tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = TCT

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.303519 (26 seq.)
>WENV180268199 OBEQ011939355 [OBEQ] groundwater metagenome; groundwater 8751 8675 - Arg TCT [ENA] ¢þ
>WENV180283688 OBID01001649 [OBID] metagenome; sludge 3624 3548 - Arg TCT [ENA] ¢þ
>WENV180693467 OCZS011263039 [OCZS] soil metagenome; soil 92 168 + Arg TCT [ENA] ¢þ
>WENV181188663 OEOE01258950 [OEOE] activated sludge metagenome; Activated Sludge 44 120 + Arg TCT [ENA] ¢þ
>WENV170551396 CXWJ01006596 [CXWJ] wastewater metagenome; activated sludge 7731 7807 + Arg TCT [ENA] ¢þ
>WENV170554092 CXWK01046002 [CXWK] wastewater metagenome; activated sludge 1233 1157 - Arg TCT [ENA] ¢þ
>WENV170555734 CXWL01001982 [CXWL] groundwater metagenome; biofilm material 7099 7023 - Arg TCT [ENA] ¢þ
>WENV170555917 CXWL01003143 [CXWL] groundwater metagenome; biofilm material 2434 2358 - Arg TCT [ENA] ¢þ
>WENV170556162 CXWL01005287 [CXWL] groundwater metagenome; biofilm material 150286 150210 - Arg TCT [ENA] ¢þ
>WENV170556407 CXWL01008196 [CXWL] groundwater metagenome; biofilm material 7322 7246 - Arg TCT [ENA] ¢þ
>WENV170556593 CXWL01010856 [CXWL] groundwater metagenome; biofilm material 9781 9857 + Arg TCT [ENA] ¢þ
>WENV170556691 CXWL01012217 [CXWL] groundwater metagenome; biofilm material 779 855 + Arg TCT [ENA] ¢þ
>WENV170556693 CXWL01012218 [CXWL] groundwater metagenome; biofilm material 233 309 + Arg TCT [ENA] ¢þ
>WENV170556897 CXWL01015780 [CXWL] groundwater metagenome; biofilm material 77 1 - Arg TCT [ENA] ¢þ
>WENV170576743 FRDC01001666 [FRDC] freshwater metagenome; water 79182 79258 + Arg TCT [ENA] ¢þ
>WENV170577795 FSSH01001258 [FSSH] freshwater metagenome; drinking water 10878 10802 - Arg TCT [ENA] ¢þ
>WENV170711022 LNFM01003295 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 7126 7050 - Arg TCT [ENA] ¢þ
>WENV170711397 LNFM01005069 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 18619 18695 + Arg TCT [ENA] ¢þ
>WENV170714587 LNFM01084054 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1540 1464 - Arg TCT [ENA] ¢þ
>W1910204724 FJVM02000018 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVM] 79182 79258 + Arg TCT [ENA] ¡û
>W1910441949 FWEX01000003 Nitrospirota Nitrospira sp. ND1 [FWEX] 44640 44716 + Arg TCT [ENA] ¡û
>ENV09001055 ABSQ01022605 Freshwater sediment metagenome lwMethenol_C1 833 757 - Arg TCT [ENA] ¡û
>W1610121145 CZPZ01000003 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 8233 8157 - Arg TCT [ENA] ¡û
>W1610121208 CZQA01000009 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 346401 346325 - Arg TCT [ENA] ¡û
>W1710123849 CZPZ01000003 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 8233 8157 - Arg TCT [ENA] ¡û
>W1710123912 CZQA01000009 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 346401 346325 - Arg TCT [ENA] ¡û
Identical group No.365134 (3 seq.)
>WENV180372872 OBOI01144148 [OBOI] sediment metagenome; sediment 330 254 - Arg TCT [ENA] ¢þ
>ENV09000842 ABSP01048108 Freshwater sediment metagenome lwMethane_C1 289 365 + Arg TCT [ENA] ¡û
>ENV09001040 ABSQ01021263 Freshwater sediment metagenome lwMethenol_C1 326 250 - Arg TCT [ENA] ¡û
Identical group No.408605 (1 seq.)
>ENV09001133 ABSQ01037261 Freshwater sediment metagenome lwMethenol_C1 17 93 + Arg TCT [ENA] ¡û
Identical group No.408617 (2 seq.)
>ENV09001216 ABSQ01051039 Freshwater sediment metagenome lwMethenol_C1 333 409 + Arg TCT [ENA] ¡û
>ENV09001504 ABSR01019714 Freshwater sediment metagenome lwMethylamine_C1 440 516 + Arg TCT [ENA] ¡û
Identical group No.580934 (2 seq.)
>WENV170574677 FLYN01003456 [FLYN] hot springs metagenome; Sediment 247 322 + Arg TCT [ENA] ¢þ
>ENV09001251 ABSQ01056555 Freshwater sediment metagenome lwMethenol_C1 685 610 - Arg TCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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