tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormate_C1

Anticodon = TAA

HIT: 3 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.114484 (27 seq.)
>W1710882953 LMVF01000053 Betaproteobacteria Cupriavidus necator [LMVF] 11830 11916 + Leu TAA [ENA] ¡û
>W1711167634 LVWN01000053 Betaproteobacteria Cupriavidus necator [LVWN] 11830 11916 + Leu TAA [ENA] ¡û
>W131156663 AQPZ01000059 Betaproteobacteria Cupriavidus sp. GA3-3 GA3-3 [AQPZ] 98104 98018 - Leu TAA [ENA] ¡û
>W131227472 AUFE01000010 Betaproteobacteria Cupriavidus sp. amp6 [AUFE] 75486 75400 - Leu TAA [ENA] ¡û
>C171067160 CP017757 Betaproteobacteria Cupriavidus necator NH9 [CP017757, CP017758] 2970637 2970723 + Leu TAA - ¡û
>C018451 AM260479 Betaproteobacteria Cupriavidus necator H16 [AM260479, AM260480] 2749388 2749474 + Leu TAA [Ensembl] ¡û
>C08008194 AM260479 Betaproteobacteria Cupriavidus necator H16 [AM260479, AM260480] 2749388 2749474 + Leu TAA [Ensembl] ¡û
>W141463949 JFJW01000055 Betaproteobacteria Cupriavidus sp. SK-4 [JFJW] 107505 107591 + Leu TAA [ENA] ¡û
>C191164565 CP039287 Betaproteobacteria Cupriavidus necator H16 [CP039287, CP039288] 2748646 2748732 + Leu TAA - ¡û
>W1910225292 FMSH01000038 Betaproteobacteria Cupriavidus necator B9 [FMSH] 21019 20933 - Leu TAA [ENA] ¡û
>C141006464 CP006667 Betaproteobacteria Ralstonia pickettii DTP0602 [CP006667, CP006668, CP006669] 3106384 3106470 + Leu TAA [Ensembl] ¡û
>W1910636894 LPWJ01000249 Betaproteobacteria Cupriavidus sp. UYMSc13B [LPWJ] 4066 4152 + Leu TAA [ENA] ¡û
>W1911532224 OGUS01000118 Betaproteobacteria Cupriavidus oxalaticus [OGUS] 72930 73016 + Leu TAA [ENA] ¡û
>W1810539961 QDHA01000034 Betaproteobacteria Cupriavidus necator CR12 [QDHA] 96997 96911 - Leu TAA [ENA] ¡û
>W1810596768 QGGT01000001 Betaproteobacteria Cupriavidus plantarum SLV-132 [QGGT] 688257 688171 - Leu TAA [ENA] ¡û
>W1810683941 QKWJ01000025 Betaproteobacteria Cupriavidus lacunae S23 [QKWJ] 231 145 - Leu TAA [ENA] ¡û
>W1810861199 QTTS01000001 Betaproteobacteria Cupriavidus plantarum MA1-2za [QTTS] 1415940 1416026 + Leu TAA [ENA] ¡û
>ENV09000469 ABSO01001916 Freshwater sediment metagenome lwFormate_C1 1559 1473 - Leu TAA [ENA] ¡û
>ENV09000563 ABSO01021483 Freshwater sediment metagenome lwFormate_C1 427 513 + Leu TAA [ENA] ¡û
>C11105753 CP002877 Betaproteobacteria Cupriavidus necator N-1 [CP002877, CP002878] 2508799 2508885 + Leu TAA [Ensembl] ¡û
>W1610053695 BBQI01000004 Betaproteobacteria Cupriavidus sp. D384 [BBQI] 27160 27246 + Leu TAA [ENA] ¡û
>W1610074304 BCWO01000014 Betaproteobacteria Cupriavidus oxalaticus NBRC 13593 [BCWO] 8168 8254 + Leu TAA [ENA] ¡û
>W1610077538 BCZN01000056 Betaproteobacteria Cupriavidus necator NBRC 102504 [BCZN] 12449 12535 + Leu TAA [ENA] ¡û
>W1610744879 LMVF01000053 Betaproteobacteria Cupriavidus necator [LMVF] 11830 11916 + Leu TAA [ENA] ¡û
>W1710050073 BBQI01000004 Betaproteobacteria Cupriavidus sp. D384 [BBQI] 27160 27246 + Leu TAA [ENA] ¡û
>W1710071422 BCWO01000014 Betaproteobacteria Cupriavidus oxalaticus NBRC 13593 [BCWO] 8168 8254 + Leu TAA [ENA] ¡û
>W1710075176 BCZN01000056 Betaproteobacteria Cupriavidus necator NBRC 102504 [BCZN] 12449 12535 + Leu TAA [ENA] ¡û
Identical group No.170919 (1 seq.)
>ENV09000489 ABSO01004806 Freshwater sediment metagenome lwFormate_C1 155 70 - Leu TAA [ENA] ¡û
Identical group No.205472 (4 seq.)
>WENV170554243 CXWK01055605 [CXWK] wastewater metagenome; activated sludge 6734 6818 + Leu TAA [ENA] ¢þ
>W1910744079 MHZX01000067 Betaproteobacteria Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 [MHZX] 33974 34058 + Leu TAA [ENA] ¡û
>C151000913 AP012547 Betaproteobacteria Sulfuritalea hydrogenivorans sk43H DSM 22779 [AP012547] 1603882 1603966 + Leu TAA [Ensembl] ¡û
>ENV09000540 ABSO01015694 Freshwater sediment metagenome lwFormate_C1 137 53 - Leu TAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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