tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = GCT

HIT: 8 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.8226 (33 seq.)
>W1710893311	LNEP01000012	Betaproteobacteria	Betaproteobacteria bacterium Ga0077540 [LNEP]	96063	95970	-	Ser	GCT	[ENA]	○
>W131164744	ARBA01000002	Betaproteobacteria	Methylotenera mobilis 13 [ARBA]	232142	232049	-	Ser	GCT	[ENA]	○
>W131186182	ARVX01000001	Betaproteobacteria	Methylotenera versatilis 79 [ARVX]	299072	299165	+	Ser	GCT	[ENA]	○
>W131186409	ARWC01000001	Betaproteobacteria	Methylotenera sp. 1P/1 [ARWC]	1415242	1415149	-	Ser	GCT	[ENA]	○
>W131186557	ARWF01000001	Betaproteobacteria	Methylotenera sp. 73s [ARWF]	1178547	1178640	+	Ser	GCT	[ENA]	○
>WENV181187817	OEOE01000039	[OEOE] activated sludge metagenome; Activated Sludge		14518	14425	-	Ser	GCT	[ENA]	◯
>WENV181189047	OEOF01000034	[OEOF] activated sludge metagenome; Activated Sludge		22364	22271	-	Ser	GCT	[ENA]	◯
>WENV181222660	OFDC01000054	[OFDC] hot springs metagenome; Water		60144	60051	-	Ser	GCT	[ENA]	◯
>WENV181226718	OFDN01000020	[OFDN] hot springs metagenome; Water		153439	153532	+	Ser	GCT	[ENA]	◯
>WENV181384197	OFRH01035099	[OFRH] wastewater metagenome; Exp Tend NO 100WW		283	190	-	Ser	GCT	[ENA]	◯
>WENV181400533	OFSF01009622	[OFSF] wastewater metagenome; Exp Tend VB 100WW		746	653	-	Ser	GCT	[ENA]	◯
>W141350154	JCKJ01000001	Betaproteobacteria	Methylophilaceae bacterium 11 [JCKJ]	2293123	2293030	-	Ser	GCT	[ENA]	○
>WENV170559158	CXWL01112316	[CXWL] groundwater metagenome; biofilm material		1067	1160	+	Ser	GCT	[ENA]	◯
>WENV170577525	FSSH01000116	[FSSH] freshwater metagenome; drinking water		271863	271956	+	Ser	GCT	[ENA]	◯
>WENV170705482	LNAO01000930	[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		3299	3206	-	Ser	GCT	[ENA]	◯
>WENV170706208	LNAP01001687	[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		1050	957	-	Ser	GCT	[ENA]	◯
>WENV170706209	LNAP01001689	[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		227	134	-	Ser	GCT	[ENA]	◯
>WENV170961568	MLJW01000169	[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for		9164	9071	-	Ser	GCT	[ENA]	◯
>WENV170961680	MLJW01000485	[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for		1903	1996	+	Ser	GCT	[ENA]	◯
>W141819379	JQMG01000001	Betaproteobacteria	Methylotenera sp. L2L1 [JQMG]	1419258	1419165	-	Ser	GCT	[ENA]	○
>W1910730035	MHBU01000027	Betaproteobacteria	Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU]	82980	83073	+	Ser	GCT	[ENA]	○
>C09107801	CP001672	Betaproteobacteria	Methylotenera mobilis JLW8 [CP001672]	2074601	2074694	+	Ser	GCT	[Ensembl]	○
>W1911624008	PQVH01000013	Betaproteobacteria	Methylotenera oryzisoli La3113 [PQVH]	44796	44889	+	Ser	GCT	[ENA]	○
>C151104076	LN794158	Betaproteobacteria	Candidatus Methylopumilus turicensis MMS-10A-171 [LN794158]	1384997	1385090	+	Ser	GCT	[Ensembl]	○
>ENV09000674	ABSP01013679	Freshwater sediment metagenome lwMethane_C1		587	680	+	Ser	GCT	[ENA]	○
>ENV09000929	ABSQ01000490	Freshwater sediment metagenome lwMethenol_C1		605	512	-	Ser	GCT	[ENA]	○
>ENV09001293	ABSR01000664	Freshwater sediment metagenome lwMethylamine_C1		870	777	-	Ser	GCT	[ENA]	○
>ENV09001331	ABSR01001872	Freshwater sediment metagenome lwMethylamine_C1		970	877	-	Ser	GCT	[ENA]	○
>ENV09001345	ABSR01002384	Freshwater sediment metagenome lwMethylamine_C1		2465	2558	+	Ser	GCT	[ENA]	○
>W1511431985	JUGE01000001	Betaproteobacteria	Methylotenera sp. N17 [JUGE]	1960937	1960844	-	Ser	GCT	[ENA]	○
>W1511432031	JUGF01000002	Betaproteobacteria	Methylotenera versatilis 7 [JUGF]	1252291	1252198	-	Ser	GCT	[ENA]	○
>W1511433545	JUHH01000001	Betaproteobacteria	Methylotenera sp. G11 [JUHH]	2292730	2292637	-	Ser	GCT	[ENA]	○
>W1610753577	LNEP01000012	Betaproteobacteria	Betaproteobacteria bacterium Ga0077540 [LNEP]	96063	95970	-	Ser	GCT	[ENA]	○
Identical group No.11227 (1 seq.)
>ENV09001091	ABSQ01031302	Freshwater sediment metagenome lwMethenol_C1		297	390	+	Ser	GCT	[ENA]	○
Identical group No.11228 (1 seq.)
>ENV09001150	ABSQ01039189	Freshwater sediment metagenome lwMethenol_C1		346	253	-	Ser	GCT	[ENA]	○
Identical group No.11229 (1 seq.)
>ENV09001240	ABSQ01055151	Freshwater sediment metagenome lwMethenol_C1		728	635	-	Ser	GCT	[ENA]	○
Identical group No.13585 (13 seq.)
>W1710892494	LNDU01000051	Nitrospirota	Nitrospira sp. Ga0074138 [LNDU]	83424	83332	-	Ser	GCT	[ENA]	○
>WENV180284476	OBID01046862	[OBID] metagenome; sludge		373	465	+	Ser	GCT	[ENA]	◯
>WENV170556794	CXWL01013999	[CXWL] groundwater metagenome; biofilm material		1190	1098	-	Ser	GCT	[ENA]	◯
>WENV170556811	CXWL01014365	[CXWL] groundwater metagenome; biofilm material		6119	6027	-	Ser	GCT	[ENA]	◯
>WENV170576351	FRDC01000435	[FRDC] freshwater metagenome; water		62063	62155	+	Ser	GCT	[ENA]	◯
>WENV170709407	LNFM01000317	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		83420	83328	-	Ser	GCT	[ENA]	◯
>W1910204672	FJVM01000007	Nitrospirota	Nitrospira cf. moscoviensis SBR1015 [FJVM]	62063	62155	+	Ser	GCT	[ENA]	○
>ENV09001233	ABSQ01054422	Freshwater sediment metagenome lwMethenol_C1		132	40	-	Ser	GCT	[ENA]	○
>W1610121177	CZPZ01000033	Nitrospirota	Candidatus Nitrospira nitrificans [CZPZ]	168736	168828	+	Ser	GCT	[ENA]	○
>W1610121219	CZQA01000012	Nitrospirota	Candidatus Nitrospira nitrosa [CZQA]	6890	6982	+	Ser	GCT	[ENA]	○
>W1610752760	LNDU01000051	Nitrospirota	Nitrospira sp. Ga0074138 [LNDU]	83424	83332	-	Ser	GCT	[ENA]	○
>W1710123881	CZPZ01000033	Nitrospirota	Candidatus Nitrospira nitrificans [CZPZ]	168736	168828	+	Ser	GCT	[ENA]	○
>W1710123923	CZQA01000012	Nitrospirota	Candidatus Nitrospira nitrosa [CZQA]	6890	6982	+	Ser	GCT	[ENA]	○
Identical group No.20306 (11 seq.)
>W1711385740	MEEN01000031	Bacteroidota	Niastella sp. SCN 39-18 [MEEN]	42738	42829	+	Ser	GCT	[ENA]	○
>W1711503762	MKTX01000007	Bacteroidota	Sphingobacteriales bacterium 39-19 [MKTX]	249407	249498	+	Ser	GCT	[ENA]	○
>WENV183092314	OLKZ01000020	[OLKZ] soil metagenome; soil		285817	285906	+	Ser	GCT	[ENA]	◯
>WENV170986009	MWVX01011119	[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil		411	322	-	Ser	GCT	[ENA]	◯
>WENV170986091	MWVX01015417	[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil		1068	1157	+	Ser	GCT	[ENA]	◯
>WENV170989829	MWVZ01115205	[MWVZ] soil metagenome; MS6-5 sample; Antarctic (ecotone) soil		198	109	-	Ser	GCT	[ENA]	◯
>WENV170990891	MWWA01066079	[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil		427	518	+	Ser	GCT	[ENA]	◯
>WENV170992965	MWWB01142677	[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil		382	293	-	Ser	GCT	[ENA]	◯
>WENV170995930	MWWF01095095	[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil		24	115	+	Ser	GCT	[ENA]	◯
>WENV170997160	MWWG01040964	[MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil		427	516	+	Ser	GCT	[ENA]	◯
>ENV09001081	ABSQ01029707	Freshwater sediment metagenome lwMethenol_C1		391	300	-	Ser	GCT	[ENA]	○
Identical group No.21880 (5 seq.)
>WENV180292612	OBIV01536653	[OBIV] soil metagenome; Clay		306	215	-	Ser	GCT	[ENA]	◯
>WENV180320396	OBKO01002331	[OBKO] soil metagenome; Alaskan Permafrost		329	238	-	Ser	GCT	[ENA]	◯
>WENV180691086	OCZS010058176	[OCZS] soil metagenome; soil		917	826	-	Ser	GCT	[ENA]	◯
>WENV183725356	PJQE01256392	[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane		212	303	+	Ser	GCT	[ENA]	◯
>ENV09001167	ABSQ01042692	Freshwater sediment metagenome lwMethenol_C1		51	142	+	Ser	GCT	[ENA]	○
Identical group No.87401 (54 seq.)
>A171000401	CP001338	Euryarchaeota	Methanosphaerula palustris E1-9c [CP001338]	2530742	2530657	-	Ser	GCT	-	○
>A171007211	HE964772	Euryarchaeota	Methanoculleus bourgensis MS2 MS2T [HE964772]	596733	596648	-	Ser	GCT	-	○
>A171007567	LT158599	Euryarchaeota	Methanoculleus bourgensis [LT158599]	611540	611455	-	Ser	GCT	-	○
>A171007636	LT549891	Euryarchaeota	Methanoculleus bourgensis [LT549891]	838745	838660	-	Ser	GCT	-	○
>WENV180353993	OBLQ011266886	[OBLQ] soil metagenome; soil		99	184	+	Ser	GCT	[ENA]	◯
>WENV181230048	OFEK01000225	[OFEK] activated sludge metagenome; Anaerobic digester		7608	7693	+	Ser	GCT	[ENA]	◯
>WENV181230373	OFEK01000744	[OFEK] activated sludge metagenome; Anaerobic digester		25133	25218	+	Ser	GCT	[ENA]	◯
>WENV181359221	OFMW01000412	[OFMW] sediment metagenome; Lake sediment		48	133	+	Ser	GCT	[ENA]	◯
>WENV181360962	OFNE01000833	[OFNE] sediment metagenome; Lake sediment		206	291	+	Ser	GCT	[ENA]	◯
>WENV181361273	OFNM01001821	[OFNM] sediment metagenome; Lake sediment		575	490	-	Ser	GCT	[ENA]	◯
>WENV181361476	OFNY01001869	[OFNY] sediment metagenome; Lake sediment		131	216	+	Ser	GCT	[ENA]	◯
>WENV181361491	OFNZ01000109	[OFNZ] sediment metagenome; Lake sediment		779	694	-	Ser	GCT	[ENA]	◯
>WENV181361749	OFOH01000657	[OFOH] sediment metagenome; Lake sediment		423	338	-	Ser	GCT	[ENA]	◯
>WENV181361777	OFOI01000417	[OFOI] sediment metagenome; Lake sediment		757	672	-	Ser	GCT	[ENA]	◯
>WENV181363166	OFOT01000597	[OFOT] sediment metagenome; Lake sediment		390	475	+	Ser	GCT	[ENA]	◯
>WENV183512900	OMKS01001744	[OMKS] sediment metagenome; hot spring sediment		13817	13732	-	Ser	GCT	[ENA]	◯
>WENV183701667	PDVH01000144	[PDVH] alkali sediment metagenome; glacial lake sediment		3225	3140	-	Ser	GCT	[ENA]	◯
>WENV183702075	PDVH01011619	[PDVH] alkali sediment metagenome; glacial lake sediment		229	314	+	Ser	GCT	[ENA]	◯
>WENV183702904	PDVJ01000675	[PDVJ] alkali sediment metagenome; glacial lake sediment		6297	6382	+	Ser	GCT	[ENA]	◯
>WENV183703314	PDVJ01009041	[PDVJ] alkali sediment metagenome; glacial lake sediment		65	150	+	Ser	GCT	[ENA]	◯
>At1261	CP000562	Euryarchaeota	Methanoculleus marisnigri JR1 [CP000562]	1792799	1792883	+	Ser	GCT	[Ensembl]	○
>WENV170562179	CZCB01001303	[CZCB] anaerobic digester metagenome; anaerobic digester		13070	13155	+	Ser	GCT	[ENA]	◯
>WENV170668588	LAHQ01002477	[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over		1820	1735	-	Ser	GCT	[ENA]	◯
>WENV170668820	LAHQ01057109	[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over		408	323	-	Ser	GCT	[ENA]	◯
>WENV170669068	LAHR01005769	[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over		71	156	+	Ser	GCT	[ENA]	◯
>WENV170670343	LAHT01002836	[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over		1156	1071	-	Ser	GCT	[ENA]	◯
>WENV170671131	LAHU01017321	[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from		1788	1703	-	Ser	GCT	[ENA]	◯
>WENV170671519	LAHU01071802	[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from		814	729	-	Ser	GCT	[ENA]	◯
>WENV170678109	LDZT01011153	[LDZT] terrestrial metagenome; oil reservoir sample SB1		1120	1205	+	Ser	GCT	[ENA]	◯
>WENV170678670	LDZU01003608	[LDZU] terrestrial metagenome; oil reservoir sample SB2		8433	8348	-	Ser	GCT	[ENA]	◯
>WENV170689519	LFRM01298634	[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle		28488	28573	+	Ser	GCT	[ENA]	◯
>WENV170715339	LNQE01001586	[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch		1707	1622	-	Ser	GCT	[ENA]	◯
>WENV170715953	LQYC01000011	[LQYC] bioreactor metagenome; benzene-degrading methanogenic enrichment culture from a contaminated aquifer at an oil		7163	7078	-	Ser	GCT	[ENA]	◯
>WENV170717948	LSQX01055462	[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition		5236	5321	+	Ser	GCT	[ENA]	◯
>WENV170971248	MTKX01002922	[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant		311	396	+	Ser	GCT	[ENA]	◯
>WENV170978871	MTKZ01064984	[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant		207	122	-	Ser	GCT	[ENA]	◯
>W1910211660	FMID01000003	Euryarchaeota	Methanoculleus chikugoensis [FMID]	24833	24918	+	Ser	GCT	[ENA]	○
>W1910226983	FNFT01000012	Euryarchaeota	Methanoculleus thermophilus DSM 2373 [FNFT]	26063	25978	-	Ser	GCT	[ENA]	○
>W1910572520	JMIO01000037	Euryarchaeota	Methanoculleus sp. MH98A [JMIO]	48227	48312	+	Ser	GCT	[ENA]	○
>W1910583808	JXOJ01000002	Euryarchaeota	Methanoculleus sediminis S3Fa [JXOJ]	118826	118911	+	Ser	GCT	[ENA]	○
>W1910617185	LHQS01000004	Euryarchaeota	Methanoculleus taiwanensis CYW4 [LHQS]	142264	142349	+	Ser	GCT	[ENA]	○
>W1910783530	MPOY01000258	Euryarchaeota	Methanoculleus sp. EBM-46 [MPOY]	12385	12470	+	Ser	GCT	[ENA]	○
>W1911581341	PGCL01000007	Euryarchaeota	Methanofollis fontis FWC-SCC2 [PGCL]	21451	21366	-	Ser	GCT	[ENA]	○
>ENV09001119	ABSQ01034865	Freshwater sediment metagenome lwMethenol_C1		273	360	+	Ser	GCT	[ENA]	○
>W1610000237	AASI01000001	Euryarchaeota	Methanoculleus marisnigri JR1 [AASI]	173225	173310	+	Ser	GCT	[ENA]	○
>W1610000999	ABZB01000002	Euryarchaeota	Methanosphaerula palustris palustris E1-9c [ABZB]	447434	447347	-	Ser	GCT	[ENA]	○
>W1610003478	AGCO01000002	Euryarchaeota	Methanofollis liminatans DSM 4140 [AGCO]	16048	15963	-	Ser	GCT	[ENA]	○
>W1610062975	BCNW01000001	Euryarchaeota	Methanofollis ethanolicus HASU [BCNW]	2594158	2594243	+	Ser	GCT	[ENA]	○
>W1610063037	BCNX01000009	Euryarchaeota	Methanoculleus thermophilus CR-1 [BCNX]	103492	103577	+	Ser	GCT	[ENA]	○
>W1610063051	BCNY01000004	Euryarchaeota	Methanoculleus horonobensis T10 [BCNY]	21623	21538	-	Ser	GCT	[ENA]	○
>W1610605069	LFRO01000077	Euryarchaeota	Methanoculleus sp. DTU007 [LFRO]	28488	28573	+	Ser	GCT	[ENA]	○
>W1610613674	LGGD01000047	Euryarchaeota	Methanoculleus marisnigri [LGGD]	1120	1205	+	Ser	GCT	[ENA]	○
>W1610614407	LGHE01000016	Euryarchaeota	Methanoculleus marisnigri [LGHE]	8433	8348	-	Ser	GCT	[ENA]	○
>W1610946083	LUYK01000224	Euryarchaeota	Methanomicrobiales archaeon Methan_07 [LUYK]	359	444	+	Ser	GCT	[ENA]	○