tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = CGG

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.266132 (2 seq.)
>WENV170556040 CXWL01004029 [CXWL] groundwater metagenome; biofilm material 104438 104361 - Pro CGG [ENA] ¢þ
>ENV09000276 ABSN01042727 Freshwater sediment metagenome lwFormaldehyde_C1 531 454 - Pro CGG [ENA] ¡û
Identical group No.269640 (1 seq.)
>ENV09000050 ABSN01002272 Freshwater sediment metagenome lwFormaldehyde_C1 1271 1196 - Pro CGG [ENA] ¡û
Identical group No.306239 (11 seq.)
>WENV180253728 OBEQ010570716 [OBEQ] groundwater metagenome; groundwater 905 829 - Pro CGG [ENA] ¢þ
>WENV180259973 OBEQ011157739 [OBEQ] groundwater metagenome; groundwater 1025 949 - Pro CGG [ENA] ¢þ
>WENV180691145 OCZS010067595 [OCZS] soil metagenome; soil 1206 1130 - Pro CGG [ENA] ¢þ
>WENV181185463 OELN01001023 [OELN] metagenome; 1998 49 125 + Pro CGG [ENA] ¢þ
>WENV183671549 ORJL011073965 [ORJL] groundwater metagenome; groundwater 1983 1907 - Pro CGG [ENA] ¢þ
>WENV183680621 ORMF010205421 [ORMF] groundwater metagenome; groundwater 2738 2662 - Pro CGG [ENA] ¢þ
>WENV183691703 ORMF011805037 [ORMF] groundwater metagenome; groundwater 152 76 - Pro CGG [ENA] ¢þ
>WENV183749936 PPFU01235871 [PPFU] hypolithon metagenome; Antarctic Hypolithon 225 149 - Pro CGG [ENA] ¢þ
>WENV170988741 MWVY01001634 [MWVY] soil metagenome; MS7-5 sample; Antarctic (ecotone) soil 2217 2293 + Pro CGG [ENA] ¢þ
>ENV09000266 ABSN01041228 Freshwater sediment metagenome lwFormaldehyde_C1 347 423 + Pro CGG [ENA] ¡û
>WENV077585 AAFX01066624 Soil microbial communities from Minnesota Farm 97 175 + Pro CGG [ENA]
Identical group No.307265 (4 seq.)
>W131180913 ARNM01000049 Gammaproteobacteria Solimonas variicoloris DSM 15731 [ARNM] 316785 316861 + Pro CGG [ENA] ¡û
>W131228328 AUFV01000014 Gammaproteobacteria Solimonas flava DSM 18980 [AUFV] 105030 105106 + Pro CGG [ENA] ¡û
>WENV170557302 CXWL01023538 [CXWL] groundwater metagenome; biofilm material 837 913 + Pro CGG [ENA] ¢þ
>ENV09000079 ABSN01006472 Freshwater sediment metagenome lwFormaldehyde_C1 571 495 - Pro CGG [ENA] ¡û
Identical group No.323836 (5 seq.)
>WENV170972217 MTKX01023286 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1034 1110 + Pro CGG [ENA] ¢þ
>WENV170973810 MTKY01051053 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2030 1954 - Pro CGG [ENA] ¢þ
>WENV170977711 MTKZ01029793 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 587 511 - Pro CGG [ENA] ¢þ
>WENV170979710 MTKZ01103489 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 266 190 - Pro CGG [ENA] ¢þ
>ENV09000416 ABSN01065981 Freshwater sediment metagenome lwFormaldehyde_C1 189 265 + Pro CGG [ENA] ¡û
Identical group No.447003 (1 seq.)
>ENV09000041 ABSN01001974 Freshwater sediment metagenome lwFormaldehyde_C1 1010 1086 + Pro CGG [ENA] ¡û
Identical group No.648288 (1 seq.)
>ENV09000245 ABSN01037110 Freshwater sediment metagenome lwFormaldehyde_C1 225 150 - Pro CGG [ENA] ¡û
Identical group No.648291 (1 seq.)
>ENV09000263 ABSN01040567 Freshwater sediment metagenome lwFormaldehyde_C1 663 589 - Pro CGG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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