tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = GAC

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.287805 (29 seq.)
>W1711409310 MGOC01000071 Chloroflexota Chloroflexi bacterium RBG_16_69_14 [MGOC] 24378 24302 - Val GAC [ENA] ¡û
>WENV180038675 LLBY010001671 [LLBY] soil metagenome; soil from tomato rhizosphere 4677 4751 + Val GAC [ENA] ¢þ
>WENV180039089 LLBY010026233 [LLBY] soil metagenome; soil from tomato rhizosphere 2841 2917 + Val GAC [ENA] ¢þ
>WENV180039090 LLBY010026234 [LLBY] soil metagenome; soil from tomato rhizosphere 952 1028 + Val GAC [ENA] ¢þ
>WENV180041238 LLBZ010070906 [LLBZ] soil metagenome; soil from tomato rhizosphere 75 1 - Val GAC [ENA] ¢þ
>WENV180291281 OBIV01030531 [OBIV] soil metagenome; Clay 387 463 + Val GAC [ENA] ¢þ
>WENV180304268 OBJH01194294 [OBJH] soil metagenome; soil 98 22 - Val GAC [ENA] ¢þ
>WENV180308709 OBJR01133982 [OBJR] soil metagenome; soil 218 294 + Val GAC [ENA] ¢þ
>WENV180320545 OBKO01083909 [OBKO] soil metagenome; Alaskan Permafrost 58 134 + Val GAC [ENA] ¢þ
>WENV180320824 OBKQ01027922 [OBKQ] soil metagenome; Clay 212 136 - Val GAC [ENA] ¢þ
>WENV180327364 OBKT01079363 [OBKT] soil metagenome; soil 126 50 - Val GAC [ENA] ¢þ
>WENV180331367 OBLA01016234 [OBLA] soil metagenome; Alaskan Permafrost 115 191 + Val GAC [ENA] ¢þ
>WENV180342927 OBLJ01200210 [OBLJ] soil metagenome; Clay 187 111 - Val GAC [ENA] ¢þ
>WENV180344368 OBLK01368714 [OBLK] soil metagenome; Clay 87 11 - Val GAC [ENA] ¢þ
>WENV180352917 OBLQ010436327 [OBLQ] soil metagenome; soil 170 94 - Val GAC [ENA] ¢þ
>WENV180692482 OCZS010564658 [OCZS] soil metagenome; soil 175 99 - Val GAC [ENA] ¢þ
>WENV181165925 OEIS01295784 [OEIS] soil metagenome; soil 158 82 - Val GAC [ENA] ¢þ
>WENV181168373 OEIU01313717 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 264 188 - Val GAC [ENA] ¢þ
>WENV181184460 OEKD01000216 [OEKD] metagenome; 1998 16426 16502 + Val GAC [ENA] ¢þ
>WENV181184517 OEKI01000179 [OEKI] metagenome; 1998 821 897 + Val GAC [ENA] ¢þ
>WENV181298327 OFHL01079326 [OFHL] soil metagenome; Clay 241 165 - Val GAC [ENA] ¢þ
>WENV183749015 PPFU01108327 [PPFU] hypolithon metagenome; Antarctic Hypolithon 645 569 - Val GAC [ENA] ¢þ
>WENV183749283 PPFU01146824 [PPFU] hypolithon metagenome; Antarctic Hypolithon 1590 1514 - Val GAC [ENA] ¢þ
>WENV170954782 MJUI01057080 [MJUI] soil metagenome; viral particles from soil sample MG3 82 158 + Val GAC [ENA] ¢þ
>ENV09000176 ABSN01023567 Freshwater sediment metagenome lwFormaldehyde_C1 841 765 - Val GAC [ENA] ¡û
>ENV09000623 ABSP01003610 Freshwater sediment metagenome lwMethane_C1 22 98 + Val GAC [ENA] ¡û
>W1610594054 LDXM01000006 Chloroflexota Chloroflexi bacterium CSP1-4 [LDXM] 42124 42048 - Val GAC [ENA] ¡û
>WENV077562 AAFX01062326 Soil microbial communities from Minnesota Farm 210 134 - Val GAC [ENA]
>W1710713506 LDXM01000006 Chloroflexota Chloroflexi bacterium CSP1-4 [LDXM] 42124 42048 - Val GAC [ENA] ¡û
Identical group No.447006 (1 seq.)
>ENV09000058 ABSN01002542 Freshwater sediment metagenome lwFormaldehyde_C1 1311 1387 + Val GAC [ENA] ¡û
Identical group No.735930 (8 seq.)
>WENV180296029 OBIZ01579501 [OBIZ] soil metagenome; soil 67 141 + Val GAC [ENA] ¢þ
>WENV180351206 OBLQ010033105 [OBLQ] soil metagenome; soil 1419 1345 - Val GAC [ENA] ¢þ
>WENV170556223 CXWL01005754 [CXWL] groundwater metagenome; biofilm material 5383 5309 - Val GAC [ENA] ¢þ
>WENV170557055 CXWL01018018 [CXWL] groundwater metagenome; biofilm material 2469 2395 - Val GAC [ENA] ¢þ
>WENV170557098 CXWL01019046 [CXWL] groundwater metagenome; biofilm material 351 425 + Val GAC [ENA] ¢þ
>WENV170557099 CXWL01019047 [CXWL] groundwater metagenome; biofilm material 1118 1044 - Val GAC [ENA] ¢þ
>WENV170557659 CXWL01033262 [CXWL] groundwater metagenome; biofilm material 1879 1953 + Val GAC [ENA] ¢þ
>ENV09000167 ABSN01022130 Freshwater sediment metagenome lwFormaldehyde_C1 170 244 + Val GAC [ENA] ¡û
Identical group No.760524 (3 seq.)
>WENV170557991 CXWL01045491 [CXWL] groundwater metagenome; biofilm material 1989 2063 + Val GAC [ENA] ¢þ
>WENV170558392 CXWL01067306 [CXWL] groundwater metagenome; biofilm material 29 103 + Val GAC [ENA] ¢þ
>ENV09000150 ABSN01018754 Freshwater sediment metagenome lwFormaldehyde_C1 563 637 + Val GAC [ENA] ¡û
Identical group No.776245 (1 seq.)
>ENV09000396 ABSN01063372 Freshwater sediment metagenome lwFormaldehyde_C1 554 480 - Val GAC [ENA] ¡û
Identical group No.835755 (1 seq.)
>ENV09000230 ABSN01034956 Freshwater sediment metagenome lwFormaldehyde_C1 643 713 + Val GAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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