tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = CAT

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.280859 (26 seq.)
>WENV180059919 MPLX02139659 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 11735 11811 + Met CAT [ENA] ¢þ
>WENV180064999 MPLY02035683 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 9935 10011 + Met CAT [ENA] ¢þ
>WENV180067389 MPLY02198548 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 1520 1444 - Met CAT [ENA] ¢þ
>WENV180067711 MPLZ02010466 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 237213 237137 - Met CAT [ENA] ¢þ
>WENV180071875 MPLZ02268062 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 27953 28029 + Met CAT [ENA] ¢þ
>WENV180074503 MPMA02148017 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 11147 11223 + Met CAT [ENA] ¢þ
>WENV180075466 MPMA02211082 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 2432 2508 + Met CAT [ENA] ¢þ
>WENV180077760 MPMB02068611 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 4641 4717 + Met CAT [ENA] ¢þ
>WENV180080117 MPMB02207310 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 8099 8175 + Met CAT [ENA] ¢þ
>WENV180090453 MPMF02140343 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 237089 237013 - Met CAT [ENA] ¢þ
>WENV180093370 MPMF02316432 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 56416 56340 - Met CAT [ENA] ¢þ
>WENV180344304 OBLK01332709 [OBLK] soil metagenome; Clay 216 140 - Met CAT [ENA] ¢þ
>WENV180356004 OBNJ01016413 [OBNJ] sediment metagenome; sediment 380 304 - Met CAT [ENA] ¢þ
>WENV180691390 OCZS010112943 [OCZS] soil metagenome; soil 420 496 + Met CAT [ENA] ¢þ
>WENV183793469 PVBE010014789 [PVBE] marine metagenome; water 56416 56340 - Met CAT [ENA] ¢þ
>WENV183805905 PVBE011065066 [PVBE] marine metagenome; water 237086 237010 - Met CAT [ENA] ¢þ
>WENV170177179 CEOS01214256 [CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 78 + Met CAT [ENA] ¢þ
>WENV170203946 CEPS01097923 [CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1324 1248 - Met CAT [ENA] ¢þ
>WENV170209908 CEPV01092422 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5044 5120 + Met CAT [ENA] ¢þ
>WENV170225693 CEQE01147845 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1390 1466 + Met CAT [ENA] ¢þ
>WENV170388943 CETZ01177514 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 110 186 + Met CAT [ENA] ¢þ
>WENV170487907 CEVO01104903 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 364 288 - Met CAT [ENA] ¢þ
>WENV170875267 MDTC01018756 [MDTC] marine metagenome; seawater 691 615 - Met CAT [ENA] ¢þ
>WENV170878077 MDTC01069676 [MDTC] marine metagenome; seawater 128063 127987 - Met CAT [ENA] ¢þ
>WENV170991744 MWWA01306389 [MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil 105 181 + Met CAT [ENA] ¢þ
>ENV09001225 ABSQ01053493 Freshwater sediment metagenome lwMethenol_C1 427 503 + Met CAT [ENA] ¡û
Identical group No.303394 (53 seq.)
>W1710892506 LNDU01000063 Nitrospirota Nitrospira sp. Ga0074138 [LNDU] 16109 16185 + Met CAT [ENA] ¡û
>C171131424 LT828648 Nitrospirota Nitrospira japonica [LT828648] 3327200 3327124 - Met CAT - ¡û
>WENV180041039 LLBZ010036953 [LLBZ] soil metagenome; soil from tomato rhizosphere 220 296 + Ile2 CAT [ENA] ¢þ
>WENV180271110 OBEQ012236886 [OBEQ] groundwater metagenome; groundwater 66680 66604 - Ile2 CAT [ENA] ¢þ
>WENV180283405 OBID01000021 [OBID] metagenome; sludge 49703 49627 - Ile2 CAT [ENA] ¢þ
>WENV180351124 OBLQ010027174 [OBLQ] soil metagenome; soil 570 494 - Ile2 CAT [ENA] ¢þ
>WENV181184914 OEKW01000096 [OEKW] metagenome; 1998 2221 2145 - Ile2 CAT [ENA] ¢þ
>WENV181185057 OELA01000564 [OELA] metagenome; 1998 12126 12202 + Ile2 CAT [ENA] ¢þ
>WENV181185152 OELE01000011 [OELE] metagenome; 1998 9439 9363 - Ile2 CAT [ENA] ¢þ
>WENV181188420 OEOE01126728 [OEOE] activated sludge metagenome; Activated Sludge 96 172 + Ile2 CAT [ENA] ¢þ
>WENV181190136 OEOF01526862 [OEOF] activated sludge metagenome; Activated Sludge 23 99 + Ile2 CAT [ENA] ¢þ
>WENV181386090 OFRL01000563 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 5687 5763 + Ile2 CAT [ENA] ¢þ
>WENV183724535 PJQE01027173 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 378 302 - Ile2 CAT [ENA] ¢þ
>WENV170551784 CXWJ01023090 [CXWJ] wastewater metagenome; activated sludge 1940 2016 + Met CAT [ENA] ¢þ
>WENV170553203 CXWK01010886 [CXWK] wastewater metagenome; activated sludge 8855 8779 - Met CAT [ENA] ¢þ
>WENV170555516 CXWL01000878 [CXWL] groundwater metagenome; biofilm material 5808 5884 + Met CAT [ENA] ¢þ
>WENV170555878 CXWL01002844 [CXWL] groundwater metagenome; biofilm material 48584 48508 - Met CAT [ENA] ¢þ
>WENV170556341 CXWL01007372 [CXWL] groundwater metagenome; biofilm material 2464 2388 - Met CAT [ENA] ¢þ
>WENV170556719 CXWL01012602 [CXWL] groundwater metagenome; biofilm material 13229 13153 - Met CAT [ENA] ¢þ
>WENV170556803 CXWL01014186 [CXWL] groundwater metagenome; biofilm material 9 85 + Met CAT [ENA] ¢þ
>WENV170556923 CXWL01016272 [CXWL] groundwater metagenome; biofilm material 147449 147373 - Met CAT [ENA] ¢þ
>WENV170556982 CXWL01017080 [CXWL] groundwater metagenome; biofilm material 2714 2638 - Met CAT [ENA] ¢þ
>WENV170556983 CXWL01017081 [CXWL] groundwater metagenome; biofilm material 3454 3530 + Met CAT [ENA] ¢þ
>WENV170557197 CXWL01021177 [CXWL] groundwater metagenome; biofilm material 3915 3839 - Met CAT [ENA] ¢þ
>WENV170557225 CXWL01021747 [CXWL] groundwater metagenome; biofilm material 3338 3414 + Met CAT [ENA] ¢þ
>WENV170565943 FKKE01002636 [FKKE] freshwater metagenome; freshwater 76832 76756 - Met CAT [ENA] ¢þ
>WENV170566310 FKKE01015217 [FKKE] freshwater metagenome; freshwater 468 544 + Met CAT [ENA] ¢þ
>WENV170576386 FRDC01000509 [FRDC] freshwater metagenome; water 173846 173922 + Met CAT [ENA] ¢þ
>WENV170576738 FRDC01001633 [FRDC] freshwater metagenome; water 55293 55217 - Met CAT [ENA] ¢þ
>WENV170577144 FRDC01003564 [FRDC] freshwater metagenome; water 177 101 - Met CAT [ENA] ¢þ
>WENV170577347 FRDC01004689 [FRDC] freshwater metagenome; water 1121 1045 - Met CAT [ENA] ¢þ
>WENV170577753 FSSH01000829 [FSSH] freshwater metagenome; drinking water 175 251 + Met CAT [ENA] ¢þ
>WENV170577966 FSSH01004008 [FSSH] freshwater metagenome; drinking water 26778 26854 + Met CAT [ENA] ¢þ
>WENV170709783 LNFM01000702 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 76438 76362 - Met CAT [ENA] ¢þ
>WENV170712243 LNFM01011232 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1791 1867 + Met CAT [ENA] ¢þ
>WENV170713562 LNFM01034779 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 7615 7539 - Met CAT [ENA] ¢þ
>WENV170974900 MTKY01080565 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 908 832 - Met CAT [ENA] ¢þ
>W1910204685 FJVM01000010 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVM] 173846 173922 + Met CAT [ENA] ¡û
>W1910204721 FJVM02000016 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVM] 55293 55217 - Met CAT [ENA] ¡û
>W1910204779 FJVN01000310 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVN] 468 544 + Met CAT [ENA] ¡û
>W1910441985 FWEX01000006 Nitrospirota Nitrospira sp. ND1 [FWEX] 910088 910012 - Met CAT [ENA] ¡û
>W1910731423 MHEN01000064 Nitrospirota Nitrospirae bacterium RBG_19FT_COMBO_58_9 [MHEN] 338 262 - Met CAT [ENA] ¡û
>W1911545208 OUNR01000001 Nitrospirota Nitrospira lenta [OUNR] 470402 470326 - Met CAT [ENA] ¡û
>C151086588 CP011801 Nitrospirota Nitrospira moscoviensis NSP M-1 [CP011801] 795140 795216 + Met CAT - ¡û
>ENV09000934 ABSQ01000586 Freshwater sediment metagenome lwMethenol_C1 794 870 + Met CAT [ENA] ¡û
>C10109719 FP929003 Nitrospirota Nitrospira defluvii [FP929003] 968830 968906 + Met CAT [Ensembl] ¡û
>W1610121174 CZPZ01000032 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 106437 106513 + Met CAT [ENA] ¡û
>W1610121201 CZQA01000001 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 136411 136335 - Met CAT [ENA] ¡û
>W1610574659 JZQY01000033 Nitrospirota Nitrospira sp. OLB3 [JZQY] 21352 21428 + Met CAT [ENA] ¡û
>W1610752772 LNDU01000063 Nitrospirota Nitrospira sp. Ga0074138 [LNDU] 16109 16185 + Met CAT [ENA] ¡û
>W1710123878 CZPZ01000032 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 106437 106513 + Met CAT [ENA] ¡û
>W1710123905 CZQA01000001 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 136411 136335 - Met CAT [ENA] ¡û
>W1710691894 JZQY01000033 Nitrospirota Nitrospira sp. OLB3 [JZQY] 21352 21428 + Met CAT [ENA] ¡û
Identical group No.350230 (5 seq.)
>W1711399609 MFFQ01000066 Unclassified Candidatus Eisenbacteria bacterium RBG_16_71_46 [MFFQ] 34350 34274 - Met CAT [ENA] ¡û
>W131224430 AUCU01000010 Thermodesulfobacteriota Desulfatirhabdium butyrativorans DSM 18734 [AUCU] 155213 155289 + Met CAT [ENA] ¡û
>WENV183693170 ORMF012037269 [ORMF] groundwater metagenome; groundwater 3607 3683 + fMet CAT [ENA] ¢þ
>WENV170557614 CXWL01031736 [CXWL] groundwater metagenome; biofilm material 435 511 + Met CAT [ENA] ¢þ
>ENV09000968 ABSQ01004915 Freshwater sediment metagenome lwMethenol_C1 322 398 + Met CAT [ENA] ¡û
Identical group No.359395 (2 seq.)
>C191104250 CP033325 Actinomycetota Georgenia faecalis ZLJ0423 [CP033325] 2895716 2895641 - Met CAT - ¡û
>ENV09001031 ABSQ01018935 Freshwater sediment metagenome lwMethenol_C1 658 582 - Met CAT [ENA] ¡û
Identical group No.360352 (8 seq.)
>W1711583875 MNXU01000010 Betaproteobacteria Betaproteobacteria bacterium CG2_30_68_42 [MNXU] 6923 6999 + Met CAT [ENA] ¡û
>WENV180315354 OBKH01073642 [OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature 349 425 + fMet CAT [ENA] ¢þ
>WENV181169348 OEIV010001541 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 10248 10172 - fMet CAT [ENA] ¢þ
>WENV170639333 JFJP01001927 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 17319 17243 - Met CAT [ENA] ¢þ
>C191004312 AP018718 Betaproteobacteria Sulfuricystis multivorans J5B [AP018718] 969259 969183 - Met CAT - ¡û
>C191007541 AP019373 Betaproteobacteria Sulfuricystis thermophila M52 [AP019373] 991883 991807 - Met CAT - ¡û
>W1910128396 BHVV01000008 Betaproteobacteria Sulfurisoma sediminicola BSN1 [BHVV] 385545 385621 + Met CAT [ENA] ¡û
>ENV09001074 ABSQ01027858 Freshwater sediment metagenome lwMethenol_C1 359 283 - Met CAT [ENA] ¡û
Identical group No.373508 (7 seq.)
>WENV180304397 OBJI01023008 [OBJI] soil metagenome; soil 178 251 + Met CAT [ENA] ¢þ
>WENV180345176 OBLM01088922 [OBLM] soil metagenome; soil 83 156 + Met CAT [ENA] ¢þ
>WENV170552426 CXWJ01066060 [CXWJ] wastewater metagenome; activated sludge 119 45 - Met CAT [ENA] ¢þ
>WENV170573373 FLYK01014213 [FLYK] hot springs metagenome; Sediment 466 540 + Met CAT [ENA] ¢þ
>WENV170574906 FLYN01016213 [FLYN] hot springs metagenome; Sediment 665 739 + Met CAT [ENA] ¢þ
>WENV170956475 MJUP01018634 [MJUP] soil metagenome; viral particles from soil sample MGM 174 248 + Met CAT [ENA] ¢þ
>ENV09000971 ABSQ01005871 Freshwater sediment metagenome lwMethenol_C1 130 54 - Met CAT [ENA] ¡û
Identical group No.393128 (6 seq.)
>WENV180039728 LLBY010140161 [LLBY] soil metagenome; soil from tomato rhizosphere 2434 2361 - Ile2 CAT [ENA] ¢þ
>WENV180041124 LLBZ010048186 [LLBZ] soil metagenome; soil from tomato rhizosphere 374 447 + Ile2 CAT [ENA] ¢þ
>WENV180257870 OBEQ010949389 [OBEQ] groundwater metagenome; groundwater 176 103 - Ile2 CAT [ENA] ¢þ
>WENV180354820 OBNE01021787 [OBNE] groundwater metagenome; groundwater 100 173 + Ile2 CAT [ENA] ¢þ
>ENV09000565 ABSO01021582 Freshwater sediment metagenome lwFormate_C1 128 55 - Met CAT [ENA] ¡û
>ENV09001054 ABSQ01022306 Freshwater sediment metagenome lwMethenol_C1 581 655 + Met CAT [ENA] ¡û
Identical group No.408578 (1 seq.)
>ENV09000927 ABSQ01000423 Freshwater sediment metagenome lwMethenol_C1 798 874 + Met CAT [ENA] ¡û
Identical group No.408589 (2 seq.)
>ENV09000290 ABSN01045017 Freshwater sediment metagenome lwFormaldehyde_C1 229 153 - Met CAT [ENA] ¡û
>ENV09001004 ABSQ01014410 Freshwater sediment metagenome lwMethenol_C1 533 457 - Met CAT [ENA] ¡û
Identical group No.408599 (1 seq.)
>ENV09001085 ABSQ01030072 Freshwater sediment metagenome lwMethenol_C1 198 125 - Met CAT [ENA] ¡û
Identical group No.408608 (1 seq.)
>ENV09001164 ABSQ01042186 Freshwater sediment metagenome lwMethenol_C1 323 396 + Met CAT [ENA] ¡û
Identical group No.488072 (3 seq.)
>w013551 AANO01000001 Cyanobacteriota Synechococcus sp. WH 5701 [AANO] 147761 147838 + Met CAT [ENA] ¡û
>C171128307 LT578417 Cyanobacteriota Cyanobium sp. NIES-981 [LT578417] 1791867 1791795 - Met CAT - ¡û
>ENV09000974 ABSQ01006818 Freshwater sediment metagenome lwMethenol_C1 92 167 + Met CAT [ENA] ¡û
Identical group No.604456 (1 seq.)
>ENV09000980 ABSQ01007346 Freshwater sediment metagenome lwMethenol_C1 423 351 - Met CAT [ENA] ¡û
Identical group No.604486 (1 seq.)
>ENV09001149 ABSQ01039145 Freshwater sediment metagenome lwMethenol_C1 61 136 + Met CAT [ENA] ¡û
Identical group No.604492 (2 seq.)
>WENV170552811 CXWK01002325 [CXWK] wastewater metagenome; activated sludge 7323 7250 - Met CAT [ENA] ¢þ
>ENV09001220 ABSQ01052169 Freshwater sediment metagenome lwMethenol_C1 149 75 - Met CAT [ENA] ¡û
Identical group No.678367 (6 seq.)
>W1711409312 MGOC01000087 Chloroflexota Chloroflexi bacterium RBG_16_69_14 [MGOC] 56 130 + Met CAT [ENA] ¡û
>WENV180691966 OCZS010289738 [OCZS] soil metagenome; soil 422 496 + Met CAT [ENA] ¢þ
>WENV183662370 ORJL010185366 [ORJL] groundwater metagenome; groundwater 98483 98409 - Met CAT [ENA] ¢þ
>WENV183680116 ORMF010140418 [ORMF] groundwater metagenome; groundwater 978 1052 + Met CAT [ENA] ¢þ
>WENV183695559 ORMF012409156 [ORMF] groundwater metagenome; groundwater 804 730 - Met CAT [ENA] ¢þ
>ENV09000945 ABSQ01001688 Freshwater sediment metagenome lwMethenol_C1 690 616 - Met CAT [ENA] ¡û
Identical group No.722507 (3 seq.)
>WENV180284301 OBID01026894 [OBID] metagenome; sludge 297 223 - Met CAT [ENA] ¢þ
>WENV170554080 CXWK01045738 [CXWK] wastewater metagenome; activated sludge 1455 1381 - Met CAT [ENA] ¢þ
>ENV09001139 ABSQ01037261 Freshwater sediment metagenome lwMethenol_C1 633 707 + Met CAT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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