tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = CCT

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.472868 (26 seq.)
>W1711223897 LXTQ01000001 Betaproteobacteria Methylobacillus sp. MM3 MM2 [LXTQ] 508942 509017 + Arg CCT [ENA] ¡û
>W1711340005 MCAW01000012 Betaproteobacteria Methylophilales bacterium LSUCC0135 [MCAW] 1460 1385 - Arg CCT [ENA] ¡û
>W1711387316 MEGN01000002 Betaproteobacteria Thiobacillus sp. SCN 65-179 [MEGN] 228311 228386 + Arg CCT [ENA] ¡û
>W131186189 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 1744879 1744954 + Arg CCT [ENA] ¡û
>W131186548 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 15577 15652 + Arg CCT [ENA] ¡û
>W1711504077 MKUF01000008 Betaproteobacteria Thiobacillus sp. 65-69 [MKUF] 89495 89420 - Arg CCT [ENA] ¡û
>WENV180014751 FQKF010124779 [FQKF] soil metagenome; Soil 134 59 - Arg CCT [ENA] ¢þ
>WENV180311810 OBJT01590345 [OBJT] soil metagenome; soil 98 23 - Arg CCT [ENA] ¢þ
>WENV180350783 OBLQ010010896 [OBLQ] soil metagenome; soil 730 655 - Arg CCT [ENA] ¢þ
>WENV181187816 OEOE01000034 [OEOE] activated sludge metagenome; Activated Sludge 17432 17507 + Arg CCT [ENA] ¢þ
>WENV181187824 OEOE01000062 [OEOE] activated sludge metagenome; Activated Sludge 1 76 + Arg CCT [ENA] ¢þ
>WENV181189112 OEOF01000890 [OEOF] activated sludge metagenome; Activated Sludge 2620 2695 + Arg CCT [ENA] ¢þ
>WENV181189192 OEOF01006568 [OEOF] activated sludge metagenome; Activated Sludge 217 142 - Arg CCT [ENA] ¢þ
>WENV181411738 OGCI01042296 [OGCI] hot springs metagenome; Hot spring water 863 788 - Arg CCT [ENA] ¢þ
>WENV181415365 OGCL01009051 [OGCL] hot springs metagenome; Hot spring water 132 207 + Arg CCT [ENA] ¢þ
>WENV181415957 OGCL01038554 [OGCL] hot springs metagenome; Hot spring water 1325 1250 - Arg CCT [ENA] ¢þ
>WENV181838878 OGVN01029411 [OGVN] freshwater metagenome; freshwater 115 40 - Arg CCT [ENA] ¢þ
>WENV181843372 OGVU01011262 [OGVU] freshwater metagenome; freshwater 411 486 + Arg CCT [ENA] ¢þ
>WENV181851272 OGWE01018635 [OGWE] freshwater metagenome; freshwater 226 301 + Arg CCT [ENA] ¢þ
>WENV181857409 OGWO01004092 [OGWO] freshwater metagenome; freshwater 1180 1105 - Arg CCT [ENA] ¢þ
>WENV170566491 FKKE01036510 [FKKE] freshwater metagenome; freshwater 265 340 + Arg CCT [ENA] ¢þ
>W141819365 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 2020847 2020922 + Arg CCT [ENA] ¡û
>ENV09001487 ABSR01016747 Freshwater sediment metagenome lwMethylamine_C1 507 582 + Arg CCT [ENA] ¡û
>W1511431972 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 545256 545331 + Arg CCT [ENA] ¡û
>W1511433561 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 653875 653800 - Arg CCT [ENA] ¡û
>W1611008268 LXTQ01000001 Betaproteobacteria Methylobacillus sp. MM3 MM2 [LXTQ] 508942 509017 + Arg CCT [ENA] ¡û
Identical group No.548149 (17 seq.)
>W131164729 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 890813 890888 + Arg CCT [ENA] ¡û
>WENV180391161 OBPM01024973 [OBPM] marine metagenome; ENVO:00002010 148 223 + Arg CCT [ENA] ¢þ
>WENV181380041 OFRD01023400 [OFRD] wastewater metagenome; Exp Tend CN 100WW 412 337 - Arg CCT [ENA] ¢þ
>WENV181384242 OFRH01042793 [OFRH] wastewater metagenome; Exp Tend NO 100WW 124 199 + Arg CCT [ENA] ¢þ
>WENV170609723 FUWD011478836 [FUWD] metagenome; unknown 72 147 + Arg CCT [ENA] ¢þ
>WENV170639360 JFJP01002048 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 15086 15161 + Arg CCT [ENA] ¢þ
>WENV170639575 JFJP01004934 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 794 719 - Arg CCT [ENA] ¢þ
>WENV170706181 LNAP01001558 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 15143 15068 - Arg CCT [ENA] ¢þ
>WENV170706375 LNAP01002622 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 512 437 - Arg CCT [ENA] ¢þ
>WENV170961785 MLJW01001278 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 3282 3357 + Arg CCT [ENA] ¢þ
>WENV170961928 MLJW01007643 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 19 94 + Arg CCT [ENA] ¢þ
>W1910730032 MHBU01000024 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 109766 109841 + Arg CCT [ENA] ¡û
>W1911623984 PQVH01000008 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 15405 15480 + Arg CCT [ENA] ¡û
>ENV09000770 ABSP01032944 Freshwater sediment metagenome lwMethane_C1 412 337 - Arg CCT [ENA] ¡û
>ENV09001394 ABSR01004584 Freshwater sediment metagenome lwMethylamine_C1 4142 4067 - Arg CCT [ENA] ¡û
>ENV09001511 ABSR01021395 Freshwater sediment metagenome lwMethylamine_C1 675 600 - Arg CCT [ENA] ¡û
>C10109350 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 985747 985822 + Arg CCT [Ensembl] ¡û
Identical group No.608151 (16 seq.)
>WENV183660504 ORJL010028059 [ORJL] groundwater metagenome; groundwater 356 281 - Arg CCT [ENA] ¢þ
>WENV183665347 ORJL010460640 [ORJL] groundwater metagenome; groundwater 317 392 + Arg CCT [ENA] ¢þ
>WENV183668085 ORJL010710458 [ORJL] groundwater metagenome; groundwater 1703 1628 - Arg CCT [ENA] ¢þ
>WENV183668409 ORJL010737770 [ORJL] groundwater metagenome; groundwater 20745 20820 + Arg CCT [ENA] ¢þ
>WENV183669978 ORJL010894825 [ORJL] groundwater metagenome; groundwater 364 289 - Arg CCT [ENA] ¢þ
>WENV183674533 ORJL011399995 [ORJL] groundwater metagenome; groundwater 71 146 + Arg CCT [ENA] ¢þ
>WENV183677287 ORJL011735344 [ORJL] groundwater metagenome; groundwater 347 422 + Arg CCT [ENA] ¢þ
>WENV183678825 ORJL011928214 [ORJL] groundwater metagenome; groundwater 293 368 + Arg CCT [ENA] ¢þ
>WENV183680552 ORMF010196537 [ORMF] groundwater metagenome; groundwater 26089 26014 - Arg CCT [ENA] ¢þ
>WENV183681914 ORMF010376020 [ORMF] groundwater metagenome; groundwater 1333 1408 + Arg CCT [ENA] ¢þ
>WENV183681999 ORMF010386247 [ORMF] groundwater metagenome; groundwater 28 103 + Arg CCT [ENA] ¢þ
>WENV183687299 ORMF011124509 [ORMF] groundwater metagenome; groundwater 306 231 - Arg CCT [ENA] ¢þ
>WENV183692489 ORMF011924992 [ORMF] groundwater metagenome; groundwater 1365 1290 - Arg CCT [ENA] ¢þ
>WENV183695068 ORMF012329835 [ORMF] groundwater metagenome; groundwater 282 357 + Arg CCT [ENA] ¢þ
>WENV183696582 ORMF012578621 [ORMF] groundwater metagenome; groundwater 2325 2250 - Arg CCT [ENA] ¢þ
>ENV09001596 ABSR01034880 Freshwater sediment metagenome lwMethylamine_C1 528 453 - Arg CCT [ENA] ¡û
Identical group No.627029 (2 seq.)
>WENV170559089 CXWL01109771 [CXWL] groundwater metagenome; biofilm material 2676 2751 + Arg CCT [ENA] ¢þ
>ENV09001579 ABSR01032985 Freshwater sediment metagenome lwMethylamine_C1 112 187 + Arg CCT [ENA] ¡û
Identical group No.641696 (2 seq.)
>ENV09001369 ABSR01003691 Freshwater sediment metagenome lwMethylamine_C1 4956 4881 - Arg CCT [ENA] ¡û
>ENV09001427 ABSR01006632 Freshwater sediment metagenome lwMethylamine_C1 1696 1771 + Arg CCT [ENA] ¡û
Identical group No.711901 (2 seq.)
>W1910700253 MESI01000111 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 [MESI] 6816 6890 + Arg CCT [ENA] ¡û
>ENV09001515 ABSR01022732 Freshwater sediment metagenome lwMethylamine_C1 275 349 + Arg CCT [ENA] ¡û
Identical group No.753853 (4 seq.)
>WENV181379623 OFRD01004229 [OFRD] wastewater metagenome; Exp Tend CN 100WW 502 428 - Arg CCT [ENA] ¢þ
>ENV09001557 ABSR01028976 Freshwater sediment metagenome lwMethylamine_C1 130 56 - Arg CCT [ENA] ¡û
>W1610074371 BCWP01000039 Betaproteobacteria Curvibacter delicatus NBRC 14919 [BCWP] 26225 26299 + Arg CCT [ENA] ¡û
>W1710071489 BCWP01000039 Betaproteobacteria Curvibacter delicatus NBRC 14919 [BCWP] 26225 26299 + Arg CCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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