tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = GCA

HIT: 5 Group(s).
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.779480 (15 seq.)
>WENV180097525 MTBK01194003 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 460 387 - Cys GCA [ENA] ¢þ
>WENV181188063 OEOE01018604 [OEOE] activated sludge metagenome; Activated Sludge 596 669 + Cys GCA [ENA] ¢þ
>WENV181189294 OEOF01019788 [OEOF] activated sludge metagenome; Activated Sludge 568 641 + Cys GCA [ENA] ¢þ
>WENV181379508 OFRD01002393 [OFRD] wastewater metagenome; Exp Tend CN 100WW 3522 3595 + Cys GCA [ENA] ¢þ
>WENV181400686 OFSF01018302 [OFSF] wastewater metagenome; Exp Tend VB 100WW 928 1001 + Cys GCA [ENA] ¢þ
>WENV170558924 CXWL01100330 [CXWL] groundwater metagenome; biofilm material 7759 7832 + Cys GCA [ENA] ¢þ
>WENV170601278 FUWD010164998 [FUWD] metagenome; unknown 183 256 + Cys GCA [ENA] ¢þ
>WENV170706044 LNAP01000968 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 31423 31496 + Cys GCA [ENA] ¢þ
>WENV170961468 MLJW01000057 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 107714 107787 + Cys GCA [ENA] ¢þ
>C151104084 LN794158 Betaproteobacteria Candidatus Methylopumilus turicensis MMS-10A-171 [LN794158] 1026708 1026635 - Cys GCA [Ensembl] ¡û
>ENV09001222 ABSQ01052576 Freshwater sediment metagenome lwMethenol_C1 675 748 + Cys GCA [ENA] ¡û
>ENV09001520 ABSR01024042 Freshwater sediment metagenome lwMethylamine_C1 435 362 - Cys GCA [ENA] ¡û
>ENV09001595 ABSR01034670 Freshwater sediment metagenome lwMethylamine_C1 364 437 + Cys GCA [ENA] ¡û
>C10109347 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 794849 794922 + Cys GCA [Ensembl] ¡û
>W1511433556 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 973386 973313 - Cys GCA [ENA] ¡û
Identical group No.821269 (1 seq.)
>ENV09000939 ABSQ01001472 Freshwater sediment metagenome lwMethenol_C1 642 715 + Cys GCA [ENA] ¡û
Identical group No.821272 (1 seq.)
>ENV09001048 ABSQ01021960 Freshwater sediment metagenome lwMethenol_C1 555 482 - Cys GCA [ENA] ¡û
Identical group No.821274 (1 seq.)
>ENV09001159 ABSQ01040946 Freshwater sediment metagenome lwMethenol_C1 78 5 - Cys GCA [ENA] ¡û
Identical group No.821280 (1 seq.)
>ENV09001254 ABSQ01056976 Freshwater sediment metagenome lwMethenol_C1 407 480 + Pseudo GCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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