tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = CAA

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.105991 (1 seq.)
>ENV09001249 ABSQ01055961 Freshwater sediment metagenome lwMethenol_C1 212 125 - Leu CAA [ENA] ¡û
Identical group No.134560 (10 seq.)
>W131163521 AQZU01000003 Gammaproteobacteria Methylovulum miyakonense HT12 [AQZU] 791425 791339 - Leu CAA [ENA] ¡û
>WENV180261422 OBEQ011292186 [OBEQ] groundwater metagenome; groundwater 3481 3395 - Leu CAA [ENA] ¢þ
>W141187108 AYLO01000094 Gammaproteobacteria Methyloglobulus morosus KoM1 [AYLO] 7608 7522 - Leu CAA [ENA] ¡û
>WENV183668586 ORJL010754891 [ORJL] groundwater metagenome; groundwater 614 528 - Leu CAA [ENA] ¢þ
>WENV183675395 ORJL011504231 [ORJL] groundwater metagenome; groundwater 7632 7718 + Leu CAA [ENA] ¢þ
>WENV183692078 ORMF011863102 [ORMF] groundwater metagenome; groundwater 1298 1212 - Leu CAA [ENA] ¢þ
>C181059024 CP022129 Gammaproteobacteria Methylovulum psychrotolerans HV10_M2 [CP022129] 2684686 2684772 + Leu CAA - ¡û
>W1810090409 PGFZ01000008 Gammaproteobacteria Methylovulum psychrotolerans Sph1 [PGFZ] 19112 19026 - Leu CAA [ENA] ¡û
>W1810296023 PTIY01000010 Gammaproteobacteria Methylobacter tundripaludum OWC-G53F [PTIY] 190685 190771 + Leu CAA [ENA] ¡û
>ENV09000987 ABSQ01010350 Freshwater sediment metagenome lwMethenol_C1 16 102 + Leu CAA [ENA] ¡û
Identical group No.143240 (1 seq.)
>ENV09001114 ABSQ01034558 Freshwater sediment metagenome lwMethenol_C1 627 541 - Leu CAA [ENA] ¡û
Identical group No.143242 (1 seq.)
>ENV09001140 ABSQ01037382 Freshwater sediment metagenome lwMethenol_C1 218 132 - Leu CAA [ENA] ¡û
Identical group No.173206 (1 seq.)
>ENV09001183 ABSQ01044401 Freshwater sediment metagenome lwMethenol_C1 567 484 - Leu CAA [ENA] ¡û
Identical group No.195911 (9 seq.)
>WENV180024838 FTIJ01114897 [FTIJ] metagenome; soil 61 145 + Leu CAA [ENA] ¢þ
>WENV180026433 FTIT01196511 [FTIT] metagenome; soil 476 560 + Leu CAA [ENA] ¢þ
>WENV170559927 CXWL01177520 [CXWL] groundwater metagenome; biofilm material 1410 1494 + Leu CAA [ENA] ¢þ
>W1810062409 PDOC01000002 Betaproteobacteria Massilia eurypsychrophila JCM 30074 [PDOC] 292726 292810 + Leu CAA [ENA] ¡û
>W1810068489 PDZM01000004 Betaproteobacteria Janthinobacterium sp. BJB312 [PDZM] 394460 394544 + Leu CAA [ENA] ¡û
>W1810068768 PDZP01000026 Betaproteobacteria Janthinobacterium sp. BJB412 [PDZP] 59290 59374 + Leu CAA [ENA] ¡û
>W1810069723 PEBS01000001 Betaproteobacteria Janthinobacterium sp. ROICE36 [PEBS] 233836 233920 + Leu CAA [ENA] ¡û
>ENV09001265 ABSQ01058060 Freshwater sediment metagenome lwMethenol_C1 789 705 - Leu CAA [ENA] ¡û
>W1710568775 FOTW01000004 Betaproteobacteria Rugamonas rubra [FOTW] 97664 97580 - Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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