA]	○
>W1810224582	POUN01000004	Gammaproteobacteria	Stutzerimonas stutzeri KC [POUN]	469068	469143	+	His	GTG	[ENA]	○
>W1810224955	POUT01000004	Gammaproteobacteria	Stutzerimonas stutzeri 24a75 [POUT]	9163	9088	-	His	GTG	[ENA]	○
>W1810225039	POUV01000001	Gammaproteobacteria	Stutzerimonas kunmingensis CCUG 36651 [POUV]	382123	382198	+	His	GTG	[ENA]	○
>W1810242721	PPXG01000001	Gammaproteobacteria	Stutzerimonas stutzeri 24a13 [PPXG]	453659	453734	+	His	GTG	[ENA]	○
>W1810684842	QKYW01000003	Gammaproteobacteria	Pseudomonas sp. URMO17WK12:I2 [QKYW]	468199	468124	-	His	GTG	[ENA]	○
>W1810685096	QKZB01000001	Gammaproteobacteria	Pseudomonas sp. URMO17WK12:I1 [QKZB]	488928	489003	+	His	GTG	[ENA]	○
>W1810686231	QLAB01000001	Gammaproteobacteria	Stutzerimonas stutzeri CM [QLAB]	254641	254716	+	His	GTG	[ENA]	○
>W1810898529	QUZY01000005	Gammaproteobacteria	Stutzerimonas stutzeri ATCC 17587 [QUZY]	66650	66725	+	His	GTG	[ENA]	○
>C151026016	CP007509	Gammaproteobacteria	Stutzerimonas stutzeri 19SMN4 [CP007509]	2491352	2491277	-	His	GTG	[Ensembl]	○
>C151087055	CP011854	Gammaproteobacteria	Stutzerimonas stutzeri SLG510A3-8 [CP011854]	2471723	2471648	-	His	GTG	[Ensembl]	○
>W1510015240	BBQQ01000002	Gammaproteobacteria	Stutzerimonas degradans KF716 [BBQQ]	290319	290244	-	His	GTG	[ENA]	○
>W1510061169	CCYE01000014	Gammaproteobacteria	Stutzerimonas xanthomarina S11 [CCYE]	72609	72534	-	His	GTG	[ENA]	○
>WENV11100014	ADVT01005181	Freshwater metagenome, viral RNA fraction from lake water filtrate		50	125	+	His	GTG	[ENA]	○
>W1511187056	JMFZ01000007	Gammaproteobacteria	Stutzerimonas degradans HMP271 [JMFZ]	223359	223284	-	His	GTG	[ENA]	○
>C11117191	CP002727	Gammaproteobacteria	Pseudomonas fulva 12-X [CP002727]	2405851	2405926	+	His	GTG	[Ensembl]	○
>C11118029	CP002881	Gammaproteobacteria	Stutzerimonas stutzeri CGMCC 1.1803 [CP002881]	2069924	2069999	+	His	GTG	[Ensembl]	○
>C11118088	CP002622	Gammaproteobacteria	Stutzerimonas stutzeri DSM 4166 [CP002622]	2225768	2225843	+	His	GTG	[Ensembl]	○
>W1511429975	JUEC02000103	Gammaproteobacteria	[Pseudomonas] sp. BICA1-14 BICA1-14 [JUEC]	20463	20388	-	His	GTG	[ENA]	○
>W1511462632	JVNQ01000063	Gammaproteobacteria	Stutzerimonas stutzeri 267_PSTU [JVNQ]	17131	17056	-	His	GTG	[ENA]	○
>W1511471518	JVYC01000146	Gammaproteobacteria	Stutzerimonas stutzeri 1223_PMEN [JVYC]	44689	44764	+	His	GTG	[ENA]	○
>W1510327529	CLJU01000077	Bacillota	Streptococcus pneumoniae SMRU2535 [CLJU]	4330	4255	-	His	GTG	[ENA]	○
>W1511505155	JXJL01000016	Gammaproteobacteria	Stutzerimonas stutzeri ST-9 [JXJL]	24362	24287	-	His	GTG	[ENA]	○
>W1511509203	JXQW01000007	Gammaproteobacteria	Pseudomonas fulva MEJ086 [JXQW]	52431	52506	+	His	GTG	[ENA]	○
>W1511511871	JXTL01000024	Gammaproteobacteria	Stutzerimonas stutzeri NT0124 [JXTL]	129337	129412	+	His	GTG	[ENA]	○
>W1511517199	JXXD01000068	Gammaproteobacteria	Stutzerimonas stutzeri BAL361 [JXXD]	8073	8148	+	His	GTG	[ENA]	○
>W1511542159	JZHA01000012	Gammaproteobacteria	Stenotrophomonas maltophilia #19 [JZHA] #19 [JZHA]	54383	54458	+	His	GTG	[ENA]	○
>W1511564639	LADX01000147	Gammaproteobacteria	Pseudomonas sp. BRH_c35 [LADX]	5830	5905	+	His	GTG	[ENA]	○
>W1511642601	LDWB01000017	Gammaproteobacteria	Stutzerimonas stutzeri C2 [LDWB]	36579	36504	-	His	GTG	[ENA]	○
>C121014996	CP003677	Gammaproteobacteria	Stutzerimonas stutzeri CCUG 29243 [CP003677]	2295613	2295538	-	His	GTG	[Ensembl]	○
>W121017952	AGSL01000030	Gammaproteobacteria	Stutzerimonas stutzeri ATCC 14405 = CCUG 16156 [AGSL]	6201	6276	+	His	GTG	[ENA]	○
>W121070595	AJXE01000015	Gammaproteobacteria	Stutzerimonas stutzeri TS44 [AJXE]	70711	70636	-	His	GTG	[ENA]	○
>W121103056	AKYE01000096	Gammaproteobacteria	Stutzerimonas stutzeri XLDN-R [AKYE]	178601	178676	+	His	GTG	[ENA]	○
>W121111102	ALJB01000016	Gammaproteobacteria	Stutzerimonas stutzeri T13 [ALJB]	171446	171371	-	His	GTG	[ENA]	○
>C131001998	CP003071	Gammaproteobacteria	Stutzerimonas stutzeri RCH2 [CP003071]	2450763	2450688	-	His	GTG	[Ensembl]	○
>W1610679787	LKKM01000010	Gammaproteobacteria	Pseudomonas sp. TTU2014-105ASC [LKKM]	39048	39123	+	His	GTG	[ENA]	○
>W1610922499	LSVE01000023	Gammaproteobacteria	Stutzerimonas stutzeri [LSVE]	424073	424148	+	His	GTG	[ENA]	○
>W1610982802	LWEF01000575	Gammaproteobacteria	Stutzerimonas frequens stutzeri [LWEF]	156063	155988	-	His	GTG	[ENA]	○
>W1710075790	BCZZ01000017	Gammaproteobacteria	Pseudomonas flavescens NBRC 103044 [BCZZ]	144587	144662	+	His	GTG	[ENA]	○
>W1710515087	FNBM01000006	Gammaproteobacteria	Pseudomonas seleniipraecipitans [FNBM]	115075	115150	+	His	GTG	[ENA]	○
>W1710517374	FNDG01000016	Gammaproteobacteria	Pseudomonas flavescens [FNDG]	981	906	-	His	GTG	[ENA]	○
>W1710559365	FOMO01000005	Gammaproteobacteria	Pseudomonas straminea [FOMO]	426667	426592	-	His	GTG	[ENA]	○
>W1710565274	FORC01000004	Gammaproteobacteria	Pseudomonas argentinensis [FORC]	151980	152055	+	His	GTG	[ENA]	○
>W1710566049	FORS01000002	Gammaproteobacteria	Stutzerimonas kunmingensis [FORS]	373098	373173	+	His	GTG	[ENA]	○
>W1710591353	FRBQ01000005	Gammaproteobacteria	Pseudomonas punonensis [FRBQ]	33503	33578	+	His	GTG	[ENA]	○
Identical group No.586998 (1 seq.)
>WENV11100025	ADVT01009086	Freshwater metagenome, viral RNA fraction from lake water filtrate		394	319	-	His	GTG	[ENA]	○
Identical group No.597199 (1 seq.)
>WENV11100043	ADVU01003056	Freshwater metagenome, viral RNA fraction from lake water filtrate		212	137	-	Pseudo	GTG	[ENA]	○
Identical group No.816413 (1 seq.)
>WENV11100035	ADVT01013960	Freshwater metagenome, viral RNA fraction from lake water filtrate		551	478	-	His	GTG	[ENA]	○