tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = CAG

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.115489 (2 seq.)
>WENV181166312 OEIU01000072 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 28633 28717 + Leu CAG [ENA] ¢þ
>ENV09001019 ABSQ01016808 Freshwater sediment metagenome lwMethenol_C1 148 231 + Leu CAG [ENA] ¡û
Identical group No.128102 (3 seq.)
>WENV181384360 OFRI01000337 [OFRI] wastewater metagenome; Exp Tend VB 90WW 970 884 - Leu CAG [ENA] ¢þ
>WENV181399154 OFSE01012290 [OFSE] wastewater metagenome; Exp Tend VB 50WW 1379 1465 + Leu CAG [ENA] ¢þ
>ENV09001188 ABSQ01045220 Freshwater sediment metagenome lwMethenol_C1 650 736 + Leu CAG [ENA] ¡û
Identical group No.143243 (1 seq.)
>ENV09001174 ABSQ01043402 Freshwater sediment metagenome lwMethenol_C1 790 876 + Leu CAG [ENA] ¡û
Identical group No.170121 (4 seq.)
>WENV180254684 OBEQ010653314 [OBEQ] groundwater metagenome; groundwater 1125 1210 + Leu CAG [ENA] ¢þ
>WENV183686187 ORMF010962841 [ORMF] groundwater metagenome; groundwater 276 361 + Leu CAG [ENA] ¢þ
>WENV170649007 JRHI01004931 [JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced 3035 2950 - Leu CAG [ENA] ¢þ
>ENV09001147 ABSQ01039073 Freshwater sediment metagenome lwMethenol_C1 227 312 + Leu CAG [ENA] ¡û
Identical group No.173202 (1 seq.)
>ENV09001095 ABSQ01031599 Freshwater sediment metagenome lwMethenol_C1 274 357 + Leu CAG [ENA] ¡û
Identical group No.173205 (1 seq.)
>ENV09001138 ABSQ01037261 Freshwater sediment metagenome lwMethenol_C1 541 626 + Leu CAG [ENA] ¡û
Identical group No.182495 (37 seq.)
>W1710860992 LMDI01000001 Betaproteobacteria Rhizobacter sp. Root1221 [LMDI] 267508 267424 - Leu CAG [ENA] ¡û
>W1710893683 LNEZ01000095 Alphaproteobacteria Rhizobiales bacterium Ga0077548 [LNEZ] 21703 21787 + Leu CAG [ENA] ¡û
>W131178093 ARLH01000086 Betaproteobacteria Caldimonas manganoxidans ATCC BAA-369 [ARLH] 35742 35826 + Leu CAG [ENA] ¡û
>WENV180022998 FTHB01000478 [FTHB] metagenome; soil 15648 15564 - Leu CAG [ENA] ¢þ
>WENV180035625 FTLA01108396 [FTLA] metagenome; soil 557 641 + Leu CAG [ENA] ¢þ
>WENV180311754 OBJT01540706 [OBJT] soil metagenome; soil 110 194 + Leu CAG [ENA] ¢þ
>WENV180351377 OBLQ010050668 [OBLQ] soil metagenome; soil 773 857 + Leu CAG [ENA] ¢þ
>WENV181144918 OEHO01133311 [OEHO] metagenome; unknown 165 81 - Leu CAG [ENA] ¢þ
>WENV181311170 OFJB01000115 [OFJB] sludge metagenome; sludge 17290 17374 + Leu CAG [ENA] ¢þ
>WENV181368006 OFQE01001449 [OFQE] freshwater metagenome; Freshwater Lake 199 283 + Leu CAG [ENA] ¢þ
>WENV181401751 OFTX01004797 [OFTX] sludge metagenome; sludge 169 85 - Leu CAG [ENA] ¢þ
>WENV181414558 OGCL01000649 [OGCL] hot springs metagenome; Hot spring water 13854 13938 + Leu CAG [ENA] ¢þ
>WENV183680997 ORMF010249252 [ORMF] groundwater metagenome; groundwater 489 405 - Leu CAG [ENA] ¢þ
>WENV183693444 ORMF012081210 [ORMF] groundwater metagenome; groundwater 2975 3059 + Leu CAG [ENA] ¢þ
>WENV183702897 PDVJ01000641 [PDVJ] alkali sediment metagenome; glacial lake sediment 5339 5423 + Leu CAG [ENA] ¢þ
>WENV183703413 PDVJ01012932 [PDVJ] alkali sediment metagenome; glacial lake sediment 90 6 - Leu CAG [ENA] ¢þ
>WENV183703707 PDVJ01037078 [PDVJ] alkali sediment metagenome; glacial lake sediment 5 89 + Leu CAG [ENA] ¢þ
>WENV183703834 PDVJ01051666 [PDVJ] alkali sediment metagenome; glacial lake sediment 626 542 - Leu CAG [ENA] ¢þ
>WENV170002991 AGTN01188020 [AGTN] bioreactor metagenome; poplar biomass 341 257 - Leu CAG [ENA] ¢þ
>WENV170558868 CXWL01096669 [CXWL] groundwater metagenome; biofilm material 672 756 + Leu CAG [ENA] ¢þ
>WENV170586206 FUFK010377493 [FUFK] metagenome; unknown 361 445 + Leu CAG [ENA] ¢þ
>WENV170709836 LNFM01000790 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 10977 10893 - Leu CAG [ENA] ¢þ
>WENV170712034 LNFM01009304 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 8255 8171 - Leu CAG [ENA] ¢þ
>WENV170974630 MTKY01068776 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 623 539 - Leu CAG [ENA] ¢þ
>C191004280 AP018718 Betaproteobacteria Sulfuricystis multivorans J5B [AP018718] 669512 669596 + Leu CAG - ¡û
>C191007509 AP019373 Betaproteobacteria Sulfuricystis thermophila M52 [AP019373] 688127 688211 + Leu CAG - ¡û
>C191171932 CP039740 Alphaproteobacteria Pseudolabrys sp. FHR47 [CP039740] 298178 298262 + Leu CAG - ¡û
>W1910128397 BHVV01000008 Betaproteobacteria Sulfurisoma sediminicola BSN1 [BHVV] 580777 580861 + Leu CAG [ENA] ¡û
>C151104303 LN829118 Alphaproteobacteria Candidatus Filomicrobium marinum strain W [LN829118] 1612289 1612205 - Leu CAG [Ensembl] ¡û
>C151104349 LN829119 Alphaproteobacteria Candidatus Filomicrobium marinum Y [LN829119] 1612284 1612200 - Leu CAG [Ensembl] ¡û
>ENV09001201 ABSQ01048210 Freshwater sediment metagenome lwMethenol_C1 247 163 - Leu CAG [ENA] ¡û
>C161038406 CP011971 Gammaproteobacteria Steroidobacter denitrificans DSM 18526 [CP011971] 1046567 1046483 - Leu CAG [Ensembl] ¡û
>W1610074138 BCWK01000019 Betaproteobacteria Caldimonas taiwanensis NBRC 104434 [BCWK] 35098 35014 - Leu CAG [ENA] ¡û
>W1610723338 LMDI01000001 Betaproteobacteria Rhizobacter sp. Root1221 [LMDI] 267508 267424 - Leu CAG [ENA] ¡û
>W1610753949 LNEZ01000095 Alphaproteobacteria Rhizobiales bacterium Ga0077548 [LNEZ] 21703 21787 + Leu CAG [ENA] ¡û
>W1710071256 BCWK01000019 Betaproteobacteria Caldimonas taiwanensis NBRC 104434 [BCWK] 35098 35014 - Leu CAG [ENA] ¡û
>W1710524901 FNJC01000001 Alphaproteobacteria Filomicrobium insigne [FNJC] 602547 602631 + Leu CAG [ENA] ¡û
Identical group No.202047 (2 seq.)
>WENV181297778 OFHK01129218 [OFHK] soil metagenome; Clay 227 143 - Leu CAG [ENA] ¢þ
>ENV09001120 ABSQ01034972 Freshwater sediment metagenome lwMethenol_C1 112 28 - Leu CAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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