tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = TAG

HIT: 11 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.86491 (1 seq.)
>ENV09000370 ABSN01058727 Freshwater sediment metagenome lwFormaldehyde_C1 118 33 - Leu TAG [ENA] ¡û
Identical group No.150194 (2 seq.)
>WENV183681369 ORMF010297386 [ORMF] groundwater metagenome; groundwater 666 579 - Leu TAG [ENA] ¢þ
>ENV09000295 ABSN01046754 Freshwater sediment metagenome lwFormaldehyde_C1 271 354 + Leu TAG [ENA] ¡û
Identical group No.152644 (1 seq.)
>ENV09000078 ABSN01006449 Freshwater sediment metagenome lwFormaldehyde_C1 147 230 + Leu TAG [ENA] ¡û
Identical group No.154352 (11 seq.)
>W1711392195 MENI01000021 Bacteroidota Bacteroidetes bacterium GWA2_40_15 [MENI] 106831 106746 - Leu TAG [ENA] ¡û
>W1711392472 MENP01000114 Bacteroidota Bacteroidetes bacterium GWC2_40_22 [MENP] 58817 58732 - Leu TAG [ENA] ¡û
>W1711392844 MENZ01000170 Bacteroidota Bacteroidetes bacterium GWE2_41_25 [MENZ] 1423 1508 + Leu TAG [ENA] ¡û
>W1711393357 MEON01000150 Bacteroidota Bacteroidetes bacterium GWF2_41_9 [MEON] 67586 67501 - Leu TAG [ENA] ¡û
>WENV180311899 OBJT01674066 [OBJT] soil metagenome; soil 185 102 - Leu TAG [ENA] ¢þ
>WENV183702228 PDVH01027026 [PDVH] alkali sediment metagenome; glacial lake sediment 349 432 + Leu TAG [ENA] ¢þ
>WENV170641399 JFJP01036981 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 64237 64152 - Leu TAG [ENA] ¢þ
>WENV170642180 JFJP01039486 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4 89 + Leu TAG [ENA] ¢þ
>WENV170642428 JFJP01041068 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 8946 8861 - Leu TAG [ENA] ¢þ
>WENV170643390 JFJP01055082 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4 89 + Leu TAG [ENA] ¢þ
>ENV09000089 ABSN01006970 Freshwater sediment metagenome lwFormaldehyde_C1 809 724 - Leu TAG [ENA] ¡û
Identical group No.186005 (9 seq.)
>W1711421779 MHZV01000001 Betaproteobacteria Rhodocyclales bacterium GWA2_65_19 [MHZV] 41153 41237 + Leu TAG [ENA] ¡û
>WENV181188915 OEOE01475093 [OEOE] activated sludge metagenome; Activated Sludge 162 78 - Leu TAG [ENA] ¢þ
>WENV183674989 ORJL011456252 [ORJL] groundwater metagenome; groundwater 1093 1177 + Leu TAG [ENA] ¢þ
>WENV183689585 ORMF011462583 [ORMF] groundwater metagenome; groundwater 81341 81425 + Leu TAG [ENA] ¢þ
>WENV170705449 LNAO01000478 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 3945 3861 - Leu TAG [ENA] ¢þ
>WENV170705788 LNAP01000303 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 53440 53356 - Leu TAG [ENA] ¢þ
>W1910744068 MHZX01000026 Betaproteobacteria Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 [MHZX] 12593 12509 - Leu TAG [ENA] ¡û
>C151071216 CP010554 Betaproteobacteria Rugosibacter aromaticivorans Ca6 [CP010554] 1746514 1746430 - Leu TAG [Ensembl] ¡û
>ENV09000286 ABSN01044472 Freshwater sediment metagenome lwFormaldehyde_C1 547 631 + Leu TAG [ENA] ¡û
Identical group No.191097 (18 seq.)
>W131164726 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 790532 790616 + Leu TAG [ENA] ¡û
>W131186191 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 1953514 1953598 + Leu TAG [ENA] ¡û
>W131186550 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 224212 224296 + Leu TAG [ENA] ¡û
>WENV181187874 OEOE01000789 [OEOE] activated sludge metagenome; Activated Sludge 1270 1354 + Leu TAG [ENA] ¢þ
>WENV181379939 OFRD01015254 [OFRD] wastewater metagenome; Exp Tend CN 100WW 1154 1070 - Leu TAG [ENA] ¢þ
>WENV181845795 OGVX01009402 [OGVX] freshwater metagenome; freshwater 252 336 + Leu TAG [ENA] ¢þ
>WENV170558817 CXWL01093233 [CXWL] groundwater metagenome; biofilm material 91 7 - Leu TAG [ENA] ¢þ
>WENV170961464 MLJW01000057 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 52156 52240 + Leu TAG [ENA] ¢þ
>W141819362 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1921966 1922050 + Leu TAG [ENA] ¡û
>W1910730019 MHBU01000001 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 50227 50143 - Leu TAG [ENA] ¡û
>ENV09000137 ABSN01016812 Freshwater sediment metagenome lwFormaldehyde_C1 649 733 + Leu TAG [ENA] ¡û
>ENV09000957 ABSQ01002348 Freshwater sediment metagenome lwMethenol_C1 1058 974 - Leu TAG [ENA] ¡û
>ENV09001039 ABSQ01020873 Freshwater sediment metagenome lwMethenol_C1 216 132 - Leu TAG [ENA] ¡û
>ENV09001125 ABSQ01036370 Freshwater sediment metagenome lwMethenol_C1 176 92 - Leu TAG [ENA] ¡û
>ENV09001507 ABSR01020457 Freshwater sediment metagenome lwMethylamine_C1 581 497 - Leu TAG [ENA] ¡û
>ENV09001532 ABSR01024756 Freshwater sediment metagenome lwMethylamine_C1 616 532 - Leu TAG [ENA] ¡û
>ENV09001565 ABSR01030293 Freshwater sediment metagenome lwMethylamine_C1 130 46 - Leu TAG [ENA] ¡û
>C10109369 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 1717214 1717130 - Leu TAG [Ensembl] ¡û
Identical group No.217048 (1 seq.)
>ENV09000302 ABSN01047308 Freshwater sediment metagenome lwFormaldehyde_C1 46 130 + Leu TAG [ENA] ¡û
Identical group No.217050 (1 seq.)
>ENV09000329 ABSN01053021 Freshwater sediment metagenome lwFormaldehyde_C1 537 456 - Leu TAG [ENA] ¡û
Identical group No.228251 (1 seq.)
>ENV09000251 ABSN01038239 Freshwater sediment metagenome lwFormaldehyde_C1 444 364 - Leu TAG [ENA] ¡û
Identical group No.228652 (9 seq.)
>W1711573268 MNCT01000099 Nitrospirota Nitrospirae bacterium 13_2_20CM_62_7 [MNCT] 10217 10135 - Leu TAG [ENA] ¡û
>W1711573593 MNDM01000018 Nitrospirota Nitrospirae bacterium 13_2_20CM_2_62_8 [MNDM] 3733 3815 + Leu TAG [ENA] ¡û
>W1711574332 MNFF01000072 Nitrospirota Nitrospirae bacterium 13_1_40CM_4_62_6 [MNFF] 7528 7446 - Leu TAG [ENA] ¡û
>W1711575064 MNHD01000332 Nitrospirota Nitrospirae bacterium 13_1_40CM_2_62_10 [MNHD] 12540 12622 + Leu TAG [ENA] ¡û
>W1711575473 MNIP01000013 Nitrospirota Nitrospirae bacterium 13_1_20CM_4_62_6 [MNIP] 2797 2879 + Leu TAG [ENA] ¡û
>W1711575973 MNJY01000023 Nitrospirota Nitrospirae bacterium 13_1_20CM_2_62_14 [MNJY] 1543 1461 - Leu TAG [ENA] ¡û
>WENV180270578 OBEQ012185448 [OBEQ] groundwater metagenome; groundwater 314 232 - Leu TAG [ENA] ¢þ
>ENV09000250 ABSN01038199 Freshwater sediment metagenome lwFormaldehyde_C1 578 660 + Leu TAG [ENA] ¡û
>WENV061423 AACY023431489 Marine microbial communities from Global Ocean Sampling (GOS) 738 656 - Leu TAG [ENA]
Identical group No.232370 (1 seq.)
>ENV09000023 ABSN01001178 Freshwater sediment metagenome lwFormaldehyde_C1 619 540 - Leu TAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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