tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = CGT

HIT: 9 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.311868 (3 seq.)
>WENV181192194 OEPS010463924 [OEPS] soil metagenome; soil 56 132 + Thr CGT [ENA] ¢þ
>SRA1002849 SRR002326.57595 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 119 43 - Thr CGT [SRA]
>ENV09000973 ABSQ01006531 Freshwater sediment metagenome lwMethenol_C1 612 536 - Thr CGT [ENA] ¡û
Identical group No.408619 (1 seq.)
>ENV09001238 ABSQ01054888 Freshwater sediment metagenome lwMethenol_C1 593 519 - Thr CGT [ENA] ¡û
Identical group No.477591 (7 seq.)
>W1710925676 LODL01000013 Betaproteobacteria Dechloromonas denitrificans [LODL] 231084 231159 + Thr CGT [ENA] ¡û
>W131159959 AQWB01000017 Betaproteobacteria Rhodocyclus sp. UW 659-1-F08 [AQWB] 806 731 - Thr CGT [ENA] ¡û
>WENV170009793 APMI01003060 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 7924 7999 + Thr CGT [ENA] ¢þ
>WENV170961731 MLJW01000726 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 4858 4933 + Thr CGT [ENA] ¢þ
>W1910730015 MHBT01000091 Betaproteobacteria Methylophilales bacterium RIFCSPHIGHO2_02_FULL_57_10 [MHBT] 551 626 + Thr CGT [ENA] ¡û
>ENV09001234 ABSQ01054548 Freshwater sediment metagenome lwMethenol_C1 338 263 - Thr CGT [ENA] ¡û
>W1610783322 LODL01000013 Betaproteobacteria Dechloromonas denitrificans [LODL] 231084 231159 + Thr CGT [ENA] ¡û
Identical group No.486958 (26 seq.)
>W1711081748 LSSY01000020 Actinomycetota Actinobacteria bacterium SCGC AG-212-D09 [LSSY] 3843 3770 - Thr CGT [ENA] ¡û
>W131226478 AUEK01000006 Actinomycetota Candidatus Solirubrobacter pratensis URHD0082 [AUEK] 410609 410537 - Thr CGT [ENA] ¡û
>W1711391521 MELQ01000114 Actinomycetota Actinobacteria bacterium RBG_16_68_12 [MELQ] 494 422 - Thr CGT [ENA] ¡û
>W1711573384 MNDB01000062 Actinomycetota Actinobacteria bacterium 13_2_20CM_68_14 [MNDB] 6891 6819 - Thr CGT [ENA] ¡û
>WENV180022295 FTFY01000093 [FTFY] metagenome; soil 86 14 - Thr CGT [ENA] ¢þ
>WENV180029940 FTJL01027437 [FTJL] metagenome; soil 119 191 + Thr CGT [ENA] ¢þ
>WENV180030042 FTJL01084948 [FTJL] metagenome; soil 265 193 - Thr CGT [ENA] ¢þ
>WENV180038783 LLBY010005538 [LLBY] soil metagenome; soil from tomato rhizosphere 179 252 + Thr CGT [ENA] ¢þ
>WENV180040875 LLBZ010019820 [LLBZ] soil metagenome; soil from tomato rhizosphere 561 634 + Thr CGT [ENA] ¢þ
>WENV180345017 OBLL01483872 [OBLL] soil metagenome; soil 14 86 + Thr CGT [ENA] ¢þ
>WENV180354847 OBNE01024234 [OBNE] groundwater metagenome; groundwater 138 210 + Thr CGT [ENA] ¢þ
>WENV180356481 OBNK01036038 [OBNK] sediment metagenome; sediment 245 173 - Thr CGT [ENA] ¢þ
>WENV180691116 OCZS010063116 [OCZS] soil metagenome; soil 1170 1098 - Thr CGT [ENA] ¢þ
>WENV181123110 OEFO01103507 [OEFO] soil metagenome; soil 117 43 - Thr CGT [ENA] ¢þ
>WENV181155325 OEID01098891 [OEID] soil metagenome; soil 85 159 + Thr CGT [ENA] ¢þ
>WENV181163844 OEIQ01296523 [OEIQ] soil metagenome; soil 96 169 + Thr CGT [ENA] ¢þ
>WENV181165477 OEIS01003967 [OEIS] soil metagenome; soil 519 591 + Thr CGT [ENA] ¢þ
>WENV181294845 OFHH01053470 [OFHH] soil metagenome; Clay 240 167 - Thr CGT [ENA] ¢þ
>WENV181295562 OFHI01069029 [OFHI] soil metagenome; Clay 205 278 + Thr CGT [ENA] ¢þ
>WENV183724198 PJQE01001065 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 5211 5139 - Thr CGT [ENA] ¢þ
>WENV170566120 FKKE01007022 [FKKE] freshwater metagenome; freshwater 13283 13211 - Thr CGT [ENA] ¢þ
>WENV170566183 FKKE01008602 [FKKE] freshwater metagenome; freshwater 3558 3485 - Thr CGT [ENA] ¢þ
>WENV170573316 FLYK01006695 [FLYK] hot springs metagenome; Sediment 185 258 + Thr CGT [ENA] ¢þ
>ENV09000853 ABSP01051017 Freshwater sediment metagenome lwMethane_C1 248 176 - Thr CGT [ENA] ¡û
>ENV09001077 ABSQ01028815 Freshwater sediment metagenome lwMethenol_C1 716 644 - Thr CGT [ENA] ¡û
>W1610920583 LSSY01000020 Actinomycetota Actinobacteria bacterium SCGC AG-212-D09 [LSSY] 3843 3770 - Thr CGT [ENA] ¡û
Identical group No.487849 (5 seq.)
>WENV170715101 LNFM01133432 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 967 1042 + Thr CGT [ENA] ¢þ
>W1810476978 QAOL01000010 Betaproteobacteria Nitrosomonas ureae Nm4 [QAOL] 57396 57471 + Thr CGT [ENA] ¡û
>ENV09001235 ABSQ01054841 Freshwater sediment metagenome lwMethenol_C1 572 497 - Thr CGT [ENA] ¡û
>C161055561 CP013341 Betaproteobacteria Nitrosomonas ureae Nm10 [CP013341] 844704 844779 + Thr CGT [Ensembl] ¡û
>W1710527966 FNLN01000072 Betaproteobacteria Nitrosomonas ureae [FNLN] 191 266 + Thr CGT [ENA] ¡û
Identical group No.604488 (1 seq.)
>ENV09001192 ABSQ01045718 Freshwater sediment metagenome lwMethenol_C1 87 162 + Thr CGT [ENA] ¡û
Identical group No.677811 (14 seq.)
>W1711409346 MGOD01000080 Chloroflexota Chloroflexi bacterium RBG_16_70_13 [MGOD] 26132 26058 - Thr CGT [ENA] ¡û
>WENV180291869 OBIV01205658 [OBIV] soil metagenome; Clay 123 49 - Thr CGT [ENA] ¢þ
>WENV180308878 OBJR01284817 [OBJR] soil metagenome; soil 99 25 - Thr CGT [ENA] ¢þ
>WENV180327471 OBKT01158244 [OBKT] soil metagenome; soil 121 47 - Thr CGT [ENA] ¢þ
>WENV180352891 OBLQ010429429 [OBLQ] soil metagenome; soil 63 137 + Thr CGT [ENA] ¢þ
>WENV180355944 OBNJ01009519 [OBNJ] sediment metagenome; sediment 237 163 - Thr CGT [ENA] ¢þ
>WENV181292109 OFHD01037897 [OFHD] soil metagenome; Clay 389 315 - Thr CGT [ENA] ¢þ
>WENV181297221 OFHK01018146 [OFHK] soil metagenome; Clay 1168 1242 + Thr CGT [ENA] ¢þ
>WENV183660449 ORJL010025438 [ORJL] groundwater metagenome; groundwater 48513 48439 - Thr CGT [ENA] ¢þ
>WENV183689889 ORMF011508709 [ORMF] groundwater metagenome; groundwater 381 307 - Thr CGT [ENA] ¢þ
>WENV183749215 PPFU01135877 [PPFU] hypolithon metagenome; Antarctic Hypolithon 27 101 + Thr CGT [ENA] ¢þ
>ENV09000882 ABSP01055879 Freshwater sediment metagenome lwMethane_C1 162 88 - Thr CGT [ENA] ¡û
>ENV09001099 ABSQ01032359 Freshwater sediment metagenome lwMethenol_C1 433 359 - Thr CGT [ENA] ¡û
>ENV09001258 ABSQ01057383 Freshwater sediment metagenome lwMethenol_C1 379 453 + Thr CGT [ENA] ¡û
Identical group No.745840 (1 seq.)
>ENV09001104 ABSQ01032545 Freshwater sediment metagenome lwMethenol_C1 527 601 + Thr CGT [ENA] ¡û
Identical group No.745845 (1 seq.)
>ENV09001170 ABSQ01043069 Freshwater sediment metagenome lwMethenol_C1 762 688 - Thr CGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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