tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = GTG

HIT: 9 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.152657 (1 seq.)
>ENV09000425 ABSN01066742 Freshwater sediment metagenome lwFormaldehyde_C1 324 408 + His GTG [ENA] ¡û
Identical group No.339966 (18 seq.)
>W1711081823 LSTC01000110 Nitrospirota Nitrospira sp. SCGC AG-212-E16 [LSTC] 220 144 - His GTG [ENA] ¡û
>WENV180249889 OBEQ010238782 [OBEQ] groundwater metagenome; groundwater 129712 129636 - His GTG [ENA] ¢þ
>WENV180283548 OBID01000641 [OBID] metagenome; sludge 10823 10747 - His GTG [ENA] ¢þ
>WENV180584019 OCNM01028478 [OCNM] soil metagenome; soil 146 222 + His GTG [ENA] ¢þ
>WENV181184926 OEKW01000476 [OEKW] metagenome; 1998 15985 16061 + His GTG [ENA] ¢þ
>WENV181185181 OELE01000353 [OELE] metagenome; 1998 4863 4939 + His GTG [ENA] ¢þ
>WENV183684575 ORMF010725372 [ORMF] groundwater metagenome; groundwater 251 175 - His GTG [ENA] ¢þ
>WENV170553322 CXWK01014728 [CXWK] wastewater metagenome; activated sludge 8529 8453 - His GTG [ENA] ¢þ
>WENV170555596 CXWL01001297 [CXWL] groundwater metagenome; biofilm material 99391 99467 + His GTG [ENA] ¢þ
>WENV170556109 CXWL01004918 [CXWL] groundwater metagenome; biofilm material 85 9 - His GTG [ENA] ¢þ
>WENV170556741 CXWL01013007 [CXWL] groundwater metagenome; biofilm material 544 468 - His GTG [ENA] ¢þ
>WENV170556776 CXWL01013519 [CXWL] groundwater metagenome; biofilm material 15410 15486 + His GTG [ENA] ¢þ
>WENV170974829 MTKY01076780 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 906 982 + His GTG [ENA] ¢þ
>W1910441966 FWEX01000006 Nitrospirota Nitrospira sp. ND1 [FWEX] 2034567 2034643 + His GTG [ENA] ¡û
>ENV09000040 ABSN01001947 Freshwater sediment metagenome lwFormaldehyde_C1 166 242 + His GTG [ENA] ¡û
>ENV09001020 ABSQ01017169 Freshwater sediment metagenome lwMethenol_C1 218 142 - His GTG [ENA] ¡û
>C10109735 FP929003 Nitrospirota Nitrospira defluvii [FP929003] 4169103 4169027 - His GTG [Ensembl] ¡û
>W1610920658 LSTC01000110 Nitrospirota Nitrospira sp. SCGC AG-212-E16 [LSTC] 220 144 - His GTG [ENA] ¡û
Identical group No.447011 (1 seq.)
>ENV09000127 ABSN01014977 Freshwater sediment metagenome lwFormaldehyde_C1 746 821 + His GTG [ENA] ¡û
Identical group No.447021 (1 seq.)
>ENV09000187 ABSN01026169 Freshwater sediment metagenome lwFormaldehyde_C1 611 687 + His GTG [ENA] ¡û
Identical group No.648275 (1 seq.)
>ENV09000192 ABSN01026835 Freshwater sediment metagenome lwFormaldehyde_C1 505 430 - His GTG [ENA] ¡û
Identical group No.648282 (1 seq.)
>ENV09000215 ABSN01031549 Freshwater sediment metagenome lwFormaldehyde_C1 100 25 - His GTG [ENA] ¡û
Identical group No.648301 (1 seq.)
>ENV09000331 ABSN01053497 Freshwater sediment metagenome lwFormaldehyde_C1 439 514 + His GTG [ENA] ¡û
Identical group No.711765 (3 seq.)
>WENV181369078 OFQN01020884 [OFQN] freshwater metagenome; Freshwater Lake 320 246 - His GTG [ENA] ¢þ
>C181078373 CP023276 Betaproteobacteria Polynucleobacter difficilis AM-8B5 [CP023276] 660138 660212 + His GTG - ¡û
>ENV09000392 ABSN01063059 Freshwater sediment metagenome lwFormaldehyde_C1 419 345 - His GTG [ENA] ¡û
Identical group No.729260 (3 seq.)
>WENV180034044 FTKM01244323 [FTKM] metagenome; soil 123 49 - His GTG [ENA] ¢þ
>WENV180344778 OBLL01183918 [OBLL] soil metagenome; soil 194 267 + His GTG [ENA] ¢þ
>ENV09000365 ABSN01058129 Freshwater sediment metagenome lwFormaldehyde_C1 312 238 - His GTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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