tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = CCG

HIT: 6 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.238027 (4 seq.)
>WENV180311425	OBJT01285126	[OBJT] soil metagenome; soil		161	239	+	Arg	CCG	[ENA]	◯
>WENV180354392	OBLQ011694559	[OBLQ] soil metagenome; soil		110	32	-	Arg	CCG	[ENA]	◯
>W1911809260	QYYE01000013	Unclassified	Candidatus Bathyarchaeota archaeon archaeon BE326-BA-RLH [QYYE]	19223	19301	+	Arg	CCG	[ENA]	○
>ENV09000021	ABSN01000764	Freshwater sediment metagenome lwFormaldehyde_C1		279	356	+	Arg	CCG	[ENA]	○
Identical group No.303412 (47 seq.)
>W1710892502	LNDU01000059	Nitrospirota	Nitrospira sp. Ga0074138 [LNDU]	44173	44097	-	Arg	CCG	[ENA]	○
>C171131400	LT828648	Nitrospirota	Nitrospira japonica [LT828648]	571025	571101	+	Arg	CCG	-	○
>WENV180038865	LLBY010009209	[LLBY] soil metagenome; soil from tomato rhizosphere		473	549	+	Arg	CCG	[ENA]	◯
>WENV180041237	LLBZ010070798	[LLBZ] soil metagenome; soil from tomato rhizosphere		77	1	-	Arg	CCG	[ENA]	◯
>WENV180249928	OBEQ010241101	[OBEQ] groundwater metagenome; groundwater		57711	57787	+	Arg	CCG	[ENA]	◯
>WENV180283427	OBID01000061	[OBID] metagenome; sludge		18050	18126	+	Arg	CCG	[ENA]	◯
>WENV180295079	OBIZ01017941	[OBIZ] soil metagenome; soil		1115	1039	-	Arg	CCG	[ENA]	◯
>WENV180352054	OBLQ010155489	[OBLQ] soil metagenome; soil		187	111	-	Arg	CCG	[ENA]	◯
>WENV180691244	OCZS010084250	[OCZS] soil metagenome; soil		177	101	-	Arg	CCG	[ENA]	◯
>WENV181184931	OEKW01000571	[OEKW] metagenome; 1998		2870	2946	+	Arg	CCG	[ENA]	◯
>WENV181185169	OELE01000045	[OELE] metagenome; 1998		2251	2175	-	Arg	CCG	[ENA]	◯
>WENV181188534	OEOE01181818	[OEOE] activated sludge metagenome; Activated Sludge		161	237	+	Arg	CCG	[ENA]	◯
>WENV181386142	OFRL01000888	[OFRL] wastewater metagenome; Lake Maggiore Cannobio		8917	8841	-	Arg	CCG	[ENA]	◯
>WENV183692403	ORMF011910626	[ORMF] groundwater metagenome; groundwater		531	607	+	Arg	CCG	[ENA]	◯
>WENV183702661	PDVI01015435	[PDVI] alkali sediment metagenome; glacial lake sediment		421	345	-	Arg	CCG	[ENA]	◯
>WENV170551297	CXWJ01003356	[CXWJ] wastewater metagenome; activated sludge		1990	2066	+	Arg	CCG	[ENA]	◯
>WENV170551869	CXWJ01026985	[CXWJ] wastewater metagenome; activated sludge		2424	2500	+	Arg	CCG	[ENA]	◯
>WENV170552787	CXWK01002033	[CXWK] wastewater metagenome; activated sludge		30947	30871	-	Arg	CCG	[ENA]	◯
>WENV170556110	CXWL01004929	[CXWL] groundwater metagenome; biofilm material		1346	1270	-	Arg	CCG	[ENA]	◯
>WENV170556112	CXWL01004973	[CXWL] groundwater metagenome; biofilm material		894	970	+	Arg	CCG	[ENA]	◯
>WENV170556131	CXWL01005072	[CXWL] groundwater metagenome; biofilm material		17358	17282	-	Arg	CCG	[ENA]	◯
>WENV170556219	CXWL01005726	[CXWL] groundwater metagenome; biofilm material		103148	103224	+	Arg	CCG	[ENA]	◯
>WENV170556816	CXWL01014469	[CXWL] groundwater metagenome; biofilm material		1275	1199	-	Arg	CCG	[ENA]	◯
>WENV170556893	CXWL01015717	[CXWL] groundwater metagenome; biofilm material		982	906	-	Arg	CCG	[ENA]	◯
>WENV170557157	CXWL01020331	[CXWL] groundwater metagenome; biofilm material		5796	5872	+	Arg	CCG	[ENA]	◯
>WENV170565841	FKKE01001306	[FKKE] freshwater metagenome; freshwater		187	111	-	Arg	CCG	[ENA]	◯
>WENV170576628	FRDC01001162	[FRDC] freshwater metagenome; water		201	125	-	Arg	CCG	[ENA]	◯
>WENV170576655	FRDC01001296	[FRDC] freshwater metagenome; water		6846	6770	-	Arg	CCG	[ENA]	◯
>WENV170577337	FRDC01004613	[FRDC] freshwater metagenome; water		197	121	-	Arg	CCG	[ENA]	◯
>WENV170577598	FSSH01000254	[FSSH] freshwater metagenome; drinking water		119336	119260	-	Arg	CCG	[ENA]	◯
>WENV170578037	FSSH01006946	[FSSH] freshwater metagenome; drinking water		3902	3826	-	Arg	CCG	[ENA]	◯
>WENV170710020	LNFM01001073	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		19632	19708	+	Arg	CCG	[ENA]	◯
>WENV170712088	LNFM01009729	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		2782	2858	+	Arg	CCG	[ENA]	◯
>WENV170714960	LNFM01119539	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		79	3	-	Arg	CCG	[ENA]	◯
>W1910441977	FWEX01000006	Nitrospirota	Nitrospira sp. ND1 [FWEX]	2189939	2189863	-	Arg	CCG	[ENA]	○
>W1910731431	MHEN01000135	Nitrospirota	Nitrospirae bacterium RBG_19FT_COMBO_58_9 [MHEN]	3714	3638	-	Arg	CCG	[ENA]	○
>W1911545224	OUNR01000012	Nitrospirota	Nitrospira lenta [OUNR]	537114	537038	-	Arg	CCG	[ENA]	○
>SRA1002251	SRR001308.328243	Metagenomic characterization of a wastewater treatment plant (SRP000180)		80	4	-	Arg	CCG	[SRA]
>C151086603	CP011801	Nitrospirota	Nitrospira moscoviensis NSP M-1 [CP011801]	4096615	4096691	+	Arg	CCG	-	○
>ENV09000285	ABSN01044415	Freshwater sediment metagenome lwFormaldehyde_C1		633	709	+	Arg	CCG	[ENA]	○
>C10109733	FP929003	Nitrospirota	Nitrospira defluvii [FP929003]	4004519	4004595	+	Arg	CCG	[Ensembl]	○
>C161107297	LN885086	Nitrospirota	Candidatus Nitrospira inopinata [LN885086]	731694	731618	-	Arg	CCG	[Ensembl]	○
>W1610121153	CZPZ01000009	Nitrospirota	Candidatus Nitrospira nitrificans [CZPZ]	22648	22724	+	Arg	CCG	[ENA]	○
>W1610121185	CZQA01000001	Nitrospirota	Candidatus Nitrospira nitrosa [CZQA]	1004369	1004445	+	Arg	CCG	[ENA]	○
>W1610752768	LNDU01000059	Nitrospirota	Nitrospira sp. Ga0074138 [LNDU]	44173	44097	-	Arg	CCG	[ENA]	○
>W1710123857	CZPZ01000009	Nitrospirota	Candidatus Nitrospira nitrificans [CZPZ]	22648	22724	+	Arg	CCG	[ENA]	○
>W1710123889	CZQA01000001	Nitrospirota	Candidatus Nitrospira nitrosa [CZQA]	1004369	1004445	+	Arg	CCG	[ENA]	○
Identical group No.323970 (17 seq.)
>WENV181379874	OFRD01012401	[OFRD] wastewater metagenome; Exp Tend CN 100WW		750	674	-	Arg	CCG	[ENA]	◯
>WENV181400590	OFSF01012117	[OFSF] wastewater metagenome; Exp Tend VB 100WW		655	731	+	Arg	CCG	[ENA]	◯
>WENV170602741	FUWD010261071	[FUWD] metagenome; unknown		268	192	-	Arg	CCG	[ENA]	◯
>WENV170705968	LNAP01000722	[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		1249	1173	-	Arg	CCG	[ENA]	◯
>W141819345	JQMG01000001	Betaproteobacteria	Methylotenera sp. L2L1 [JQMG]	379230	379306	+	Arg	CCG	[ENA]	○
>C09107816	CP001672	Betaproteobacteria	Methylotenera mobilis JLW8 [CP001672]	519535	519459	-	Arg	CCG	[Ensembl]	○
>W1911623976	PQVH01000001	Betaproteobacteria	Methylotenera oryzisoli La3113 [PQVH]	169751	169827	+	Arg	CCG	[ENA]	○
>ENV09000010	ABSN01000384	Freshwater sediment metagenome lwFormaldehyde_C1		767	843	+	Arg	CCG	[ENA]	○
>ENV09001333	ABSR01001933	Freshwater sediment metagenome lwMethylamine_C1		728	652	-	Arg	CCG	[ENA]	○
>ENV09001378	ABSR01004001	Freshwater sediment metagenome lwMethylamine_C1		383	307	-	Arg	CCG	[ENA]	○
>ENV09001379	ABSR01004019	Freshwater sediment metagenome lwMethylamine_C1		3119	3195	+	Arg	CCG	[ENA]	○
>ENV09001403	ABSR01005518	Freshwater sediment metagenome lwMethylamine_C1		922	846	-	Arg	CCG	[ENA]	○
>ENV09001409	ABSR01005644	Freshwater sediment metagenome lwMethylamine_C1		1382	1306	-	Arg	CCG	[ENA]	○
>ENV09001435	ABSR01007243	Freshwater sediment metagenome lwMethylamine_C1		1647	1723	+	Arg	CCG	[ENA]	○
>WENV058276	AACY023323276	Marine microbial communities from Global Ocean Sampling (GOS)		103	181	+	Arg	CCG	[ENA]
>WENV058294	AACY023323662	Marine microbial communities from Global Ocean Sampling (GOS)		493	415	-	Arg	CCG	[ENA]
>WENV058860	AACY023344711	Marine microbial communities from Global Ocean Sampling (GOS)		1285	1207	-	Arg	CCG	[ENA]
Identical group No.425295 (2 seq.)
>WENV180354494	OBLQ011816214	[OBLQ] soil metagenome; soil		47	123	+	Arg	CCG	[ENA]	◯
>ENV09000448	ABSN01071397	Freshwater sediment metagenome lwFormaldehyde_C1		224	148	-	Arg	CCG	[ENA]	○
Identical group No.447048 (1 seq.)
>ENV09000450	ABSN01071479	Freshwater sediment metagenome lwFormaldehyde_C1		48	124	+	Arg	CCG	[ENA]	○
Identical group No.656736 (44 seq.)
>W1711503721	MKTW01000001	Bacteroidota	Sphingobacteriales bacterium 44-61 [MKTW]	672797	672871	+	Arg	CCG	[ENA]	○
>W1711503823	MKTY01000024	Bacteroidota	Sphingobacteriales bacterium 46-32 [MKTY]	18108	18032	-	Arg	CCG	[ENA]	○
>W1711503877	MKUA01000012	Bacteroidota	Sphingobacteriales bacterium 48-107 [MKUA]	491443	491515	+	Arg	CCG	[ENA]	○
>W1711506212	MKWF01000022	Bacteroidota	Sphingobacteriales bacterium 40-81 [MKWF]	138760	138834	+	Arg	CCG	[ENA]	○
>W1711506264	MKWG01000021	Bacteroidota	Sphingobacteriales bacterium 44-15 [MKWG]	42501	42575	+	Arg	CCG	[ENA]	○
>W131170004	ARFF01000006	Bacteroidota	Niabella aurantiaca DSM 17617 [ARFF]	311357	311283	-	Arg	CCG	[ENA]	○
>W131225598	AUDS01000002	Bacteroidota	Terrimonas ferruginea DSM 30193 [AUDS]	242854	242782	-	Arg	CCG	[ENA]	○
>WENV180694809	OCZS012710475	[OCZS] soil metagenome; soil		92	164	+	Arg	CCG	[ENA]	◯
>WENV181168426	OEIU01354466	[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex		246	174	-	Arg	CCG	[ENA]	◯
>WENV181188549	OEOE01191249	[OEOE] activated sludge metagenome; Activated Sludge		117	189	+	Arg	CCG	[ENA]	◯
>WENV181193093	OEPS011441826	[OEPS] soil metagenome; soil		163	91	-	Arg	CCG	[ENA]	◯
>WENV181379185	OFRC01048080	[OFRC] wastewater metagenome; Exp Tend CN 10WW		95	23	-	Arg	CCG	[ENA]	◯
>WENV181401980	OFTY01000012	[OFTY] sludge metagenome; sludge		232791	232864	+	Arg	CCG	[ENA]	◯
>WENV181402361	OFTY01000791	[OFTY] sludge metagenome; sludge		7517	7589	+	Arg	CCG	[ENA]	◯
>WENV181846055	OGVX01018078	[OGVX] freshwater metagenome; freshwater		710	638	-	Arg	CCG	[ENA]	◯
>WENV181854614	OGWK01008788	[OGWK] freshwater metagenome; freshwater		675	603	-	Arg	CCG	[ENA]	◯
>WENV183726044	PJQF01067426	[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm		192	264	+	Arg	CCG	[ENA]	◯
>WENV183740713	PJUF01007321	[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips		2554	2480	-	Arg	CCG	[ENA]	◯
>WENV183743646	PJUJ01014167	[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment		59	131	+	Arg	CCG	[ENA]	◯
>WENV183744773	PJUL01000208	[PJUL] feces metagenome; Chicken feces enriched on filter paper		46101	46173	+	Arg	CCG	[ENA]	◯
>ENV08001668	ABNO01021040	coral metagenome; viral fraction from whole Porites compressa tissue extracts taken from a reduced pH stressor experiment that consisted of 5 liters of seawater with molecular grade HCl added to a final pH 68 that was changed every 24 hours; collected at 1 (n =9), 4 (n =9), 16 (n =9), and 64 (n =9) hours		91	17	-	Arg	CCG	[ENA]	○
>WENV170650568	JRYE01004384	[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO		2734	2660	-	Arg	CCG	[ENA]	◯
>WENV170987103	MWVX01123660	[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil		246	318	+	Arg	CCG	[ENA]	◯
>WENV170990404	MWWA01004673	[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil		2558	2630	+	Arg	CCG	[ENA]	◯
>WENV170990805	MWWA01047562	[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil		794	722	-	Arg	CCG	[ENA]	◯
>W09108598	ABTK01000001	Bacteroidota	Chitinophaga pinensis DSM 2588 [ABTK]	2991851	2991777	-	Arg	CCG	[ENA]	○
>W1910805101	MTKN01000021	Bacteroidota	[Flexibacter] sp. ATCC 35208 [MTKN]	92375	92303	-	Arg	CCG	[ENA]	○
>SRA1001683	SRR001081.17776	Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a reduced pH stressor experiment (SRP000169)		91	17	-	Arg	CCG	[SRA]
>W1810400805	PYGK01000001	Bacteroidota	Chitinophaga ginsengisoli DSM 18107 [PYGK]	770551	770623	+	Arg	CCG	[ENA]	○
>W1810533342	QCZJ01000016	Bacteroidota	Terrimonas sp. NS-102 [QCZJ]	90863	90791	-	Arg	CCG	[ENA]	○
>W1810586487	QFFK01000001	Bacteroidota	Chitinophaga deserti XJ-2 [QFFK]	776266	776340	+	Arg	CCG	[ENA]	○
>W1810608347	QGTG01000002	Bacteroidota	Chitinophaga sp. S165 [QGTG]	289461	289389	-	Arg	CCG	[ENA]	○
>W1810858525	QTJV01000003	Bacteroidota	Chitinophaga silvisoli K20C18050901 [QTJV]	18301	18373	+	Arg	CCG	[ENA]	○
>C151016371	CP007035	Bacteroidota	Niabella soli DSM 19437 JS13-8; DSM 19437 [CP007035]	1820182	1820256	+	Arg	CCG	[Ensembl]	○
>ENV09000320	ABSN01050000	Freshwater sediment metagenome lwFormaldehyde_C1		333	405	+	Arg	CCG	[ENA]	○
>WENV032894	AACY021482978	Marine microbial communities from Global Ocean Sampling (GOS)		438	512	+	Arg	CCG	[ENA]
>C10103719	CP001699	Bacteroidota	Chitinophaga pinensis DSM 2588 [CP001699]	1338290	1338364	+	Arg	CCG	[Ensembl]	○
>C161090537	CP015772	Bacteroidota	Niabella ginsenosidivorans BS26 [CP015772]	2894712	2894786	+	Arg	CCG	[Ensembl]	○
>W121017761	AGSA01000027	Bacteroidota	Niabella soli DSM 19437 [AGSA]	403920	403846	-	Arg	CCG	[ENA]	○
>W1710512664	FMZO01000002	Bacteroidota	Niabella drilacis [FMZO]	597090	597016	-	Arg	CCG	[ENA]	○
>W1710515132	FNBN01000004	Bacteroidota	Chitinophaga filiformis [FNBN]	335629	335555	-	Arg	CCG	[ENA]	○
>W1710570081	FOUX01000003	Bacteroidota	Chitinophaga sp. YR627 [FOUX]	870908	870982	+	Arg	CCG	[ENA]	○
>W1710580026	FPIZ01000033	Bacteroidota	Chitinophaga sancti [FPIZ]	56471	56397	-	Arg	CCG	[ENA]	○
>W1710592532	FRCN01000018	Bacteroidota	Chitinophaga sp. CF418 [FRCN]	139363	139435	+	Arg	CCG	[ENA]	○