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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Freshwater sediment metagenome lwMethylamine_C1
Anticodon = CAT
HIT:
7 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275143 (17 seq.)
>C171091676
CP019239
Betaproteobacteria
Rhodoferax saidenbachensis DSM 22694 [CP019239]
908047
908123
+
Met
CAT
-
¡û
>WENV180022080
FTFO01000146
[FTFO] metagenome; soil
1630
1554
-
Ile2
CAT
[ENA]
¢þ
>WENV180033778
FTKL01166217
[FTKL] metagenome; soil
107
31
-
Ile2
CAT
[ENA]
¢þ
>WENV180268294
OBEQ011951611
[OBEQ] groundwater metagenome; groundwater
195
119
-
Ile2
CAT
[ENA]
¢þ
>W141142464
AWQR01000052
Betaproteobacteria
Rhodoferax saidenbachensis ED16 [AWQR]
19168
19244
+
Met
CAT
[ENA]
¡û
>WENV170639603
JFJP01005308
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
18111
18187
+
Met
CAT
[ENA]
¢þ
>C191073192
CP031013
Betaproteobacteria
Polaromonas sp. SP1 [CP031013]
434132
434056
-
Met
CAT
-
¡û
>W141561783
JHYS01000019
Betaproteobacteria
Simplicispira psychrophila DSM 11588 [JHYS]
2582
2506
-
Met
CAT
[ENA]
¡û
>SRA1002943
SRR002326.114261
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
77
1
-
Met
CAT
[SRA]
>W1810577635
QEOJ01000016
Betaproteobacteria
Rhodoferax sp. YR267 [QEOJ]
64739
64815
+
Met
CAT
[ENA]
¡û
>W1810594323
QFZK01000003
Betaproteobacteria
Rhodoferax lacus IMCC26218 [QFZK]
129192
129268
+
Met
CAT
[ENA]
¡û
>ENV09001518
ABSR01024035
Freshwater sediment metagenome lwMethylamine_C1
434
510
+
Met
CAT
[ENA]
¡û
>W121084900
AKIV01000010
Betaproteobacteria
Polaromonas sp. CF318 [AKIV]
11708
11632
-
Met
CAT
[ENA]
¡û
>W1710523398
FNHX01000003
Betaproteobacteria
Polaromonas sp. JS666 [FNHX]
515034
515110
+
Met
CAT
[ENA]
¡û
>W1710524807
FNJA01000002
Betaproteobacteria
Rhodoferax sp. OV413 OV413 [FNJA]
852227
852303
+
Met
CAT
[ENA]
¡û
>W1710557412
FOKZ01000020
Betaproteobacteria
Polaromonas sp. OV174 [FOKZ]
44800
44876
+
Met
CAT
[ENA]
¡û
>W1710578337
FPBM01000017
Betaproteobacteria
Polaromonas sp. YR568 [FPBM]
31465
31541
+
Met
CAT
[ENA]
¡û
Identical group No.275872 (70 seq.)
>W1710878066
LMQQ01000001
Betaproteobacteria
Methylophilus sp. Leaf414 [LMQQ]
743954
744030
+
Met
CAT
[ENA]
¡û
>W1710878148
LMQS01000001
Betaproteobacteria
Methylophilus sp. Leaf416 [LMQS]
687990
688066
+
Met
CAT
[ENA]
¡û
>W1710878375
LMQX01000001
Betaproteobacteria
Methylophilus sp. Leaf459 [LMQX]
687705
687781
+
Met
CAT
[ENA]
¡û
>W1710893302
LNEP01000006
Betaproteobacteria
Betaproteobacteria bacterium Ga0077540 [LNEP]
147355
147431
+
Met
CAT
[ENA]
¡û
>W131163893
ARAC01000001
Betaproteobacteria
Methylophilus sp. 42 [ARAC]
882522
882446
-
Met
CAT
[ENA]
¡û
>W131164743
ARBA01000002
Betaproteobacteria
Methylotenera mobilis 13 [ARBA]
319812
319736
-
Met
CAT
[ENA]
¡û
>W131170294
ARFK01000004
Betaproteobacteria
Methylophilus sp. 1 [ARFK]
303413
303337
-
Met
CAT
[ENA]
¡û
>W131176246
ARJW01000016
Betaproteobacteria
Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW]
579642
579718
+
Met
CAT
[ENA]
¡û
>W131186181
ARVX01000001
Betaproteobacteria
Methylotenera versatilis 79 [ARVX]
229949
230025
+
Met
CAT
[ENA]
¡û
>W131186391
ARWC01000001
Betaproteobacteria
Methylotenera sp. 1P/1 [ARWC]
1231922
1231998
+
Met
CAT
[ENA]
¡û
>W131186556
ARWF01000001
Betaproteobacteria
Methylotenera sp. 73s [ARWF]
1109424
1109500
+
Met
CAT
[ENA]
¡û
>WENV180094458
MTBK01008212
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
353
429
+
Met
CAT
[ENA]
¢þ
>WENV016795
AACY020470209
Marine microbial communities from Global Ocean Sampling (GOS)
2175
2253
+
Met
CAT
[ENA]
>WENV181187876
OEOE01000932
[OEOE] activated sludge metagenome; Activated Sludge
1836
1912
+
Met
CAT
[ENA]
¢þ
>WENV181187877
OEOE01001005
[OEOE] activated sludge metagenome; Activated Sludge
3193
3117
-
Met
CAT
[ENA]
¢þ
>WENV181187892
OEOE01001323
[OEOE] activated sludge metagenome; Activated Sludge
870
794
-
Met
CAT
[ENA]
¢þ
>WENV181188157
OEOE01035184
[OEOE] activated sludge metagenome; Activated Sludge
14
90
+
Met
CAT
[ENA]
¢þ
>WENV181189078
OEOF01000306
[OEOF] activated sludge metagenome; Activated Sludge
819
743
-
Met
CAT
[ENA]
¢þ
>WENV181189109
OEOF01000786
[OEOF] activated sludge metagenome; Activated Sludge
14
90
+
Met
CAT
[ENA]
¢þ
>WENV181189110
OEOF01000809
[OEOF] activated sludge metagenome; Activated Sludge
1492
1416
-
Met
CAT
[ENA]
¢þ
>WENV181222542
OFDC01000006
[OFDC] hot springs metagenome; Water
208835
208911
+
Met
CAT
[ENA]
¢þ
>WENV181222911
OFDC01000601
[OFDC] hot springs metagenome; Water
17600
17676
+
Met
CAT
[ENA]
¢þ
>WENV181226788
OFDN01000069
[OFDN] hot springs metagenome; Water
7232
7308
+
Met
CAT
[ENA]
¢þ
>WENV181226976
OFDN01000706
[OFDN] hot springs metagenome; Water
7742
7666
-
Met
CAT
[ENA]
¢þ
>WENV181364839
OFPE01001373
[OFPE] sediment metagenome; Lake sediment
964
1040
+
Met
CAT
[ENA]
¢þ
>WENV181380006
OFRD01020516
[OFRD] wastewater metagenome; Exp Tend CN 100WW
263
187
-
Met
CAT
[ENA]
¢þ
>W141220068
AZXN01000001
Betaproteobacteria
Methylophilus sp. 5 [AZXN]
1981348
1981272
-
Met
CAT
[ENA]
¡û
>W141231908
BAUS01000002
Betaproteobacteria
Methylophilus sp. OH31 [BAUS]
299364
299288
-
Met
CAT
[ENA]
¡û
>W141350152
JCKJ01000001
Betaproteobacteria
Methylophilaceae bacterium 11 [JCKJ]
2108370
2108446
+
Met
CAT
[ENA]
¡û
>WENV170558843
CXWL01094896
[CXWL] groundwater metagenome; biofilm material
29059
29135
+
Met
CAT
[ENA]
¢þ
>WENV170577544
FSSH01000144
[FSSH] freshwater metagenome; drinking water
168759
168835
+
Met
CAT
[ENA]
¢þ
>WENV170601279
FUWD010165004
[FUWD] metagenome; unknown
120
44
-
Met
CAT
[ENA]
¢þ
>WENV170705468
LNAO01000776
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
4835
4911
+
Met
CAT
[ENA]
¢þ
>WENV170706538
LNAP01004033
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
22
98
+
Met
CAT
[ENA]
¢þ
>WENV170707707
LNAP01030646
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
22
98
+
Met
CAT
[ENA]
¢þ
>WENV170709203
LNFM01000180
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
147306
147382
+
Met
CAT
[ENA]
¢þ
>WENV170710578
LNFM01002071
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
53156
53232
+
Met
CAT
[ENA]
¢þ
>WENV170712341
LNFM01012234
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
96
20
-
Met
CAT
[ENA]
¢þ
>WENV170961635
MLJW01000269
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
17411
17487
+
Met
CAT
[ENA]
¢þ
>W141819378
JQMG01000001
Betaproteobacteria
Methylotenera sp. L2L1 [JQMG]
1475583
1475507
-
Met
CAT
[ENA]
¡û
>W1910730025
MHBU01000015
Betaproteobacteria
Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU]
1055
979
-
Met
CAT
[ENA]
¡û
>C09107573
CP001674
Betaproteobacteria
Methylovorus glucosotrophus SIP3-4 [CP001674]
2144338
2144414
+
Met
CAT
[Ensembl]
¡û
>C09107800
CP001672
Betaproteobacteria
Methylotenera mobilis JLW8 [CP001672]
2008640
2008716
+
Met
CAT
[Ensembl]
¡û
>W1911624007
PQVH01000012
Betaproteobacteria
Methylotenera oryzisoli La3113 [PQVH]
216362
216438
+
Met
CAT
[ENA]
¡û
>SRA1003117
SRR002326.211703
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
86
162
+
Met
CAT
[SRA]
>C151089475
CP012020
Betaproteobacteria
Methylophilus sp. TWE2 [CP012020]
883794
883718
-
Met
CAT
[Ensembl]
¡û
>ENV09000277
ABSN01042775
Freshwater sediment metagenome lwFormaldehyde_C1
347
271
-
Met
CAT
[ENA]
¡û
>ENV09000418
ABSN01066352
Freshwater sediment metagenome lwFormaldehyde_C1
540
616
+
Met
CAT
[ENA]
¡û
>ENV09000772
ABSP01033361
Freshwater sediment metagenome lwMethane_C1
484
560
+
Met
CAT
[ENA]
¡û
>ENV09000828
ABSP01046369
Freshwater sediment metagenome lwMethane_C1
239
315
+
Met
CAT
[ENA]
¡û
>ENV09001278
ABSR01000108
Freshwater sediment metagenome lwMethylamine_C1
646
570
-
Met
CAT
[ENA]
¡û
>ENV09001328
ABSR01001590
Freshwater sediment metagenome lwMethylamine_C1
665
741
+
Met
CAT
[ENA]
¡û
>ENV09001339
ABSR01002162
Freshwater sediment metagenome lwMethylamine_C1
651
575
-
Met
CAT
[ENA]
¡û
>ENV09001352
ABSR01002458
Freshwater sediment metagenome lwMethylamine_C1
1778
1854
+
Met
CAT
[ENA]
¡û
>ENV09001416
ABSR01006001
Freshwater sediment metagenome lwMethylamine_C1
834
758
-
Met
CAT
[ENA]
¡û
>ENV09001488
ABSR01016852
Freshwater sediment metagenome lwMethylamine_C1
552
628
+
Met
CAT
[ENA]
¡û
>ENV09001555
ABSR01028671
Freshwater sediment metagenome lwMethylamine_C1
522
446
-
Met
CAT
[ENA]
¡û
>ENV09001564
ABSR01030211
Freshwater sediment metagenome lwMethylamine_C1
509
585
+
Met
CAT
[ENA]
¡û
>ENV09001573
ABSR01032591
Freshwater sediment metagenome lwMethylamine_C1
44
120
+
Met
CAT
[ENA]
¡û
>ENV09001584
ABSR01033361
Freshwater sediment metagenome lwMethylamine_C1
559
635
+
Met
CAT
[ENA]
¡û
>C10109356
CP002056
Betaproteobacteria
Methylotenera versatilis 301 [CP002056]
2350881
2350957
+
Met
CAT
[Ensembl]
¡û
>W1511431977
JUGE01000001
Betaproteobacteria
Methylotenera sp. N17 [JUGE]
1765420
1765496
+
Met
CAT
[ENA]
¡û
>W1511432030
JUGF01000002
Betaproteobacteria
Methylotenera versatilis 7 [JUGF]
1333388
1333312
-
Met
CAT
[ENA]
¡û
>W1511433384
JUHE01000001
Betaproteobacteria
Methylophilus sp. Q8 [JUHE]
324182
324258
+
Met
CAT
[ENA]
¡û
>W1511433544
JUHH01000001
Betaproteobacteria
Methylotenera sp. G11 [JUHH]
2351455
2351379
-
Met
CAT
[ENA]
¡û
>W1610740412
LMQQ01000001
Betaproteobacteria
Methylophilus sp. Leaf414 [LMQQ]
743954
744030
+
Met
CAT
[ENA]
¡û
>W1610740494
LMQS01000001
Betaproteobacteria
Methylophilus sp. Leaf416 [LMQS]
687990
688066
+
Met
CAT
[ENA]
¡û
>W1610740721
LMQX01000001
Betaproteobacteria
Methylophilus sp. Leaf459 [LMQX]
687705
687781
+
Met
CAT
[ENA]
¡û
>W1610753568
LNEP01000006
Betaproteobacteria
Betaproteobacteria bacterium Ga0077540 [LNEP]
147355
147431
+
Met
CAT
[ENA]
¡û
>W1710520768
FNFX01000001
Betaproteobacteria
Methylophilus rhizosphaerae [FNFX]
693867
693943
+
Met
CAT
[ENA]
¡û
Identical group No.275876 (49 seq.)
>W1710878087
LMQQ01000003
Betaproteobacteria
Methylophilus sp. Leaf414 [LMQQ]
459285
459361
+
Met
CAT
[ENA]
¡û
>W1710878164
LMQS01000002
Betaproteobacteria
Methylophilus sp. Leaf416 [LMQS]
6252
6176
-
Met
CAT
[ENA]
¡û
>W1710878399
LMQX01000009
Betaproteobacteria
Methylophilus sp. Leaf459 [LMQX]
327
251
-
Met
CAT
[ENA]
¡û
>W1710893297
LNEP01000004
Betaproteobacteria
Betaproteobacteria bacterium Ga0077540 [LNEP]
274
198
-
Met
CAT
[ENA]
¡û
>W131163899
ARAC01000002
Betaproteobacteria
Methylophilus sp. 42 [ARAC]
499287
499211
-
Met
CAT
[ENA]
¡û
>W131164756
ARBA01000003
Betaproteobacteria
Methylotenera mobilis 13 [ARBA]
226637
226561
-
Met
CAT
[ENA]
¡û
>W131170275
ARFK01000003
Betaproteobacteria
Methylophilus sp. 1 [ARFK]
368632
368556
-
Met
CAT
[ENA]
¡û
>W131176220
ARJW01000004
Betaproteobacteria
Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW]
8336
8412
+
Met
CAT
[ENA]
¡û
>W131186215
ARVX01000001
Betaproteobacteria
Methylotenera versatilis 79 [ARVX]
779
703
-
Met
CAT
[ENA]
¡û
>W131186403
ARWC01000001
Betaproteobacteria
Methylotenera sp. 1P/1 [ARWC]
2728906
2728982
+
Met
CAT
[ENA]
¡û
>W131186577
ARWF01000001
Betaproteobacteria
Methylotenera sp. 73s [ARWF]
880254
880178
-
Met
CAT
[ENA]
¡û
>WENV181187848
OEOE01000292
[OEOE] activated sludge metagenome; Activated Sludge
163
87
-
fMet
CAT
[ENA]
¢þ
>WENV181187887
OEOE01001216
[OEOE] activated sludge metagenome; Activated Sludge
193
117
-
fMet
CAT
[ENA]
¢þ
>WENV181189128
OEOF01001883
[OEOF] activated sludge metagenome; Activated Sludge
193
117
-
fMet
CAT
[ENA]
¢þ
>WENV181189180
OEOF01005839
[OEOF] activated sludge metagenome; Activated Sludge
1166
1242
+
fMet
CAT
[ENA]
¢þ
>WENV181222629
OFDC01000035
[OFDC] hot springs metagenome; Water
189642
189718
+
fMet
CAT
[ENA]
¢þ
>WENV181222936
OFDC01000733
[OFDC] hot springs metagenome; Water
371
295
-
fMet
CAT
[ENA]
¢þ
>WENV181227111
OFDN01001931
[OFDN] hot springs metagenome; Water
169
93
-
fMet
CAT
[ENA]
¢þ
>WENV181365419
OFPQ01001573
[OFPQ] sediment metagenome; Lake sediment
51
127
+
fMet
CAT
[ENA]
¢þ
>WENV181379517
OFRD01002544
[OFRD] wastewater metagenome; Exp Tend CN 100WW
4442
4518
+
fMet
CAT
[ENA]
¢þ
>WENV181400482
OFSF01007881
[OFSF] wastewater metagenome; Exp Tend VB 100WW
1369
1293
-
fMet
CAT
[ENA]
¢þ
>W141220076
AZXN01000001
Betaproteobacteria
Methylophilus sp. 5 [AZXN]
492935
492859
-
Met
CAT
[ENA]
¡û
>W141231921
BAUS01000007
Betaproteobacteria
Methylophilus sp. OH31 [BAUS]
436392
436468
+
Met
CAT
[ENA]
¡û
>W141350144
JCKJ01000001
Betaproteobacteria
Methylophilaceae bacterium 11 [JCKJ]
804929
805005
+
Met
CAT
[ENA]
¡û
>WENV170558454
CXWL01071487
[CXWL] groundwater metagenome; biofilm material
230
154
-
Met
CAT
[ENA]
¢þ
>WENV170577530
FSSH01000116
[FSSH] freshwater metagenome; drinking water
126
50
-
Met
CAT
[ENA]
¢þ
>WENV170606530
FUWD010680099
[FUWD] metagenome; unknown
351
427
+
Met
CAT
[ENA]
¢þ
>WENV170708611
LNAP01099531
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
347
271
-
Met
CAT
[ENA]
¢þ
>WENV170708977
LNFM01000055
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
245761
245837
+
Met
CAT
[ENA]
¢þ
>WENV170710304
LNFM01001502
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
194
118
-
Met
CAT
[ENA]
¢þ
>WENV170714367
LNFM01069866
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
483
407
-
Met
CAT
[ENA]
¢þ
>WENV170714545
LNFM01080362
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
214
138
-
Met
CAT
[ENA]
¢þ
>WENV170961461
MLJW01000056
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
146950
147026
+
Met
CAT
[ENA]
¢þ
>W141819384
JQMG01000001
Betaproteobacteria
Methylotenera sp. L2L1 [JQMG]
213823
213747
-
Met
CAT
[ENA]
¡û
>W1910730027
MHBU01000019
Betaproteobacteria
Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU]
212
136
-
Met
CAT
[ENA]
¡û
>C09107787
CP001672
Betaproteobacteria
Methylotenera mobilis JLW8 [CP001672]
690763
690839
+
Met
CAT
[Ensembl]
¡û
>W1911623977
PQVH01000001
Betaproteobacteria
Methylotenera oryzisoli La3113 [PQVH]
119
43
-
Met
CAT
[ENA]
¡û
>C151089463
CP012020
Betaproteobacteria
Methylophilus sp. TWE2 [CP012020]
2353162
2353086
-
Met
CAT
[Ensembl]
¡û
>ENV09001387
ABSR01004328
Freshwater sediment metagenome lwMethylamine_C1
1292
1368
+
Met
CAT
[ENA]
¡û
>C10109343
CP002056
Betaproteobacteria
Methylotenera versatilis 301 [CP002056]
725988
726064
+
Met
CAT
[Ensembl]
¡û
>W1511431969
JUGE01000001
Betaproteobacteria
Methylotenera sp. N17 [JUGE]
518482
518558
+
Met
CAT
[ENA]
¡û
>W1511432026
JUGF01000002
Betaproteobacteria
Methylotenera versatilis 7 [JUGF]
1482151
1482227
+
Met
CAT
[ENA]
¡û
>W1511433392
JUHE01000001
Betaproteobacteria
Methylophilus sp. Q8 [JUHE]
1803981
1804057
+
Met
CAT
[ENA]
¡û
>W1511433522
JUHH01000001
Betaproteobacteria
Methylotenera sp. G11 [JUHH]
41141
41217
+
Met
CAT
[ENA]
¡û
>W1610740433
LMQQ01000003
Betaproteobacteria
Methylophilus sp. Leaf414 [LMQQ]
459285
459361
+
Met
CAT
[ENA]
¡û
>W1610740510
LMQS01000002
Betaproteobacteria
Methylophilus sp. Leaf416 [LMQS]
6252
6176
-
Met
CAT
[ENA]
¡û
>W1610740745
LMQX01000009
Betaproteobacteria
Methylophilus sp. Leaf459 [LMQX]
327
251
-
Met
CAT
[ENA]
¡û
>W1610753563
LNEP01000004
Betaproteobacteria
Betaproteobacteria bacterium Ga0077540 [LNEP]
274
198
-
Met
CAT
[ENA]
¡û
>W1710520788
FNFX01000003
Betaproteobacteria
Methylophilus rhizosphaerae [FNFX]
530431
530507
+
Met
CAT
[ENA]
¡û
Identical group No.283585 (123 seq.)
>W1710860998
LMDI01000010
Betaproteobacteria
Rhizobacter sp. Root1221 [LMDI]
124385
124309
-
Met
CAT
[ENA]
¡û
>W1710944112
LOQE01000004
Betaproteobacteria
Tepidimonas taiwanensis [LOQE]
70752
70676
-
Met
CAT
[ENA]
¡û
>W1711259900
LYVQ01000014
Betaproteobacteria
Pelomonas sp. KK5 [LYVQ]
23813
23889
+
Met
CAT
[ENA]
¡û
>W1711268821
LZDH01000056
Betaproteobacteria
Tepidimonas fonticaldi [LZDH]
59059
58983
-
Met
CAT
[ENA]
¡û
>W1711394920
MESO01000024
Betaproteobacteria
Burkholderiales bacterium RIFOXYC12_FULL_65_23 [MESO]
1522
1446
-
Met
CAT
[ENA]
¡û
>W1712102922
NIOE01000013
Betaproteobacteria
Roseateles noduli HZ7 [NIOE]
245421
245345
-
Met
CAT
[ENA]
¡û
>W1712103023
NIOG01000003
Betaproteobacteria
Roseateles terrae [NIOG]
336113
336189
+
Met
CAT
[ENA]
¡û
>W131236686
AUMO01000017
Betaproteobacteria
Azohydromonas australica DSM 1124 [AUMO]
247206
247282
+
Met
CAT
[ENA]
¡û
>WENV180016270
FSUN01000076
[FSUN] metagenome; soil
8
84
+
Met
CAT
[ENA]
¢þ
>WENV180016520
FSVG01001630
[FSVG] metagenome; soil
18
94
+
Met
CAT
[ENA]
¢þ
>WENV180016531
FSVG01001877
[FSVG] metagenome; soil
12
88
+
Met
CAT
[ENA]
¢þ
>WENV180016717
FSVW01000085
[FSVW] metagenome; soil
22
98
+
Met
CAT
[ENA]
¢þ
>WENV180016797
FSVW01002296
[FSVW] metagenome; soil
1769
1845
+
Met
CAT
[ENA]
¢þ
>WENV180016854
FSVX01000585
[FSVX] metagenome; soil
3103
3027
-
Met
CAT
[ENA]
¢þ
>WENV180016867
FSVX01001301
[FSVX] metagenome; soil
18
94
+
Met
CAT
[ENA]
¢þ
>WENV180016921
FSWB01000285
[FSWB] metagenome; soil
23
99
+
Met
CAT
[ENA]
¢þ
>WENV180017180
FSWO01000004
[FSWO] metagenome; soil
3392
3316
-
Met
CAT
[ENA]
¢þ
>WENV180017786
FSXQ01002307
[FSXQ] metagenome; soil
2667
2743
+
Met
CAT
[ENA]
¢þ
>WENV180017854
FSXQ01004816
[FSXQ] metagenome; soil
75
1
-
Met
CAT
[ENA]
¢þ
>WENV180018531
FSZR01000431
[FSZR] metagenome; soil
17702
17626
-
Met
CAT
[ENA]
¢þ
>WENV180018569
FSZS01000118
[FSZS] metagenome; soil
15692
15616
-
Met
CAT
[ENA]
¢þ
>WENV180019387
FTBV01000797
[FTBV] metagenome; soil
4092
4016
-
Met
CAT
[ENA]
¢þ
>WENV180019392
FTBV01000899
[FTBV] metagenome; soil
8544
8468
-
Met
CAT
[ENA]
¢þ
>WENV180019395
FTBV01001024
[FTBV] metagenome; soil
7722
7646
-
Met
CAT
[ENA]
¢þ
>WENV180019424
FTBV01002123
[FTBV] metagenome; soil
3524
3600
+
Met
CAT
[ENA]
¢þ
>WENV180019721
FTCK01000261
[FTCK] metagenome; soil
3887
3811
-
Met
CAT
[ENA]
¢þ
>WENV180020947
FTDG01003317
[FTDG] metagenome; soil
29
105
+
Met
CAT
[ENA]
¢þ
>WENV180020963
FTDG01003712
[FTDG] metagenome; soil
1230
1306
+
Met
CAT
[ENA]
¢þ
>WENV180022994
FTHB01000402
[FTHB] metagenome; soil
41423
41347
-
Met
CAT
[ENA]
¢þ
>WENV180023892
FTIF01003478
[FTIF] metagenome; soil
7
83
+
Met
CAT
[ENA]
¢þ
>WENV180023986
FTIF01005701
[FTIF] metagenome; soil
7
83
+
Met
CAT
[ENA]
¢þ
>WENV180024046
FTIF01014702
[FTIF] metagenome; soil
169
245
+
Met
CAT
[ENA]
¢þ
>WENV180024060
FTIF01018963
[FTIF] metagenome; soil
14332
14256
-
Met
CAT
[ENA]
¢þ
>WENV180024190
FTIF01171278
[FTIF] metagenome; soil
469
545
+
Met
CAT
[ENA]
¢þ
>WENV180024873
FTIJ01324905
[FTIJ] metagenome; soil
77
1
-
Met
CAT
[ENA]
¢þ
>WENV180025229
FTIN01005482
[FTIN] metagenome; soil
2630
2554
-
Met
CAT
[ENA]
¢þ
>WENV180025236
FTIN01009889
[FTIN] metagenome; soil
978
902
-
Met
CAT
[ENA]
¢þ
>WENV180025245
FTIN01018043
[FTIN] metagenome; soil
840
916
+
Met
CAT
[ENA]
¢þ
>WENV180025359
FTIP01000254
[FTIP] metagenome; soil
32
108
+
Met
CAT
[ENA]
¢þ
>WENV180025388
FTIP01000964
[FTIP] metagenome; soil
3672
3596
-
Met
CAT
[ENA]
¢þ
>WENV180025390
FTIP01001045
[FTIP] metagenome; soil
69
145
+
Met
CAT
[ENA]
¢þ
>WENV180025397
FTIP01001381
[FTIP] metagenome; soil
1825
1749
-
Met
CAT
[ENA]
¢þ
>WENV180025398
FTIP01001381
[FTIP] metagenome; soil
1639
1563
-
Met
CAT
[ENA]
¢þ
>WENV180025457
FTIP01006697
[FTIP] metagenome; soil
1059
983
-
Met
CAT
[ENA]
¢þ
>WENV180025491
FTIP01021188
[FTIP] metagenome; soil
29
105
+
Met
CAT
[ENA]
¢þ
>WENV180025492
FTIP01021355
[FTIP] metagenome; soil
844
768
-
Met
CAT
[ENA]
¢þ
>WENV180025538
FTIP01045542
[FTIP] metagenome; soil
69
145
+
Met
CAT
[ENA]
¢þ
>WENV180025547
FTIP01048776
[FTIP] metagenome; soil
1017
941
-
Met
CAT
[ENA]
¢þ
>WENV180025584
FTIP01093892
[FTIP] metagenome; soil
18
94
+
Met
CAT
[ENA]
¢þ
>WENV180025587
FTIP01095226
[FTIP] metagenome; soil
21
97
+
Met
CAT
[ENA]
¢þ
>WENV180025625
FTIP01168516
[FTIP] metagenome; soil
7792
7716
-
Met
CAT
[ENA]
¢þ
>WENV180025810
FTIQ01160005
[FTIQ] metagenome; soil
13
89
+
Met
CAT
[ENA]
¢þ
>WENV180025914
FTIR01000099
[FTIR] metagenome; soil
525
601
+
Met
CAT
[ENA]
¢þ
>WENV180025960
FTIR01000918
[FTIR] metagenome; soil
180
256
+
Met
CAT
[ENA]
¢þ
>WENV180026029
FTIR01002793
[FTIR] metagenome; soil
174
250
+
Met
CAT
[ENA]
¢þ
>WENV180027823
FTIZ01122789
[FTIZ] metagenome; soil
9
85
+
Met
CAT
[ENA]
¢þ
>WENV180029261
FTJI01301149
[FTJI] metagenome; soil
129
205
+
Met
CAT
[ENA]
¢þ
>WENV180030588
FTJN01000580
[FTJN] metagenome; soil
12922
12846
-
Met
CAT
[ENA]
¢þ
>WENV180032559
FTKB01214086
[FTKB] metagenome; soil
171
95
-
Met
CAT
[ENA]
¢þ
>WENV180032716
FTKD01000071
[FTKD] metagenome; soil
205
281
+
Met
CAT
[ENA]
¢þ
>WENV180032782
FTKD01000836
[FTKD] metagenome; soil
18922
18846
-
Met
CAT
[ENA]
¢þ
>WENV180032923
FTKD01004889
[FTKD] metagenome; soil
2591
2667
+
Met
CAT
[ENA]
¢þ
>WENV180034783
FTKR01309239
[FTKR] metagenome; soil
129
205
+
Met
CAT
[ENA]
¢þ
>WENV180035104
FTKT01001875
[FTKT] metagenome; soil
5871
5795
-
Met
CAT
[ENA]
¢þ
>WENV180035128
FTKT01002483
[FTKT] metagenome; soil
8704
8628
-
Met
CAT
[ENA]
¢þ
>WENV180035150
FTKT01002925
[FTKT] metagenome; soil
180
256
+
Met
CAT
[ENA]
¢þ
>WENV180035248
FTKT01034374
[FTKT] metagenome; soil
18648
18572
-
Met
CAT
[ENA]
¢þ
>WENV180035251
FTKT01035302
[FTKT] metagenome; soil
519
595
+
Met
CAT
[ENA]
¢þ
>WENV180285485
OBID01454343
[OBID] metagenome; sludge
61
137
+
Met
CAT
[ENA]
¢þ
>WENV180558399
OCJY01050972
[OCJY] human gut metagenome; human gut
182
258
+
Met
CAT
[ENA]
¢þ
>WENV181373446
OFQX01065006
[OFQX] wastewater metagenome; WWTP Novara (Effluent)
315
239
-
Met
CAT
[ENA]
¢þ
>WENV181411746
OGCI01042975
[OGCI] hot springs metagenome; Hot spring water
974
1050
+
Met
CAT
[ENA]
¢þ
>WENV181415303
OGCL01007551
[OGCL] hot springs metagenome; Hot spring water
1164
1240
+
Met
CAT
[ENA]
¢þ
>W141234417
BAWN01000021
Betaproteobacteria
Serpentinimonas barnesii H1 [BAWN]
45241
45317
+
Met
CAT
[ENA]
¡û
>C08005965
CP001013
Betaproteobacteria
Leptothrix cholodnii SP-6 [CP001013]
634137
634064
-
Met
CAT
[Ensembl]
¡û
>WENV183697147
OUNJ010018946
[OUNJ] metagenome; soil
116
192
+
Met
CAT
[ENA]
¢þ
>WENV183726500
PJQF01229521
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
95
19
-
Met
CAT
[ENA]
¢þ
>WENV170012288
APMI01147007
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
766
690
-
Met
CAT
[ENA]
¢þ
>WENV170018690
BBPD01000373
[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
6225
6301
+
Met
CAT
[ENA]
¢þ
>WENV170018984
BBPD01002843
[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
787
711
-
Met
CAT
[ENA]
¢þ
>WENV170019874
BBPE01001123
[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
12186
12110
-
Met
CAT
[ENA]
¢þ
>WENV170019901
BBPE01001298
[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
423
499
+
Met
CAT
[ENA]
¢þ
>WENV170019902
BBPE01001299
[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
425
501
+
Met
CAT
[ENA]
¢þ
>WENV170554726
CXWK01087316
[CXWK] wastewater metagenome; activated sludge
320
396
+
Met
CAT
[ENA]
¢þ
>WENV170714205
LNFM01060518
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
1021
945
-
Met
CAT
[ENA]
¢þ
>WENV170770485
LXNH01107211
[LXNH] seawater metagenome; marine seawater
125
49
-
Met
CAT
[ENA]
¢þ
>C181064537
CP022423
Betaproteobacteria
Vitreoscilla filiformis ATCC 15551 [CP022423]
3288825
3288901
+
Met
CAT
-
¡û
>C181176231
CP029210
Betaproteobacteria
Aquabacterium olei NBRC 110486 [CP029210]
696378
696302
-
Met
CAT
-
¡û
>C191182066
CP040709
Betaproteobacteria
Inhella inkyongensis IMCC1713 [CP040709]
3161403
3161479
+
Met
CAT
-
¡û
>W1910699945
MESA01000039
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA]
539
463
-
Met
CAT
[ENA]
¡û
>W1910700322
MESK01000023
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK]
541
465
-
Met
CAT
[ENA]
¡û
>W1911647472
QAJN01000002
Betaproteobacteria
Paucibacter sp. KBW04 [QAJN]
253526
253602
+
Met
CAT
[ENA]
¡û
>W1911774989
QXMG01000001
Betaproteobacteria
Caldimonas tepidiphila YIM 730274 [QXMG]
280916
280992
+
Met
CAT
[ENA]
¡û
>W1810081331
PEOG01000005
Betaproteobacteria
Roseateles chitinivorans HWN-4 [PEOG]
5985
5909
-
Met
CAT
[ENA]
¡û
>W1810222835
POSP01000003
Betaproteobacteria
Paucibacter aquatile CR182 [POSP]
1701021
1701097
+
Met
CAT
[ENA]
¡û
>SRA1004033
SRR002328.105765
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
105
29
-
Met
CAT
[SRA]
>SRA1004158
SRR002328.176774
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
145
221
+
Met
CAT
[SRA]
>W1810355016
PVLQ01000087
Betaproteobacteria
Malikia granosa P1 [PVLQ]
7439
7515
+
Met
CAT
[ENA]
¡û
>W1810355082
PVLR01000058
Betaproteobacteria
Malikia spinosa 83 [PVLR]
545
469
-
Met
CAT
[ENA]
¡û
>W1810475775
QAJF01001397
Betaproteobacteria
Pelomonas sp. HMWF004 [QAJF]
3074
2998
-
Met
CAT
[ENA]
¡û
>W1810884623
QUMT01000001
Betaproteobacteria
Roseateles depolymerans DSM 11813 [QUMT]
322356
322280
-
Met
CAT
[ENA]
¡û
>C151002093
AP014568
Betaproteobacteria
Serpentinimonas raichei A1 [AP014568]
2023059
2023135
+
Met
CAT
[Ensembl]
¡û
>C151002161
AP014569
Betaproteobacteria
Serpentinimonas maccroryi B1 [AP014569]
220969
220893
-
Met
CAT
[Ensembl]
¡û
>ENV09001510
ABSR01021136
Freshwater sediment metagenome lwMethylamine_C1
306
382
+
Met
CAT
[ENA]
¡û
>W1511348491
JRKM01000001
Betaproteobacteria
Aquabacterium sp. NJ1 [JRKM]
1616368
1616444
+
Met
CAT
[ENA]
¡û
>W1511403222
JTKY01000024
Betaproteobacteria
Tepidimonas taiwanensis VT154-175 [JTKY]
9462
9386
-
Met
CAT
[ENA]
¡û
>W1511429885
JUEA01000128
Betaproteobacteria
Comamonadaceae bacterium BICA1-1 [JUEA]
33756
33680
-
Met
CAT
[ENA]
¡û
>W1511432373
JUGM01000001
Betaproteobacteria
Methylibium sp. CF059 [JUGM]
54503
54427
-
Met
CAT
[ENA]
¡û
>W1511552088
JZUE01000001
Betaproteobacteria
Aquincola tertiaricarbonis MIMtkpLc11 [JZUE]
500936
500860
-
Met
CAT
[ENA]
¡û
>W11187698
CAFG01000526
Betaproteobacteria
Mitsuaria sp. H24L5A [CAFG]
1113
1189
+
Met
CAT
[ENA]
¡û
>C161059548
CP013692
Betaproteobacteria
Paucibacter sp. KCTC 42545 [CP013692]
3314318
3314394
+
Met
CAT
[Ensembl]
¡û
>C161060295
CP013729
Betaproteobacteria
Roseateles depolymerans KCTC 42856 [CP013729]
4845436
4845512
+
Met
CAT
[Ensembl]
¡û
>W121036364
AHLZ01000003
Betaproteobacteria
Burkholderiales bacterium JOSHI_001 [AHLZ]
415614
415690
+
Met
CAT
[ENA]
¡û
>W121127059
CAFG01000526
Betaproteobacteria
Mitsuaria sp. H24L5A [CAFG]
1113
1189
+
Met
CAT
[ENA]
¡û
>W1610076249
BCYP01000018
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
349076
349000
-
Met
CAT
[ENA]
¡û
>W1610604909
LFRI01000386
Betaproteobacteria
Aquabacterium parvum [LFRI]
376070
375994
-
Met
CAT
[ENA]
¡û
>W1610723344
LMDI01000010
Betaproteobacteria
Rhizobacter sp. Root1221 [LMDI]
124385
124309
-
Met
CAT
[ENA]
¡û
>W1610800412
LOQE01000004
Betaproteobacteria
Tepidimonas taiwanensis [LOQE]
70752
70676
-
Met
CAT
[ENA]
¡û
>W1611029633
LZDH01000056
Betaproteobacteria
Tepidimonas fonticaldi [LZDH]
59059
58983
-
Met
CAT
[ENA]
¡û
>W1710074064
BCYP01000018
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
349076
349000
-
Met
CAT
[ENA]
¡û
>W1710544457
FOAV01000002
Betaproteobacteria
Roseateles sp. YR242 [FOAV]
425597
425673
+
Met
CAT
[ENA]
¡û
>W1710575446
FOZE01000002
Betaproteobacteria
Mitsuaria sp. PDC51 [FOZE]
586906
586982
+
Met
CAT
[ENA]
¡û
>W1710726352
LFRI01000386
Betaproteobacteria
Aquabacterium parvum [LFRI]
376070
375994
-
Met
CAT
[ENA]
¡û
Identical group No.312493 (8 seq.)
>WENV180310978
OBJT01074747
[OBJT] soil metagenome; soil
331
257
-
Met
CAT
[ENA]
¢þ
>WENV180357717
OBNN01075275
[OBNN] marine metagenome; Coastal water
165
241
+
Met
CAT
[ENA]
¢þ
>WENV181170737
OEIV010081540
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
461
535
+
Met
CAT
[ENA]
¢þ
>WENV181367538
OFQB01008741
[OFQB] freshwater metagenome; Freshwater Lake
527
603
+
Met
CAT
[ENA]
¢þ
>WENV181373052
OFQX01021321
[OFQX] wastewater metagenome; WWTP Novara (Effluent)
350
426
+
Met
CAT
[ENA]
¢þ
>WENV181381218
OFRE01043364
[OFRE] wastewater metagenome; Exp Tend NO 50WW
331
407
+
Met
CAT
[ENA]
¢þ
>ENV09000714
ABSP01021748
Freshwater sediment metagenome lwMethane_C1
153
229
+
Met
CAT
[ENA]
¡û
>ENV09001581
ABSR01033167
Freshwater sediment metagenome lwMethylamine_C1
388
464
+
Met
CAT
[ENA]
¡û
Identical group No.641711 (1 seq.)
>ENV09001591
ABSR01033976
Freshwater sediment metagenome lwMethylamine_C1
100
25
-
Met
CAT
[ENA]
¡û
Identical group No.772184 (1 seq.)
>ENV09001569
ABSR01030936
Freshwater sediment metagenome lwMethylamine_C1
497
426
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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