tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = TCT

HIT: 10 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.268730 (1 seq.)
>ENV09001544 ABSR01027043 Freshwater sediment metagenome lwMethylamine_C1 208 285 + Arg TCT [ENA] ¡û
Identical group No.270857 (64 seq.)
>W1710893299 LNEP01000005 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 42666 42590 - Arg TCT [ENA] ¡û
>W1711224663 LXUF01000011 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 551215 551139 - Arg TCT [ENA] ¡û
>W1711414497 MGZO01000020 Hydrogenophilia Hydrogenophilales bacterium RIFOXYD1_FULL_62_11 [MGZO] 31899 31823 - Arg TCT [ENA] ¡û
>W1711680556 MRWL01000383 Betaproteobacteria Sulfuricella sp. BIN3 [MRWL] 872 948 + Arg TCT [ENA] ¡û
>C171116296 CP021138 Betaproteobacteria Sulfuriferula sp. AH1 [CP021138] 1996459 1996535 + Arg TCT - ¡û
>W131164749 ARBA01000003 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 660226 660150 - Arg TCT [ENA] ¡û
>W131186395 ARWC01000001 Betaproteobacteria Methylotenera sp. 1P/1 [ARWC] 2049302 2049378 + Arg TCT [ENA] ¡û
>W131214596 ATUI01000001 Betaproteobacteria Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 [ATUI] 433 509 + Arg TCT [ENA] ¡û
>C013372 CP000284 Betaproteobacteria Methylobacillus flagellatus KT [CP000284] 80072 80148 + Arg TCT [Ensembl] ¡û
>WENV180099061 MTBK01284931 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 1342 1418 + Arg TCT [ENA] ¢þ
>WENV180252618 OBEQ010464439 [OBEQ] groundwater metagenome; groundwater 4064 3988 - Arg TCT [ENA] ¢þ
>WENV180268760 OBEQ012000275 [OBEQ] groundwater metagenome; groundwater 607 683 + Arg TCT [ENA] ¢þ
>WENV181189050 OEOF01000037 [OEOF] activated sludge metagenome; Activated Sludge 13346 13422 + Arg TCT [ENA] ¢þ
>WENV181222620 OFDC01000032 [OFDC] hot springs metagenome; Water 185550 185474 - Arg TCT [ENA] ¢þ
>WENV181384225 OFRH01039095 [OFRH] wastewater metagenome; Exp Tend NO 100WW 225 301 + Arg TCT [ENA] ¢þ
>WENV181835512 OGVI01002081 [OGVI] freshwater metagenome; freshwater 487 563 + Arg TCT [ENA] ¢þ
>WENV181843210 OGVU01003267 [OGVU] freshwater metagenome; freshwater 195 271 + Arg TCT [ENA] ¢þ
>W141229542 BAMT01000006 Betaproteobacteria Methylobacillus glycogenes JCM 2850 [BAMT] 10780 10856 + Arg TCT [ENA] ¡û
>W141350136 JCKJ01000001 Betaproteobacteria Methylophilaceae bacterium 11 [JCKJ] 120219 120295 + Arg TCT [ENA] ¡û
>WENV183683922 ORMF010638506 [ORMF] groundwater metagenome; groundwater 90914 90838 - Arg TCT [ENA] ¢þ
>WENV183726884 PJTO01000354 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 15541 15465 - Arg TCT [ENA] ¢þ
>WENV183729443 PJTQ01040042 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 594 518 - Arg TCT [ENA] ¢þ
>WENV183736826 PJUD01000046 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 186119 186043 - Arg TCT [ENA] ¢þ
>WENV183739359 PJUE01010561 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 360 284 - Arg TCT [ENA] ¢þ
>WENV183740517 PJUF01003002 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 2804 2880 + Arg TCT [ENA] ¢þ
>WENV170558763 CXWL01088777 [CXWL] groundwater metagenome; biofilm material 1877 1953 + Arg TCT [ENA] ¢þ
>WENV170577505 FSSH01000094 [FSSH] freshwater metagenome; drinking water 10769 10845 + Arg TCT [ENA] ¢þ
>WENV170705461 LNAO01000611 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1400 1324 - Arg TCT [ENA] ¢þ
>WENV170705719 LNAP01000146 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 3946 4022 + Arg TCT [ENA] ¢þ
>WENV170706489 LNAP01003533 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 14913 14837 - Arg TCT [ENA] ¢þ
>WENV170708648 LNAP01100863 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 207 283 + Arg TCT [ENA] ¢þ
>WENV170710439 LNFM01001749 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 10955 11031 + Arg TCT [ENA] ¢þ
>WENV170961611 MLJW01000232 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 30749 30673 - Arg TCT [ENA] ¢þ
>WENV170961722 MLJW01000675 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 7732 7656 - Arg TCT [ENA] ¢þ
>WENV022999 AACY020690357 Marine microbial communities from Global Ocean Sampling (GOS) 133 211 + Arg TCT [ENA]
>W09101014 AADX02000005 Betaproteobacteria Methylobacillus flagellatus KT [AADX] 156517 156441 - Arg TCT [ENA] ¡û
>W141819352 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1091328 1091404 + Arg TCT [ENA] ¡û
>W1910015377 BDOQ01000003 Betaproteobacteria Novimethylophilus kurashikiensis La2-4 [BDOQ] 335497 335573 + Arg TCT [ENA] ¡û
>W1910126416 BGOW01000006 Betaproteobacteria Sulfuriferula multivorans TTN [BGOW] 77695 77619 - Arg TCT [ENA] ¡û
>W1910128282 BHGL01000002 Betaproteobacteria Sulfuriferula thiophila mst6 [BHGL] 3269 3193 - Arg TCT [ENA] ¡û
>C09107553 CP001674 Betaproteobacteria Methylovorus glucosotrophus SIP3-4 [CP001674] 90915 90991 + Arg TCT [Ensembl] ¡û
>C09107780 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 239476 239552 + Arg TCT [Ensembl] ¡û
>C141000195 AP013066 Betaproteobacteria Sulfuricella denitrificans skB26 [AP013066] 1427416 1427340 - Arg TCT [Ensembl] ¡û
>W1910547764 FZOA01000010 Betaproteobacteria Methylobacillus rhizosphaerae Ca-68 [FZOA] 10951 11027 + Arg TCT [ENA] ¡û
>W1910698918 MEQR01000049 Betaproteobacteria Betaproteobacteria bacterium RBG_19FT_COMBO_58_11 [MEQR] 13489 13413 - Arg TCT [ENA] ¡û
>W1910730012 MHBT01000090 Betaproteobacteria Methylophilales bacterium RIFCSPHIGHO2_02_FULL_57_10 [MHBT] 8877 8953 + Arg TCT [ENA] ¡û
>W1911623997 PQVH01000010 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 99276 99200 - Arg TCT [ENA] ¡û
>C151104060 LN794158 Betaproteobacteria Candidatus Methylopumilus turicensis MMS-10A-171 [LN794158] 58355 58431 + Arg TCT [Ensembl] ¡û
>ENV09000759 ABSP01031374 Freshwater sediment metagenome lwMethane_C1 497 573 + Arg TCT [ENA] ¡û
>ENV09001305 ABSR01000873 Freshwater sediment metagenome lwMethylamine_C1 1188 1112 - Arg TCT [ENA] ¡û
>ENV09001349 ABSR01002410 Freshwater sediment metagenome lwMethylamine_C1 850 926 + Arg TCT [ENA] ¡û
>ENV09001425 ABSR01006578 Freshwater sediment metagenome lwMethylamine_C1 907 831 - Arg TCT [ENA] ¡û
>ENV09001534 ABSR01025017 Freshwater sediment metagenome lwMethylamine_C1 191 267 + Arg TCT [ENA] ¡û
>W1510019319 BBWF01000017 Betaproteobacteria Sulfuricella sp. T08 [BBWF] 52339 52415 + Arg TCT [ENA] ¡û
>C11114188 CP002252 Betaproteobacteria Methylovorus sp. MP688 [CP002252] 90916 90992 + Arg TCT [Ensembl] ¡û
>W1511431981 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 2581753 2581829 + Arg TCT [ENA] ¡û
>W1511432015 JUGF01000002 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 838470 838546 + Arg TCT [ENA] ¡û
>W1511433552 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 1727661 1727585 - Arg TCT [ENA] ¡û
>W11150917 AEWG01000034 Betaproteobacteria Rubrivivax benzoatilyticus JA2 [AEWG] 21644 21568 - Arg TCT [ENA] ¡û
>WENV058116 AACY023318188 Marine microbial communities from Global Ocean Sampling (GOS) 1132 1054 - Arg TCT [ENA]
>W121060099 AJFF01000113 Betaproteobacteria Rubrivivax gelatinosus CBS [AJFF] 2195 2271 + Arg TCT [ENA] ¡û
>W121124625 BAFJ01000005 Betaproteobacteria Sulfuricella denitrificans skB26 [BAFJ] 275985 276061 + Arg TCT [ENA] ¡û
>W1610753565 LNEP01000005 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 42666 42590 - Arg TCT [ENA] ¡û
>W1611008627 LXUF01000011 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 551215 551139 - Arg TCT [ENA] ¡û
Identical group No.303515 (11 seq.)
>W131186206 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 674493 674417 - Arg TCT [ENA] ¡û
>W131186568 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 1553963 1553887 - Arg TCT [ENA] ¡û
>WENV180377229 OBON01004101 [OBON] marine metagenome; sea water 975 899 - Arg TCT [ENA] ¢þ
>WENV181379713 OFRD01006614 [OFRD] wastewater metagenome; Exp Tend CN 100WW 158 82 - Arg TCT [ENA] ¢þ
>WENV170571590 FLOH01000217 [FLOH] marine metagenome; water 111373 111449 + Arg TCT [ENA] ¢þ
>WENV170710977 LNFM01003165 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 32838 32762 - Arg TCT [ENA] ¢þ
>WENV170712574 LNFM01015131 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 9308 9232 - Arg TCT [ENA] ¢þ
>W1910730042 MHBU01000029 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 22692 22768 + Arg TCT [ENA] ¡û
>ENV09001283 ABSR01000169 Freshwater sediment metagenome lwMethylamine_C1 729 805 + Arg TCT [ENA] ¡û
>ENV09001391 ABSR01004580 Freshwater sediment metagenome lwMethylamine_C1 4234 4310 + Arg TCT [ENA] ¡û
>C10109337 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 163573 163649 + Arg TCT [Ensembl] ¡û
Identical group No.303765 (4 seq.)
>W1710807309 LKCX01000016 Betaproteobacteria Curvibacter sp. PAE-UM [LKCX] 11967 12043 + Arg TCT [ENA] ¡û
>WENV170713829 LNFM01043745 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 2218 2294 + Arg TCT [ENA] ¢þ
>ENV09001432 ABSR01007006 Freshwater sediment metagenome lwMethylamine_C1 517 441 - Arg TCT [ENA] ¡û
>W1610671413 LKCX01000016 Betaproteobacteria Curvibacter sp. PAE-UM [LKCX] 11967 12043 + Arg TCT [ENA] ¡û
Identical group No.317449 (17 seq.)
>WENV170188992 CEPB01109490 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 641 567 - Arg TCT [ENA] ¢þ
>WENV170247283 CEQQ01026971 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 427 353 - Arg TCT [ENA] ¢þ
>WENV170253561 CEQU01098920 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 459 385 - Arg TCT [ENA] ¢þ
>WENV170280093 CERR01091153 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 265 191 - Arg TCT [ENA] ¢þ
>WENV170363226 CETM01138875 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10598 10672 + Arg TCT [ENA] ¢þ
>WENV170419284 CEUM01115538 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 366 292 - Arg TCT [ENA] ¢þ
>WENV170421168 CEUN01053840 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 25067 25141 + Arg TCT [ENA] ¢þ
>WENV170494637 CEVR01110309 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 238 164 - Arg TCT [ENA] ¢þ
>WENV170519283 CEWE01222652 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11481 11407 - Arg TCT [ENA] ¢þ
>WENV170808632 MDSW01118433 [MDSW] marine metagenome; seawater 3124 3050 - Arg TCT [ENA] ¢þ
>WENV170812843 MDSW01190074 [MDSW] marine metagenome; seawater 2526 2600 + Arg TCT [ENA] ¢þ
>WENV170816998 MDSX01041775 [MDSX] marine metagenome; seawater 2590 2664 + Arg TCT [ENA] ¢þ
>WENV170844677 MDTA01010446 [MDTA] marine metagenome; seawater 4108 4182 + Arg TCT [ENA] ¢þ
>WENV170891599 MDTD01026281 [MDTD] marine metagenome; seawater 79 5 - Arg TCT [ENA] ¢þ
>WENV170898759 MDTD01130762 [MDTD] marine metagenome; seawater 21 95 + Arg TCT [ENA] ¢þ
>WENV170902804 MDTD01191713 [MDTD] marine metagenome; seawater 21 95 + Arg TCT [ENA] ¢þ
>ENV09001457 ABSR01010988 Freshwater sediment metagenome lwMethylamine_C1 250 176 - Arg TCT [ENA] ¡û
Identical group No.408617 (2 seq.)
>ENV09001216 ABSQ01051039 Freshwater sediment metagenome lwMethenol_C1 333 409 + Arg TCT [ENA] ¡û
>ENV09001504 ABSR01019714 Freshwater sediment metagenome lwMethylamine_C1 440 516 + Arg TCT [ENA] ¡û
Identical group No.441298 (1 seq.)
>ENV09001455 ABSR01010455 Freshwater sediment metagenome lwMethylamine_C1 297 371 + Arg TCT [ENA] ¡û
Identical group No.441304 (1 seq.)
>ENV09001522 ABSR01024205 Freshwater sediment metagenome lwMethylamine_C1 492 416 - Arg TCT [ENA] ¡û
Identical group No.441307 (1 seq.)
>ENV09001577 ABSR01032828 Freshwater sediment metagenome lwMethylamine_C1 249 325 + Arg TCT [ENA] ¡û
Identical group No.641713 (1 seq.)
>ENV09001599 ABSR01035462 Freshwater sediment metagenome lwMethylamine_C1 542 467 - Arg TCT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
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