tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = TAC

HIT: 10 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.240986 (20 seq.)
>W1711120837 LUHG01000039 Bacteroidota Hydrotalea flava [LUHG] 39130 39207 + Val TAC [ENA] ¡û
>W1711385738 MEEN01000028 Bacteroidota Niastella sp. SCN 39-18 [MEEN] 81013 80938 - Val TAC [ENA] ¡û
>W1711503759 MKTX01000003 Bacteroidota Sphingobacteriales bacterium 39-19 [MKTX] 107519 107444 - Val TAC [ENA] ¡û
>WENV180100580 OAOO01011558 [OAOO] marine metagenome; ENVO:00002010 104 29 - Val TAC [ENA] ¢þ
>WENV180284181 OBID01019956 [OBID] metagenome; sludge 994 1069 + Val TAC [ENA] ¢þ
>WENV181169705 OEIV010007801 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 2339 2414 + Val TAC [ENA] ¢þ
>WENV183092319 OLKZ01000109 [OLKZ] soil metagenome; soil 129273 129198 - Val TAC [ENA] ¢þ
>WENV170009354 APMI01000104 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 1028224 1028301 + Val TAC [ENA] ¢þ
>WENV170010507 APMI01018975 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 13555 13480 - Val TAC [ENA] ¢þ
>WENV170551456 CXWJ01008304 [CXWJ] wastewater metagenome; activated sludge 1334 1257 - Val TAC [ENA] ¢þ
>WENV170558992 CXWL01104592 [CXWL] groundwater metagenome; biofilm material 1436 1359 - Val TAC [ENA] ¢þ
>WENV170650849 JRYE01030660 [JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO 2714 2789 + Val TAC [ENA] ¢þ
>SRA1047757 SRR035094.36008 454 Sequencing (SRP001815) 236 313 + Val TAC [SRA]
>ENV09000395 ABSN01063164 Freshwater sediment metagenome lwFormaldehyde_C1 276 201 - Val TAC [ENA] ¡û
>C161092535 CP015971 Bacteroidota Arachidicoccus sp. BS20 [CP015971] 3351929 3352004 + Val TAC [Ensembl] ¡û
>W1610503558 FLNP01000044 Bacteroidota Hydrotalea flava [FLNP] 4218 4295 + Val TAC [ENA] ¡û
>W1610503569 FLNQ01000020 Bacteroidota Hydrotalea flava [FLNQ] 9823 9746 - Val TAC [ENA] ¡û
>W1610503600 FLNR01000076 Bacteroidota Hydrotalea flava [FLNR] 4858 4781 - Val TAC [ENA] ¡û
>W1610503631 FLNT01000060 Bacteroidota Hydrotalea flava [FLNT] 10357 10280 - Val TAC [ENA] ¡û
>W1610932034 LUHG01000039 Bacteroidota Hydrotalea flava [LUHG] 39130 39207 + Val TAC [ENA] ¡û
Identical group No.252669 (17 seq.)
>A171006040 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 244166 244243 + Val TAC - ¡û
>WENV180041360 LLBZ010106558 [LLBZ] soil metagenome; soil from tomato rhizosphere 798 724 - Val TAC [ENA] ¢þ
>WENV180264694 OBEQ011594072 [OBEQ] groundwater metagenome; groundwater 1319 1395 + Val TAC [ENA] ¢þ
>WENV180372193 OBOI01042666 [OBOI] sediment metagenome; sediment 127 51 - Val TAC [ENA] ¢þ
>WENV183671662 ORJL011086527 [ORJL] groundwater metagenome; groundwater 14 90 + Val TAC [ENA] ¢þ
>WENV183674121 ORJL011350434 [ORJL] groundwater metagenome; groundwater 5870 5946 + Val TAC [ENA] ¢þ
>WENV183676908 ORJL011684225 [ORJL] groundwater metagenome; groundwater 14 90 + Val TAC [ENA] ¢þ
>WENV183679257 ORMF010035560 [ORMF] groundwater metagenome; groundwater 116 192 + Val TAC [ENA] ¢þ
>WENV183688015 ORMF011221738 [ORMF] groundwater metagenome; groundwater 3527 3451 - Val TAC [ENA] ¢þ
>WENV183688016 ORMF011221862 [ORMF] groundwater metagenome; groundwater 299 223 - Val TAC [ENA] ¢þ
>WENV170556729 CXWL01012827 [CXWL] groundwater metagenome; biofilm material 5056 4980 - Val TAC [ENA] ¢þ
>WENV170557093 CXWL01018917 [CXWL] groundwater metagenome; biofilm material 5260 5184 - Val TAC [ENA] ¢þ
>ENV09000184 ABSN01025922 Freshwater sediment metagenome lwFormaldehyde_C1 691 615 - Val TAC [ENA] ¡û
>W1610002166 AEGP01000047 Nitrososphaerota Candidatus Nitrosarchaeum limnium limnia SFB1 [AEGP] 850 774 - Val TAC [ENA] ¡û
>W1610003287 AFPU01000001 Nitrososphaerota Nitrosarchaeum koreense koreensis MY1 [AFPU] 134477 134551 + Val TAC [ENA] ¡û
>W1610004521 AHJG01000180 Nitrososphaerota Candidatus Nitrosarchaeum limnium limnia BG20 [AHJG] 37670 37746 + Val TAC [ENA] ¡û
>W1610027657 AVSQ01000002 Nitrososphaerota Candidatus Nitrosotenuis chungbukensis MY2 [AVSQ] 140992 140916 - Val TAC [ENA] ¡û
Identical group No.478481 (26 seq.)
>WENV180295869 OBIZ01403727 [OBIZ] soil metagenome; soil 157 82 - Val TAC [ENA] ¢þ
>WENV180315083 OBKH01013441 [OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature 321 396 + Val TAC [ENA] ¢þ
>WENV180351327 OBLQ010044034 [OBLQ] soil metagenome; soil 1037 962 - Val TAC [ENA] ¢þ
>WENV181155595 OEID01274083 [OEID] soil metagenome; soil 101 176 + Val TAC [ENA] ¢þ
>WENV181165074 OEIR01563499 [OEIR] soil metagenome; soil 105 180 + Val TAC [ENA] ¢þ
>WENV170142932 CENY01038026 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 584 659 + Val TAC [ENA] ¢þ
>WENV170184770 CEOZ01138256 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 80 155 + Val TAC [ENA] ¢þ
>WENV170190274 CEPC01085308 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 55 130 + Val TAC [ENA] ¢þ
>WENV170228022 CEQF01174983 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 129 57 - Val TAC [ENA] ¢þ
>WENV170228697 CEQG01032986 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 566 494 - Val TAC [ENA] ¢þ
>WENV170348998 CETH01003226 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 553 628 + Val TAC [ENA] ¢þ
>WENV170355890 CETI01468724 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 904 979 + Val TAC [ENA] ¢þ
>WENV170364428 CETM01277166 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 140 65 - Val TAC [ENA] ¢þ
>WENV170417169 CEUL01231358 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 142 67 - Val TAC [ENA] ¢þ
>WENV170427505 CEUQ01177877 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 77 2 - Val TAC [ENA] ¢þ
>WENV170474677 CEVH01165300 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 140 65 - Val TAC [ENA] ¢þ
>WENV170490641 CEVQ01010379 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 623 551 - Val TAC [ENA] ¢þ
>WENV170518052 CEWE01084851 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2564 2489 - Val TAC [ENA] ¢þ
>WENV170845064 MDTA01017598 [MDTA] marine metagenome; seawater 3618 3693 + Val TAC [ENA] ¢þ
>WENV170891360 MDTD01022778 [MDTD] marine metagenome; seawater 24718 24643 - Val TAC [ENA] ¢þ
>WENV170903781 MDTE01003109 [MDTE] marine metagenome; seawater 52 127 + Val TAC [ENA] ¢þ
>WENV170929690 MDTG01154163 [MDTG] marine metagenome; seawater 8320 8395 + Val TAC [ENA] ¢þ
>WENV170934676 MDTG01242791 [MDTG] marine metagenome; seawater 1584 1659 + Val TAC [ENA] ¢þ
>ENV09000033 ABSN01001717 Freshwater sediment metagenome lwFormaldehyde_C1 230 155 - Val TAC [ENA] ¡û
>WENV039875 AACY022043255 Marine microbial communities from Global Ocean Sampling (GOS) 373 298 - Val TAC [ENA]
>WENV059936 AACY023380962 Marine microbial communities from Global Ocean Sampling (GOS) 459 534 + Val TAC [ENA]
Identical group No.620123 (3 seq.)
>W1810784127 QQZY01000004 Actinomycetota Gaiella occulta F2-233 [QQZY] 253904 253832 - Val TAC [ENA] ¡û
>ENV09000352 ABSN01057238 Freshwater sediment metagenome lwFormaldehyde_C1 454 529 + Val TAC [ENA] ¡û
>ENV09001509 ABSR01020683 Freshwater sediment metagenome lwMethylamine_C1 98 23 - Val TAC [ENA] ¡û
Identical group No.623600 (2 seq.)
>WENV180354949 OBNE01038155 [OBNE] groundwater metagenome; groundwater 238 163 - Val TAC [ENA] ¢þ
>ENV09000299 ABSN01047028 Freshwater sediment metagenome lwFormaldehyde_C1 270 345 + Val TAC [ENA] ¡û
Identical group No.648240 (1 seq.)
>ENV09000038 ABSN01001942 Freshwater sediment metagenome lwFormaldehyde_C1 1009 1084 + Val TAC [ENA] ¡û
Identical group No.648276 (1 seq.)
>ENV09000197 ABSN01027383 Freshwater sediment metagenome lwFormaldehyde_C1 294 219 - Val TAC [ENA] ¡û
Identical group No.648315 (1 seq.)
>ENV09000447 ABSN01070467 Freshwater sediment metagenome lwFormaldehyde_C1 588 516 - Val TAC [ENA] ¡û
Identical group No.776229 (1 seq.)
>ENV09000116 ABSN01013657 Freshwater sediment metagenome lwFormaldehyde_C1 712 641 - Val TAC [ENA] ¡û
Identical group No.776239 (1 seq.)
>ENV09000345 ABSN01056302 Freshwater sediment metagenome lwFormaldehyde_C1 528 602 + Val TAC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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