tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = GGT

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.408591 (1 seq.)
>ENV09001016 ABSQ01016216 Freshwater sediment metagenome lwMethenol_C1 288 362 + Thr GGT [ENA] ¡û
Identical group No.530090 (4 seq.)
>WENV180304189 OBJH01101935 [OBJH] soil metagenome; soil 106 179 + Thr GGT [ENA] ¢þ
>WENV181385926 OFRL01000125 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 377 304 - Thr GGT [ENA] ¢þ
>WENV181400833 OFSF01027883 [OFSF] wastewater metagenome; Exp Tend VB 100WW 931 858 - Thr GGT [ENA] ¢þ
>ENV09001030 ABSQ01018935 Freshwater sediment metagenome lwMethenol_C1 763 690 - Thr GGT [ENA] ¡û
Identical group No.604464 (1 seq.)
>ENV09001007 ABSQ01014604 Freshwater sediment metagenome lwMethenol_C1 784 712 - Thr GGT [ENA] ¡û
Identical group No.604483 (2 seq.)
>WENV181123135 OEFO01119783 [OEFO] soil metagenome; soil 130 205 + Thr GGT [ENA] ¢þ
>ENV09001131 ABSQ01036855 Freshwater sediment metagenome lwMethenol_C1 784 859 + Thr GGT [ENA] ¡û
Identical group No.663667 (22 seq.)
>W1710893721 LNFA01000260 Alphaproteobacteria Rhizobiales bacterium Ga0077549 [LNFA] 27382 27308 - Thr GGT [ENA] ¡û
>WENV181167175 OEIU01012386 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 3184 3110 - Thr GGT [ENA] ¢þ
>WENV181167207 OEIU01013959 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 799 725 - Thr GGT [ENA] ¢þ
>WENV181167309 OEIU01019422 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 2351 2277 - Thr GGT [ENA] ¢þ
>W141278413 JAFM01000001 Alphaproteobacteria Hyphomicrobium sp. 802 [JAFM] 1276164 1276090 - Thr GGT [ENA] ¡û
>WENV170002346 AGTN01000706 [AGTN] bioreactor metagenome; poplar biomass 25 99 + Thr GGT [ENA] ¢þ
>WENV170552798 CXWK01002097 [CXWK] wastewater metagenome; activated sludge 214462 214388 - Thr GGT [ENA] ¢þ
>WENV170577875 FSSH01002270 [FSSH] freshwater metagenome; drinking water 48354 48280 - Thr GGT [ENA] ¢þ
>WENV170709161 LNFM01000141 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 125599 125525 - Thr GGT [ENA] ¢þ
>WENV170710000 LNFM01001035 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 40761 40835 + Thr GGT [ENA] ¢þ
>WENV170711265 LNFM01004272 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 2183 2257 + Thr GGT [ENA] ¢þ
>W09135195 ACVL01000002 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 [ACVL] 121031 120957 - Thr GGT [ENA] ¡û
>SRA1001849 SRR001308.89703 Metagenomic characterization of a wastewater treatment plant (SRP000180) 224 150 - Thr GGT [SRA]
>W1810684773 QKYU01000016 Alphaproteobacteria Humitalea rosea DSM 24525 [QKYU] 16463 16389 - Thr GGT [ENA] ¡û
>ENV09000997 ABSQ01012726 Freshwater sediment metagenome lwMethenol_C1 432 358 - Thr GGT [ENA] ¡û
>W1510072659 CDHO01000003 Alphaproteobacteria Hyphomicrobium sp. GJ21 [CDHO] 1508789 1508715 - Thr GGT [ENA] ¡û
>C10107538 CP002083 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 [CP002083] 2789775 2789849 + Thr GGT [Ensembl] ¡û
>C11111406 FQ859181 Alphaproteobacteria Hyphomicrobium sp. MC1 [FQ859181] 648956 648882 - Thr GGT [Ensembl] ¡û
>W11181090 AGIS01000001 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [AGIS] 685016 684942 - Thr GGT [ENA] ¡û
>C131015811 CP005587 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [CP005587] 2912806 2912880 + Thr GGT [Ensembl] ¡û
>W1610753987 LNFA01000260 Alphaproteobacteria Rhizobiales bacterium Ga0077549 [LNFA] 27382 27308 - Thr GGT [ENA] ¡û
>W1710579340 FPCH01000001 Alphaproteobacteria Hyphomicrobium facile [FPCH] 497995 497921 - Thr GGT [ENA] ¡û
Identical group No.745846 (2 seq.)
>W1911385597 NVQB01000001 Bacteroidota Sphingobacteriaceae bacterium SH-48 [NVQB] 4809681 4809609 - Thr GGT [ENA] ¡û
>ENV09001182 ABSQ01044388 Freshwater sediment metagenome lwMethenol_C1 777 851 + Thr GGT [ENA] ¡û
Identical group No.745853 (1 seq.)
>ENV09001266 ABSQ01058066 Freshwater sediment metagenome lwMethenol_C1 672 746 + Thr GGT [ENA] ¡û
Identical group No.821279 (1 seq.)
>ENV09001244 ABSQ01055500 Freshwater sediment metagenome lwMethenol_C1 306 377 + Pseudo GGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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