tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = CAG

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.86009 (1 seq.)
>ENV09001551 ABSR01027608 Freshwater sediment metagenome lwMethylamine_C1 401 315 - Leu CAG [ENA] ¡û
Identical group No.132203 (2 seq.)
>ENV09001438 ABSR01008227 Freshwater sediment metagenome lwMethylamine_C1 514 600 + Leu CAG [ENA] ¡û
>WENV077888 AAFX01119029 Soil microbial communities from Minnesota Farm 597 509 - Leu CAG [ENA]
Identical group No.198283 (7 seq.)
>WENV181364871 OFPE01008620 [OFPE] sediment metagenome; Lake sediment 123 39 - Leu CAG [ENA] ¢þ
>WENV181364971 OFPG01002906 [OFPG] sediment metagenome; Lake sediment 213 129 - Leu CAG [ENA] ¢þ
>WENV170559583 CXWL01131203 [CXWL] groundwater metagenome; biofilm material 638 554 - Leu CAG [ENA] ¢þ
>WENV170622663 FUWD013115596 [FUWD] metagenome; unknown 532 616 + Leu CAG [ENA] ¢þ
>WENV170630877 FUWD013329399 [FUWD] metagenome; unknown 532 616 + Leu CAG [ENA] ¢þ
>ENV09001463 ABSR01012140 Freshwater sediment metagenome lwMethylamine_C1 590 674 + Leu CAG [ENA] ¡û
>C10109373 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 1407738 1407654 - Leu CAG [Ensembl] ¡û
Identical group No.198977 (4 seq.)
>WENV170705802 LNAP01000352 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 88742 88826 + Leu CAG [ENA] ¢þ
>WENV170706082 LNAP01001056 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 29818 29902 + Leu CAG [ENA] ¢þ
>ENV09001572 ABSR01032301 Freshwater sediment metagenome lwMethylamine_C1 578 662 + Leu CAG [ENA] ¡û
>W1511433567 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 428229 428145 - Leu CAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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