tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = GCA

HIT: 5 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.772181 (1 seq.)
>ENV09001528 ABSR01024612 Freshwater sediment metagenome lwMethylamine_C1 774 848 + Cys GCA [ENA] ¡û
Identical group No.779480 (15 seq.)
>WENV180097525 MTBK01194003 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 460 387 - Cys GCA [ENA] ¢þ
>WENV181188063 OEOE01018604 [OEOE] activated sludge metagenome; Activated Sludge 596 669 + Cys GCA [ENA] ¢þ
>WENV181189294 OEOF01019788 [OEOF] activated sludge metagenome; Activated Sludge 568 641 + Cys GCA [ENA] ¢þ
>WENV181379508 OFRD01002393 [OFRD] wastewater metagenome; Exp Tend CN 100WW 3522 3595 + Cys GCA [ENA] ¢þ
>WENV181400686 OFSF01018302 [OFSF] wastewater metagenome; Exp Tend VB 100WW 928 1001 + Cys GCA [ENA] ¢þ
>WENV170558924 CXWL01100330 [CXWL] groundwater metagenome; biofilm material 7759 7832 + Cys GCA [ENA] ¢þ
>WENV170601278 FUWD010164998 [FUWD] metagenome; unknown 183 256 + Cys GCA [ENA] ¢þ
>WENV170706044 LNAP01000968 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 31423 31496 + Cys GCA [ENA] ¢þ
>WENV170961468 MLJW01000057 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 107714 107787 + Cys GCA [ENA] ¢þ
>C151104084 LN794158 Betaproteobacteria Candidatus Methylopumilus turicensis MMS-10A-171 [LN794158] 1026708 1026635 - Cys GCA [Ensembl] ¡û
>ENV09001222 ABSQ01052576 Freshwater sediment metagenome lwMethenol_C1 675 748 + Cys GCA [ENA] ¡û
>ENV09001520 ABSR01024042 Freshwater sediment metagenome lwMethylamine_C1 435 362 - Cys GCA [ENA] ¡û
>ENV09001595 ABSR01034670 Freshwater sediment metagenome lwMethylamine_C1 364 437 + Cys GCA [ENA] ¡û
>C10109347 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 794849 794922 + Cys GCA [Ensembl] ¡û
>W1511433556 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 973386 973313 - Cys GCA [ENA] ¡û
Identical group No.780738 (49 seq.)
>W1710878090 LMQQ01000004 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 484179 484252 + Cys GCA [ENA] ¡û
>W1710878175 LMQS01000005 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 33050 33123 + Cys GCA [ENA] ¡û
>W1710878406 LMQX01000015 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 297920 297847 - Cys GCA [ENA] ¡û
>W1710893307 LNEP01000007 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 65122 65195 + Cys GCA [ENA] ¡û
>W131163887 ARAC01000001 Betaproteobacteria Methylophilus sp. 42 [ARAC] 1829544 1829471 - Cys GCA [ENA] ¡û
>W131164762 ARBA01000003 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 67402 67329 - Cys GCA [ENA] ¡û
>W131170299 ARFK01000006 Betaproteobacteria Methylophilus sp. 1 [ARFK] 254847 254774 - Cys GCA [ENA] ¡û
>W131176233 ARJW01000014 Betaproteobacteria Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW] 34503 34576 + Cys GCA [ENA] ¡û
>W131186187 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 1708191 1708264 + Cys GCA [ENA] ¡û
>W131186412 ARWC01000001 Betaproteobacteria Methylotenera sp. 1P/1 [ARWC] 1047107 1047034 - Cys GCA [ENA] ¡û
>W131186562 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 2587661 2587734 + Cys GCA [ENA] ¡û
>W1711340003 MCAW01000012 Betaproteobacteria Methylophilales bacterium LSUCC0135 [MCAW] 3733 3660 - Cys GCA [ENA] ¡û
>C013398 CP000284 Betaproteobacteria Methylobacillus flagellatus KT [CP000284] 1943669 1943596 - Cys GCA [Ensembl] ¡û
>WENV180591842 OCOV01118864 [OCOV] marine metagenome; ENVO:01000301 345 272 - Cys GCA [ENA] ¢þ
>WENV181187820 OEOE01000042 [OEOE] activated sludge metagenome; Activated Sludge 9905 9832 - Cys GCA [ENA] ¢þ
>WENV181189056 OEOF01000074 [OEOF] activated sludge metagenome; Activated Sludge 12275 12202 - Cys GCA [ENA] ¢þ
>WENV181222650 OFDC01000048 [OFDC] hot springs metagenome; Water 150112 150185 + Cys GCA [ENA] ¢þ
>WENV181222670 OFDC01000068 [OFDC] hot springs metagenome; Water 36186 36259 + Cys GCA [ENA] ¢þ
>WENV181227144 OFDN01002328 [OFDN] hot springs metagenome; Water 10512 10439 - Cys GCA [ENA] ¢þ
>W141220082 AZXN01000002 Betaproteobacteria Methylophilus sp. 5 [AZXN] 275809 275736 - Cys GCA [ENA] ¡û
>W141231925 BAUS01000012 Betaproteobacteria Methylophilus sp. OH31 [BAUS] 38634 38707 + Cys GCA [ENA] ¡û
>W141350157 JCKJ01000001 Betaproteobacteria Methylophilaceae bacterium 11 [JCKJ] 1924472 1924399 - Cys GCA [ENA] ¡û
>WENV170654510 JRYL01000167 [JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different 85 158 + Cys GCA [ENA] ¢þ
>WENV170705933 LNAP01000675 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 42514 42587 + Cys GCA [ENA] ¢þ
>WENV170709558 LNFM01000469 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 21 94 + Cys GCA [ENA] ¢þ
>WENV170709855 LNFM01000809 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 65098 65171 + Cys GCA [ENA] ¢þ
>WENV170712528 LNFM01014456 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 21 94 + Cys GCA [ENA] ¢þ
>WENV170713514 LNFM01033523 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 337 410 + Cys GCA [ENA] ¢þ
>WENV170713567 LNFM01034863 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 3983 3910 - Cys GCA [ENA] ¢þ
>W09101006 AADX02000003 Betaproteobacteria Methylobacillus flagellatus KT [AADX] 29585 29512 - Cys GCA [ENA] ¡û
>W141819388 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 67688 67615 - Cys GCA [ENA] ¡û
>C09107567 CP001674 Betaproteobacteria Methylovorus glucosotrophus SIP3-4 [CP001674] 1057746 1057819 + Cys GCA [Ensembl] ¡û
>C09107791 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 827348 827421 + Cys GCA [Ensembl] ¡û
>W1910547730 FZOA01000002 Betaproteobacteria Methylobacillus rhizosphaerae Ca-68 [FZOA] 51011 51084 + Cys GCA [ENA] ¡û
>W1910730048 MHBU01000034 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 8746 8673 - Cys GCA [ENA] ¡û
>W1911624012 PQVH01000015 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 8479 8406 - Cys GCA [ENA] ¡û
>C151089467 CP012020 Betaproteobacteria Methylophilus sp. TWE2 [CP012020] 1877262 1877189 - Cys GCA [Ensembl] ¡û
>ENV09001314 ABSR01001251 Freshwater sediment metagenome lwMethylamine_C1 133 60 - Cys GCA [ENA] ¡û
>ENV09001366 ABSR01003429 Freshwater sediment metagenome lwMethylamine_C1 967 1040 + Cys GCA [ENA] ¡û
>ENV09001407 ABSR01005637 Freshwater sediment metagenome lwMethylamine_C1 2898 2971 + Cys GCA [ENA] ¡û
>C11114202 CP002252 Betaproteobacteria Methylovorus sp. MP688 [CP002252] 1043693 1043766 + Cys GCA [Ensembl] ¡û
>W1511431988 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 1579850 1579777 - Cys GCA [ENA] ¡û
>W1511432036 JUGF01000002 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 16307 16234 - Cys GCA [ENA] ¡û
>W1511433396 JUHE01000001 Betaproteobacteria Methylophilus sp. Q8 [JUHE] 2285815 2285888 + Cys GCA [ENA] ¡û
>W1610740436 LMQQ01000004 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 484179 484252 + Cys GCA [ENA] ¡û
>W1610740521 LMQS01000005 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 33050 33123 + Cys GCA [ENA] ¡û
>W1610740752 LMQX01000015 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 297920 297847 - Cys GCA [ENA] ¡û
>W1610753573 LNEP01000007 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 65122 65195 + Cys GCA [ENA] ¡û
>W1710520777 FNFX01000001 Betaproteobacteria Methylophilus rhizosphaerae [FNFX] 327213 327140 - Cys GCA [ENA] ¡û
Identical group No.791147 (9 seq.)
>WENV180354126 OBLQ011396487 [OBLQ] soil metagenome; soil 98 171 + Cys GCA [ENA] ¢þ
>WENV181186090 OEMN01000165 [OEMN] metagenome; 1998 1389 1462 + Cys GCA [ENA] ¢þ
>WENV183683471 ORMF010580381 [ORMF] groundwater metagenome; groundwater 2 75 + Cys GCA [ENA] ¢þ
>WENV183689063 ORMF011385823 [ORMF] groundwater metagenome; groundwater 322 395 + Cys GCA [ENA] ¢þ
>W1910697512 MEKU01000048 Acidobacteriota Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21 [MEKU] 38788 38715 - Cys GCA [ENA] ¡û
>W1910697585 MEKW01000015 Acidobacteriota Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 [MEKW] 6656 6583 - Cys GCA [ENA] ¡û
>W1910697836 MELD01000068 Acidobacteriota Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14 [MELD] 4071 3998 - Cys GCA [ENA] ¡û
>W1910697915 MELF01000029 Acidobacteriota Acidobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 [MELF] 97530 97603 + Cys GCA [ENA] ¡û
>ENV09001465 ABSR01012193 Freshwater sediment metagenome lwMethylamine_C1 412 339 - Cys GCA [ENA] ¡û
Identical group No.834010 (1 seq.)
>ENV09001486 ABSR01016450 Freshwater sediment metagenome lwMethylamine_C1 538 465 - Cys GCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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