tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = GCT

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8068 (1 seq.)
>ENV09001478 ABSR01015105 Freshwater sediment metagenome lwMethylamine_C1 368 275 - Ser GCT [ENA] ¡û
Identical group No.8226 (33 seq.)
>W1710893311 LNEP01000012 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 96063 95970 - Ser GCT [ENA] ¡û
>W131164744 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 232142 232049 - Ser GCT [ENA] ¡û
>W131186182 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 299072 299165 + Ser GCT [ENA] ¡û
>W131186409 ARWC01000001 Betaproteobacteria Methylotenera sp. 1P/1 [ARWC] 1415242 1415149 - Ser GCT [ENA] ¡û
>W131186557 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 1178547 1178640 + Ser GCT [ENA] ¡û
>WENV181187817 OEOE01000039 [OEOE] activated sludge metagenome; Activated Sludge 14518 14425 - Ser GCT [ENA] ¢þ
>WENV181189047 OEOF01000034 [OEOF] activated sludge metagenome; Activated Sludge 22364 22271 - Ser GCT [ENA] ¢þ
>WENV181222660 OFDC01000054 [OFDC] hot springs metagenome; Water 60144 60051 - Ser GCT [ENA] ¢þ
>WENV181226718 OFDN01000020 [OFDN] hot springs metagenome; Water 153439 153532 + Ser GCT [ENA] ¢þ
>WENV181384197 OFRH01035099 [OFRH] wastewater metagenome; Exp Tend NO 100WW 283 190 - Ser GCT [ENA] ¢þ
>WENV181400533 OFSF01009622 [OFSF] wastewater metagenome; Exp Tend VB 100WW 746 653 - Ser GCT [ENA] ¢þ
>W141350154 JCKJ01000001 Betaproteobacteria Methylophilaceae bacterium 11 [JCKJ] 2293123 2293030 - Ser GCT [ENA] ¡û
>WENV170559158 CXWL01112316 [CXWL] groundwater metagenome; biofilm material 1067 1160 + Ser GCT [ENA] ¢þ
>WENV170577525 FSSH01000116 [FSSH] freshwater metagenome; drinking water 271863 271956 + Ser GCT [ENA] ¢þ
>WENV170705482 LNAO01000930 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 3299 3206 - Ser GCT [ENA] ¢þ
>WENV170706208 LNAP01001687 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1050 957 - Ser GCT [ENA] ¢þ
>WENV170706209 LNAP01001689 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 227 134 - Ser GCT [ENA] ¢þ
>WENV170961568 MLJW01000169 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 9164 9071 - Ser GCT [ENA] ¢þ
>WENV170961680 MLJW01000485 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 1903 1996 + Ser GCT [ENA] ¢þ
>W141819379 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1419258 1419165 - Ser GCT [ENA] ¡û
>W1910730035 MHBU01000027 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 82980 83073 + Ser GCT [ENA] ¡û
>C09107801 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 2074601 2074694 + Ser GCT [Ensembl] ¡û
>W1911624008 PQVH01000013 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 44796 44889 + Ser GCT [ENA] ¡û
>C151104076 LN794158 Betaproteobacteria Candidatus Methylopumilus turicensis MMS-10A-171 [LN794158] 1384997 1385090 + Ser GCT [Ensembl] ¡û
>ENV09000674 ABSP01013679 Freshwater sediment metagenome lwMethane_C1 587 680 + Ser GCT [ENA] ¡û
>ENV09000929 ABSQ01000490 Freshwater sediment metagenome lwMethenol_C1 605 512 - Ser GCT [ENA] ¡û
>ENV09001293 ABSR01000664 Freshwater sediment metagenome lwMethylamine_C1 870 777 - Ser GCT [ENA] ¡û
>ENV09001331 ABSR01001872 Freshwater sediment metagenome lwMethylamine_C1 970 877 - Ser GCT [ENA] ¡û
>ENV09001345 ABSR01002384 Freshwater sediment metagenome lwMethylamine_C1 2465 2558 + Ser GCT [ENA] ¡û
>W1511431985 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 1960937 1960844 - Ser GCT [ENA] ¡û
>W1511432031 JUGF01000002 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 1252291 1252198 - Ser GCT [ENA] ¡û
>W1511433545 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 2292730 2292637 - Ser GCT [ENA] ¡û
>W1610753577 LNEP01000012 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 96063 95970 - Ser GCT [ENA] ¡û
Identical group No.14154 (3 seq.)
>WENV180353421 OBLQ010760028 [OBLQ] soil metagenome; soil 28 120 + Ser GCT [ENA] ¢þ
>WENV170563555 CZCB01021433 [CZCB] anaerobic digester metagenome; anaerobic digester 401 309 - Ser GCT [ENA] ¢þ
>ENV09001489 ABSR01017190 Freshwater sediment metagenome lwMethylamine_C1 196 288 + Ser GCT [ENA] ¡û
Identical group No.71224 (1 seq.)
>ENV09001453 ABSR01010455 Freshwater sediment metagenome lwMethylamine_C1 16 105 + Ser GCT [ENA] ¡û
Identical group No.71225 (1 seq.)
>ENV09001536 ABSR01025455 Freshwater sediment metagenome lwMethylamine_C1 88 177 + Ser GCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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