tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = CAA

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.111661 (1 seq.)
>ENV09000380 ABSN01060875 Freshwater sediment metagenome lwFormaldehyde_C1 232 319 + Leu CAA [ENA] ¡û
Identical group No.115545 (37 seq.)
>W1710892477 LNDU01000034 Nitrospirota Nitrospira sp. Ga0074138 [LNDU] 285 371 + Leu CAA [ENA] ¡û
>WENV180283464 OBID01000162 [OBID] metagenome; sludge 27877 27963 + Leu CAA [ENA] ¢þ
>WENV181168150 OEIU01180689 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 337 423 + Leu CAA [ENA] ¢þ
>WENV181184913 OEKW01000077 [OEKW] metagenome; 1998 4996 5082 + Leu CAA [ENA] ¢þ
>WENV181185032 OELA01000314 [OELA] metagenome; 1998 30574 30660 + Leu CAA [ENA] ¢þ
>WENV181185191 OELE01000679 [OELE] metagenome; 1998 4121 4207 + Leu CAA [ENA] ¢þ
>WENV183724638 PJQE01038742 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 552 466 - Leu CAA [ENA] ¢þ
>WENV170551954 CXWJ01031847 [CXWJ] wastewater metagenome; activated sludge 739 653 - Leu CAA [ENA] ¢þ
>WENV170552242 CXWJ01048837 [CXWJ] wastewater metagenome; activated sludge 766 852 + Leu CAA [ENA] ¢þ
>WENV170552892 CXWK01003339 [CXWK] wastewater metagenome; activated sludge 22710 22796 + Leu CAA [ENA] ¢þ
>WENV170553166 CXWK01009685 [CXWK] wastewater metagenome; activated sludge 18425 18339 - Leu CAA [ENA] ¢þ
>WENV170555463 CXWL01000671 [CXWL] groundwater metagenome; biofilm material 12334 12420 + Leu CAA [ENA] ¢þ
>WENV170556048 CXWL01004161 [CXWL] groundwater metagenome; biofilm material 68 154 + Leu CAA [ENA] ¢þ
>WENV170556306 CXWL01006945 [CXWL] groundwater metagenome; biofilm material 10926 10840 - Leu CAA [ENA] ¢þ
>WENV170557325 CXWL01024179 [CXWL] groundwater metagenome; biofilm material 1068 982 - Leu CAA [ENA] ¢þ
>WENV170557677 CXWL01033743 [CXWL] groundwater metagenome; biofilm material 68 154 + Leu CAA [ENA] ¢þ
>WENV170557731 CXWL01035399 [CXWL] groundwater metagenome; biofilm material 2452 2538 + Leu CAA [ENA] ¢þ
>WENV170566133 FKKE01007388 [FKKE] freshwater metagenome; freshwater 5 91 + Leu CAA [ENA] ¢þ
>WENV170576620 FRDC01001116 [FRDC] freshwater metagenome; water 15583 15669 + Leu CAA [ENA] ¢þ
>WENV170576741 FRDC01001654 [FRDC] freshwater metagenome; water 34311 34225 - Leu CAA [ENA] ¢þ
>WENV170577897 FSSH01002483 [FSSH] freshwater metagenome; drinking water 53910 53996 + Leu CAA [ENA] ¢þ
>WENV170709592 LNFM01000508 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 71233 71147 - Leu CAA [ENA] ¢þ
>WENV170713444 LNFM01031602 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 4876 4962 + Leu CAA [ENA] ¢þ
>WENV170714566 LNFM01082145 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1331 1245 - Leu CAA [ENA] ¢þ
>W1910204722 FJVM02000017 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVM] 34311 34225 - Leu CAA [ENA] ¡û
>W1910204775 FJVN01000222 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVN] 5 91 + Leu CAA [ENA] ¡û
>W1910441953 FWEX01000005 Nitrospirota Nitrospira sp. ND1 [FWEX] 845006 844920 - Leu CAA [ENA] ¡û
>W1910731412 MHEN01000004 Nitrospirota Nitrospirae bacterium RBG_19FT_COMBO_58_9 [MHEN] 2596 2510 - Leu CAA [ENA] ¡û
>ENV09000385 ABSN01062412 Freshwater sediment metagenome lwFormaldehyde_C1 406 492 + Leu CAA [ENA] ¡û
>C10109744 FP929003 Nitrospirota Nitrospira defluvii [FP929003] 2699639 2699553 - Leu CAA [Ensembl] ¡û
>W1610121157 CZPZ01000010 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 53944 53858 - Leu CAA [ENA] ¡û
>W1610121210 CZQA01000009 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 163353 163267 - Leu CAA [ENA] ¡û
>W1610574670 JZQY01000050 Nitrospirota Nitrospira sp. OLB3 [JZQY] 118876 118790 - Leu CAA [ENA] ¡û
>W1610752743 LNDU01000034 Nitrospirota Nitrospira sp. Ga0074138 [LNDU] 285 371 + Leu CAA [ENA] ¡û
>W1710123861 CZPZ01000010 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 53944 53858 - Leu CAA [ENA] ¡û
>W1710123914 CZQA01000009 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 163353 163267 - Leu CAA [ENA] ¡û
>W1710691905 JZQY01000050 Nitrospirota Nitrospira sp. OLB3 [JZQY] 118876 118790 - Leu CAA [ENA] ¡û
Identical group No.133792 (11 seq.)
>WENV180256945 OBEQ010867112 [OBEQ] groundwater metagenome; groundwater 156196 156282 + Leu CAA [ENA] ¢þ
>WENV183702603 PDVI01007537 [PDVI] alkali sediment metagenome; glacial lake sediment 939 853 - Leu CAA [ENA] ¢þ
>WENV170555962 CXWL01003535 [CXWL] groundwater metagenome; biofilm material 5923 6009 + Leu CAA [ENA] ¢þ
>WENV170556043 CXWL01004071 [CXWL] groundwater metagenome; biofilm material 8534 8448 - Leu CAA [ENA] ¢þ
>WENV170556530 CXWL01010029 [CXWL] groundwater metagenome; biofilm material 7158 7072 - Leu CAA [ENA] ¢þ
>WENV170556740 CXWL01013006 [CXWL] groundwater metagenome; biofilm material 8293 8379 + Leu CAA [ENA] ¢þ
>WENV170556895 CXWL01015751 [CXWL] groundwater metagenome; biofilm material 2020 2106 + Leu CAA [ENA] ¢þ
>WENV170556896 CXWL01015752 [CXWL] groundwater metagenome; biofilm material 182 96 - Leu CAA [ENA] ¢þ
>WENV170577591 FSSH01000249 [FSSH] freshwater metagenome; drinking water 39586 39500 - Leu CAA [ENA] ¢þ
>W1911545238 OUNR01000020 Nitrospirota Nitrospira lenta [OUNR] 123032 122946 - Leu CAA [ENA] ¡û
>ENV09000353 ABSN01057369 Freshwater sediment metagenome lwFormaldehyde_C1 398 312 - Leu CAA [ENA] ¡û
Identical group No.152649 (1 seq.)
>ENV09000208 ABSN01030468 Freshwater sediment metagenome lwFormaldehyde_C1 479 565 + Leu CAA [ENA] ¡û
Identical group No.152656 (1 seq.)
>ENV09000411 ABSN01065838 Freshwater sediment metagenome lwFormaldehyde_C1 288 374 + Leu CAA [ENA] ¡û
Identical group No.179295 (1 seq.)
>ENV09000152 ABSN01019157 Freshwater sediment metagenome lwFormaldehyde_C1 338 256 - Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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