tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = CAA

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.71227 (1 seq.)
>ENV09001582 ABSR01033311 Freshwater sediment metagenome lwMethylamine_C1 381 292 - Leu CAA [ENA] ¡û
Identical group No.151363 (2 seq.)
>ENV09001514 ABSR01022651 Freshwater sediment metagenome lwMethylamine_C1 642 728 + Leu CAA [ENA] ¡û
>W1511433540 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 2268315 2268401 + Leu CAA [ENA] ¡û
Identical group No.185669 (14 seq.)
>WENV180391239 OBPM01051198 [OBPM] marine metagenome; ENVO:00002010 134 218 + Leu CAA [ENA] ¢þ
>WENV181835567 OGVI01003593 [OGVI] freshwater metagenome; freshwater 306 390 + Leu CAA [ENA] ¢þ
>WENV170621592 FUWD013064552 [FUWD] metagenome; unknown 1040 956 - Leu CAA [ENA] ¢þ
>WENV170629774 FUWD013280555 [FUWD] metagenome; unknown 1040 956 - Leu CAA [ENA] ¢þ
>WENV170689322 LFRM01288780 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 87 3 - Leu CAA [ENA] ¢þ
>WENV170706837 LNAP01007461 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 131 47 - Leu CAA [ENA] ¢þ
>W1910888823 NESD01000001 Betaproteobacteria Limnohabitans sp. Jir61 [NESD] 325127 325043 - Leu CAA [ENA] ¡û
>W1910889254 NESO01000001 Betaproteobacteria Limnohabitans sp. Rim8 [NESO] 293561 293645 + Leu CAA [ENA] ¡û
>W1910889297 NESP01000001 Betaproteobacteria Limnohabitans curvus MWH-C5 [NESP] 831449 831533 + Leu CAA [ENA] ¡û
>W1810305881 PTQX01000018 Betaproteobacteria Limnohabitans sp. TS-CS-82 [PTQX] 3014 3098 + Leu CAA [ENA] ¡û
>ENV09001469 ABSR01013337 Freshwater sediment metagenome lwMethylamine_C1 502 418 - Leu CAA [ENA] ¡û
>C11118200 CP002663 Betaproteobacteria Pusillimonas sp. T7-7 [CP002663] 2340762 2340846 + Leu CAA [Ensembl] ¡û
>WENV057258 AACY023289555 Marine microbial communities from Global Ocean Sampling (GOS) 916 830 - Leu CAA [ENA]
>W1710557390 FOKZ01000003 Betaproteobacteria Polaromonas sp. OV174 [FOKZ] 193948 194032 + Leu CAA [ENA] ¡û
Identical group No.190898 (11 seq.)
>W131164755 ARBA01000003 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 412213 412129 - Leu CAA [ENA] ¡û
>WENV170706427 LNAP01003094 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 36358 36442 + Leu CAA [ENA] ¢þ
>WENV170706926 LNAP01009090 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 16400 16316 - Leu CAA [ENA] ¢þ
>W141819358 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1359131 1359215 + Leu CAA [ENA] ¡û
>C09107786 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 480062 480146 + Leu CAA [Ensembl] ¡û
>W1911623994 PQVH01000009 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 22144 22060 - Leu CAA [ENA] ¡û
>ENV09001275 ABSR01000090 Freshwater sediment metagenome lwMethylamine_C1 2173 2257 + Leu CAA [ENA] ¡û
>ENV09001355 ABSR01002838 Freshwater sediment metagenome lwMethylamine_C1 787 871 + Leu CAA [ENA] ¡û
>ENV09001420 ABSR01006307 Freshwater sediment metagenome lwMethylamine_C1 2121 2205 + Leu CAA [ENA] ¡û
>ENV09001423 ABSR01006501 Freshwater sediment metagenome lwMethylamine_C1 3313 3229 - Leu CAA [ENA] ¡û
>ENV09001434 ABSR01007178 Freshwater sediment metagenome lwMethylamine_C1 659 743 + Leu CAA [ENA] ¡û
Identical group No.215872 (1 seq.)
>ENV09001360 ABSR01002955 Freshwater sediment metagenome lwMethylamine_C1 1284 1200 - Leu CAA [ENA] ¡û
Identical group No.215875 (1 seq.)
>ENV09001583 ABSR01033347 Freshwater sediment metagenome lwMethylamine_C1 814 730 - Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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