tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = TGA

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.44765 (1 seq.)
>ENV09001523 ABSR01024206 Freshwater sediment metagenome lwMethylamine_C1 329 239 - Ser TGA [ENA] ¡û
Identical group No.45704 (20 seq.)
>W1711224648 LXUF01000001 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 1242821 1242910 + Ser TGA [ENA] ¡û
>W131164731 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 1001493 1001582 + Ser TGA [ENA] ¡û
>WENV181187841 OEOE01000231 [OEOE] activated sludge metagenome; Activated Sludge 7734 7645 - Ser TGA [ENA] ¢þ
>WENV181187842 OEOE01000231 [OEOE] activated sludge metagenome; Activated Sludge 5409 5320 - Ser TGA [ENA] ¢þ
>WENV181189033 OEOF01000008 [OEOF] activated sludge metagenome; Activated Sludge 27582 27671 + Ser TGA [ENA] ¢þ
>WENV181384264 OFRH01047775 [OFRH] wastewater metagenome; Exp Tend NO 100WW 217 306 + Ser TGA [ENA] ¢þ
>WENV181400487 OFSF01008026 [OFSF] wastewater metagenome; Exp Tend VB 100WW 814 725 - Ser TGA [ENA] ¢þ
>WENV181838173 OGVM01016391 [OGVM] freshwater metagenome; freshwater 392 481 + Ser TGA [ENA] ¢þ
>WENV181843439 OGVU01014957 [OGVU] freshwater metagenome; freshwater 650 561 - Ser TGA [ENA] ¢þ
>WENV170705501 LNAO01001121 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 2389 2300 - Ser TGA [ENA] ¢þ
>WENV170706347 LNAP01002291 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 26342 26253 - Ser TGA [ENA] ¢þ
>WENV170706525 LNAP01003914 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 13976 13887 - Ser TGA [ENA] ¢þ
>W141819367 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 2138744 2138833 + Ser TGA [ENA] ¡û
>W1911623986 PQVH01000008 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 102575 102664 + Ser TGA [ENA] ¡û
>C151104071 LN794158 Betaproteobacteria Candidatus Methylopumilus turicensis MMS-10A-171 [LN794158] 776728 776817 + Ser TGA [Ensembl] ¡û
>ENV09000949 ABSQ01001792 Freshwater sediment metagenome lwMethenol_C1 725 814 + Ser TGA [ENA] ¡û
>ENV09001290 ABSR01000603 Freshwater sediment metagenome lwMethylamine_C1 956 1045 + Ser TGA [ENA] ¡û
>ENV09001298 ABSR01000718 Freshwater sediment metagenome lwMethylamine_C1 648 559 - Ser TGA [ENA] ¡û
>W1511433563 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 513491 513402 - Ser TGA [ENA] ¡û
>W1611008612 LXUF01000001 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 1242821 1242910 + Ser TGA [ENA] ¡û
Identical group No.50028 (15 seq.)
>W131186198 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 2179968 2179879 - Ser TGA [ENA] ¡û
>W131186582 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 450666 450577 - Ser TGA [ENA] ¡û
>WENV181188533 OEOE01181078 [OEOE] activated sludge metagenome; Activated Sludge 177 266 + Ser TGA [ENA] ¢þ
>WENV181189411 OEOF01038139 [OEOF] activated sludge metagenome; Activated Sludge 213 302 + Ser TGA [ENA] ¢þ
>WENV170559191 CXWL01113685 [CXWL] groundwater metagenome; biofilm material 2354 2265 - Ser TGA [ENA] ¢þ
>WENV170577614 FSSH01000274 [FSSH] freshwater metagenome; drinking water 42460 42371 - Ser TGA [ENA] ¢þ
>WENV170710209 LNFM01001301 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 18231 18320 + Ser TGA [ENA] ¢þ
>WENV170712551 LNFM01014732 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 91 2 - Ser TGA [ENA] ¢þ
>WENV170712659 LNFM01016107 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 8741 8830 + Ser TGA [ENA] ¢þ
>W1910730038 MHBU01000028 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 5274 5185 - Ser TGA [ENA] ¡û
>ENV09001359 ABSR01002924 Freshwater sediment metagenome lwMethylamine_C1 1567 1478 - Ser TGA [ENA] ¡û
>C10109372 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 1541470 1541381 - Ser TGA [Ensembl] ¡û
>W1511432005 JUGF01000001 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 522102 522191 + Ser TGA [ENA] ¡û
>WENV058034 AACY023315194 Marine microbial communities from Global Ocean Sampling (GOS) 904 815 - Ser TGA [ENA]
>WENV058809 AACY023342460 Marine microbial communities from Global Ocean Sampling (GOS) 1436 1525 + Ser TGA [ENA]
Identical group No.65623 (2 seq.)
>ENV09001088 ABSQ01030761 Freshwater sediment metagenome lwMethenol_C1 388 477 + Ser TGA [ENA] ¡û
>ENV09001593 ABSR01034012 Freshwater sediment metagenome lwMethylamine_C1 378 465 + Ser TGA [ENA] ¡û
Identical group No.86008 (1 seq.)
>ENV09001543 ABSR01027042 Freshwater sediment metagenome lwMethylamine_C1 483 395 - Ser TGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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