This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Freshwater sediment metagenome lwMethylamine_C1
Anticodon = TGT
HIT:
6 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.455356 (61 seq.)
>W1711223918
LXTQ01000020
Betaproteobacteria
Methylobacillus sp. MM3 MM2 [LXTQ]
294312
294387
+
Thr
TGT
[ENA]
¡û
>W1711224665
LXUF01000011
Betaproteobacteria
Methylovorus sp. MM2 MM1 [LXUF]
394688
394613
-
Thr
TGT
[ENA]
¡û
>W1711339983
MCAW01000002
Betaproteobacteria
Methylophilales bacterium LSUCC0135 [MCAW]
872
797
-
Thr
TGT
[ENA]
¡û
>W131186209
ARVX01000001
Betaproteobacteria
Methylotenera versatilis 79 [ARVX]
508550
508475
-
Thr
TGT
[ENA]
¡û
>W131186571
ARWF01000001
Betaproteobacteria
Methylotenera sp. 73s [ARWF]
1388025
1387950
-
Thr
TGT
[ENA]
¡û
>C013374
CP000284
Betaproteobacteria
Methylobacillus flagellatus KT [CP000284]
269603
269678
+
Thr
TGT
[Ensembl]
¡û
>WENV180110969
OAPN01018187
[OAPN] marine metagenome; 2011
551
476
-
Thr
TGT
[ENA]
¢þ
>WENV181187992
OEOE01009820
[OEOE] activated sludge metagenome; Activated Sludge
277
202
-
Thr
TGT
[ENA]
¢þ
>WENV181189069
OEOF01000207
[OEOF] activated sludge metagenome; Activated Sludge
9835
9910
+
Thr
TGT
[ENA]
¢þ
>WENV181368863
OFQN01002171
[OFQN] freshwater metagenome; Freshwater Lake
922
997
+
Thr
TGT
[ENA]
¢þ
>WENV181369620
OFQP01012984
[OFQP] freshwater metagenome; Freshwater Lake
455
380
-
Thr
TGT
[ENA]
¢þ
>WENV181377303
OFRA01006710
[OFRA] wastewater metagenome; Lake Maggiore Verbania
1710
1785
+
Thr
TGT
[ENA]
¢þ
>WENV181379603
OFRD01003940
[OFRD] wastewater metagenome; Exp Tend CN 100WW
798
873
+
Thr
TGT
[ENA]
¢þ
>WENV181399928
OFSF01000325
[OFSF] wastewater metagenome; Exp Tend VB 100WW
1857
1932
+
Thr
TGT
[ENA]
¢þ
>WENV181835648
OGVI01007666
[OGVI] freshwater metagenome; freshwater
225
300
+
Thr
TGT
[ENA]
¢þ
>WENV181836425
OGVJ01006729
[OGVJ] freshwater metagenome; freshwater
1164
1239
+
Thr
TGT
[ENA]
¢þ
>WENV181841618
OGVS01001779
[OGVS] freshwater metagenome; freshwater
1258
1183
-
Thr
TGT
[ENA]
¢þ
>WENV181843398
OGVU01012211
[OGVU] freshwater metagenome; freshwater
45
120
+
Thr
TGT
[ENA]
¢þ
>WENV181843425
OGVU01014240
[OGVU] freshwater metagenome; freshwater
96
171
+
Thr
TGT
[ENA]
¢þ
>WENV181843597
OGVU01033066
[OGVU] freshwater metagenome; freshwater
408
483
+
Thr
TGT
[ENA]
¢þ
>W141229544
BAMT01000006
Betaproteobacteria
Methylobacillus glycogenes JCM 2850 [BAMT]
189607
189682
+
Thr
TGT
[ENA]
¡û
>WENV183726675
PJTO01000064
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
163820
163895
+
Thr
TGT
[ENA]
¢þ
>WENV183736828
PJUD01000046
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
618
543
-
Thr
TGT
[ENA]
¢þ
>WENV183739277
PJUE01005794
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
1759
1834
+
Thr
TGT
[ENA]
¢þ
>WENV183740614
PJUF01004516
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
1213
1288
+
Thr
TGT
[ENA]
¢þ
>WENV170000148
AERA01017287
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
14
89
+
Thr
TGT
[ENA]
¢þ
>WENV170559044
CXWL01107736
[CXWL] groundwater metagenome; biofilm material
11076
11151
+
Thr
TGT
[ENA]
¢þ
>WENV170602791
FUWD010263900
[FUWD] metagenome; unknown
448
523
+
Thr
TGT
[ENA]
¢þ
>WENV170654535
JRYL01000222
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
195422
195497
+
Thr
TGT
[ENA]
¢þ
>WENV170654801
JRYL01023830
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
2509
2584
+
Thr
TGT
[ENA]
¢þ
>WENV170705834
LNAP01000436
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
27627
27552
-
Thr
TGT
[ENA]
¢þ
>WENV170705925
LNAP01000645
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
23258
23183
-
Thr
TGT
[ENA]
¢þ
>WENV170708461
LNAP01084187
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
779
704
-
Thr
TGT
[ENA]
¢þ
>WENV170708752
LNAQ01000549
[LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
8953
8878
-
Thr
TGT
[ENA]
¢þ
>WENV170708772
LNAQ01000945
[LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
2506
2431
-
Thr
TGT
[ENA]
¢þ
>WENV170708814
LNAQ01001462
[LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
511
436
-
Thr
TGT
[ENA]
¢þ
>WENV170961318
MLJW01000004
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
152082
152007
-
Thr
TGT
[ENA]
¢þ
>WENV170961456
MLJW01000054
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
42125
42050
-
Thr
TGT
[ENA]
¢þ
>W09101036
AADX02000024
Betaproteobacteria
Methylobacillus flagellatus KT [AADX]
13502
13427
-
Thr
TGT
[ENA]
¡û
>W1910547745
FZOA01000004
Betaproteobacteria
Methylobacillus rhizosphaerae Ca-68 [FZOA]
1682
1607
-
Thr
TGT
[ENA]
¡û
>W1910730028
MHBU01000022
Betaproteobacteria
Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU]
119905
119980
+
Thr
TGT
[ENA]
¡û
>C151104234
LN827929
Betaproteobacteria
Candidatus Methylopumilus planktonicus MMS-10A-171 [LN827929]
183156
183231
+
Thr
TGT
[Ensembl]
¡û
>ENV09000086
ABSN01006905
Freshwater sediment metagenome lwFormaldehyde_C1
354
279
-
Thr
TGT
[ENA]
¡û
>ENV09000119
ABSN01014228
Freshwater sediment metagenome lwFormaldehyde_C1
369
294
-
Thr
TGT
[ENA]
¡û
>ENV09000763
ABSP01031748
Freshwater sediment metagenome lwMethane_C1
627
702
+
Thr
TGT
[ENA]
¡û
>ENV09001042
ABSQ01021434
Freshwater sediment metagenome lwMethenol_C1
588
513
-
Thr
TGT
[ENA]
¡û
>ENV09001440
ABSR01008649
Freshwater sediment metagenome lwMethylamine_C1
202
127
-
Thr
TGT
[ENA]
¡û
>ENV09001470
ABSR01013362
Freshwater sediment metagenome lwMethylamine_C1
585
510
-
Thr
TGT
[ENA]
¡û
>C10109339
CP002056
Betaproteobacteria
Methylotenera versatilis 301 [CP002056]
357226
357301
+
Thr
TGT
[Ensembl]
¡û
>C10109360
CP002056
Betaproteobacteria
Methylotenera versatilis 301 [CP002056]
2956225
2956150
-
Thr
TGT
[Ensembl]
¡û
>WENV11100506
AERA01017287
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
14
89
+
Thr
TGT
[ENA]
¡û
>W1511432018
JUGF01000002
Betaproteobacteria
Methylotenera versatilis 7 [JUGF]
1010489
1010564
+
Thr
TGT
[ENA]
¡û
>W1511433535
JUHH01000001
Betaproteobacteria
Methylotenera sp. G11 [JUHH]
1963292
1963367
+
Thr
TGT
[ENA]
¡û
>W1511433536
JUHH01000001
Betaproteobacteria
Methylotenera sp. G11 [JUHH]
2157709
2157784
+
Thr
TGT
[ENA]
¡û
>WENV047215
AACY022647211
Marine microbial communities from Global Ocean Sampling (GOS)
538
613
+
Thr
TGT
[ENA]
>WENV058925
AACY023347323
Marine microbial communities from Global Ocean Sampling (GOS)
578
653
+
Thr
TGT
[ENA]
>WENV006639
AACY020177457
Marine microbial communities from Global Ocean Sampling (GOS)
545
470
-
Thr
TGT
[ENA]
>WENV006795
AACY020179772
Marine microbial communities from Global Ocean Sampling (GOS)
78
153
+
Thr
TGT
[ENA]
>WENV074553
AACY023982648
Marine microbial communities from Global Ocean Sampling (GOS)
843
768
-
Thr
TGT
[ENA]
>W1611008289
LXTQ01000020
Betaproteobacteria
Methylobacillus sp. MM3 MM2 [LXTQ]
294312
294387
+
Thr
TGT
[ENA]
¡û
>W1611008629
LXUF01000011
Betaproteobacteria
Methylovorus sp. MM2 MM1 [LXUF]
394688
394613
-
Thr
TGT
[ENA]
¡û
Identical group No.457108 (36 seq.)
>W1710878080
LMQQ01000002
Betaproteobacteria
Methylophilus sp. Leaf414 [LMQQ]
527058
527133
+
Thr
TGT
[ENA]
¡û
>W1710878171
LMQS01000004
Betaproteobacteria
Methylophilus sp. Leaf416 [LMQS]
701
626
-
Thr
TGT
[ENA]
¡û
>W1710878388
LMQX01000003
Betaproteobacteria
Methylophilus sp. Leaf459 [LMQX]
1174
1099
-
Thr
TGT
[ENA]
¡û
>W1710893303
LNEP01000006
Betaproteobacteria
Betaproteobacteria bacterium Ga0077540 [LNEP]
787
712
-
Thr
TGT
[ENA]
¡û
>W131163867
ARAC01000001
Betaproteobacteria
Methylophilus sp. 42 [ARAC]
560758
560833
+
Thr
TGT
[ENA]
¡û
>W131164751
ARBA01000003
Betaproteobacteria
Methylotenera mobilis 13 [ARBA]
539818
539743
-
Thr
TGT
[ENA]
¡û
>W131170267
ARFK01000003
Betaproteobacteria
Methylophilus sp. 1 [ARFK]
1536815
1536890
+
Thr
TGT
[ENA]
¡û
>W131176229
ARJW01000012
Betaproteobacteria
Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW]
1759
1684
-
Thr
TGT
[ENA]
¡û
>W131186397
ARWC01000001
Betaproteobacteria
Methylotenera sp. 1P/1 [ARWC]
2268909
2268984
+
Thr
TGT
[ENA]
¡û
>WENV180039326
LLBY010052075
[LLBY] soil metagenome; soil from tomato rhizosphere
504
429
-
Thr
TGT
[ENA]
¢þ
>WENV181187878
OEOE01001021
[OEOE] activated sludge metagenome; Activated Sludge
767
692
-
Thr
TGT
[ENA]
¢þ
>WENV181189111
OEOF01000834
[OEOF] activated sludge metagenome; Activated Sludge
3391
3466
+
Thr
TGT
[ENA]
¢þ
>WENV181222622
OFDC01000032
[OFDC] hot springs metagenome; Water
741
666
-
Thr
TGT
[ENA]
¢þ
>WENV181222881
OFDC01000493
[OFDC] hot springs metagenome; Water
627
552
-
Thr
TGT
[ENA]
¢þ
>WENV181226731
OFDN01000027
[OFDN] hot springs metagenome; Water
722
647
-
Thr
TGT
[ENA]
¢þ
>WENV181413736
OGCK01126187
[OGCK] hot springs metagenome; hot spring sediment
611
536
-
Thr
TGT
[ENA]
¢þ
>W141231913
BAUS01000004
Betaproteobacteria
Methylophilus sp. OH31 [BAUS]
521500
521575
+
Thr
TGT
[ENA]
¡û
>W141350138
JCKJ01000001
Betaproteobacteria
Methylophilaceae bacterium 11 [JCKJ]
349171
349246
+
Thr
TGT
[ENA]
¡û
>WENV170577508
FSSH01000094
[FSSH] freshwater metagenome; drinking water
205833
205908
+
Thr
TGT
[ENA]
¢þ
>WENV170709204
LNFM01000180
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
782
707
-
Thr
TGT
[ENA]
¢þ
>WENV170710722
LNFM01002471
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
57942
58014
+
Thr
TGT
[ENA]
¢þ
>W141819354
JQMG01000001
Betaproteobacteria
Methylotenera sp. L2L1 [JQMG]
1224939
1225014
+
Thr
TGT
[ENA]
¡û
>C09107782
CP001672
Betaproteobacteria
Methylotenera mobilis JLW8 [CP001672]
356615
356690
+
Thr
TGT
[Ensembl]
¡û
>W1911623999
PQVH01000010
Betaproteobacteria
Methylotenera oryzisoli La3113 [PQVH]
660
585
-
Thr
TGT
[ENA]
¡û
>SRA1003834
SRR002327.219067
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
195
270
+
Thr
TGT
[SRA]
>C151089440
CP012020
Betaproteobacteria
Methylophilus sp. TWE2 [CP012020]
533664
533739
+
Thr
TGT
[Ensembl]
¡û
>ENV09001300
ABSR01000793
Freshwater sediment metagenome lwMethylamine_C1
3233
3158
-
Thr
TGT
[ENA]
¡û
>ENV09001317
ABSR01001339
Freshwater sediment metagenome lwMethylamine_C1
2574
2649
+
Thr
TGT
[ENA]
¡û
>ENV09001397
ABSR01004748
Freshwater sediment metagenome lwMethylamine_C1
339
264
-
Thr
TGT
[ENA]
¡û
>W1511431963
JUGE01000001
Betaproteobacteria
Methylotenera sp. N17 [JUGE]
48893
48968
+
Thr
TGT
[ENA]
¡û
>W1511433414
JUHE01000001
Betaproteobacteria
Methylophilus sp. Q8 [JUHE]
626618
626543
-
Thr
TGT
[ENA]
¡û
>W1610740426
LMQQ01000002
Betaproteobacteria
Methylophilus sp. Leaf414 [LMQQ]
527058
527133
+
Thr
TGT
[ENA]
¡û
>W1610740517
LMQS01000004
Betaproteobacteria
Methylophilus sp. Leaf416 [LMQS]
701
626
-
Thr
TGT
[ENA]
¡û
>W1610740734
LMQX01000003
Betaproteobacteria
Methylophilus sp. Leaf459 [LMQX]
1174
1099
-
Thr
TGT
[ENA]
¡û
>W1610753569
LNEP01000006
Betaproteobacteria
Betaproteobacteria bacterium Ga0077540 [LNEP]
787
712
-
Thr
TGT
[ENA]
¡û
>W1710520795
FNFX01000004
Betaproteobacteria
Methylophilus rhizosphaerae [FNFX]
1713
1638
-
Thr
TGT
[ENA]
¡û
Identical group No.586957 (2 seq.)
>ENV09000522
ABSO01013322
Freshwater sediment metagenome lwFormate_C1
321
394
+
Thr
TGT
[ENA]
¡û
>ENV09001447
ABSR01010044
Freshwater sediment metagenome lwMethylamine_C1
590
518
-
Thr
TGT
[ENA]
¡û
Identical group No.609728 (2 seq.)
>WENV183672568
ORJL011183445
[ORJL] groundwater metagenome; groundwater
133
208
+
Thr
TGT
[ENA]
¢þ
>ENV09001567
ABSR01030764
Freshwater sediment metagenome lwMethylamine_C1
601
676
+
Thr
TGT
[ENA]
¡û
Identical group No.641703 (1 seq.)
>ENV09001496
ABSR01018835
Freshwater sediment metagenome lwMethylamine_C1
124
49
-
Thr
TGT
[ENA]
¡û
Identical group No.671914 (65 seq.)
>W1711129193
LUTU01000008
Alphaproteobacteria
Gluconobacter cerinus [LUTU]
279369
279295
-
Thr
TGT
[ENA]
¡û
>C171033031
CP014689
Alphaproteobacteria
Gluconobacter albidus TMW2.1191 [CP014689]
2345983
2346057
+
Thr
TGT
-
¡û
>C171074551
CP018190
Alphaproteobacteria
Granulibacter bethesdensis NIH5.1 [CP018190]
1850177
1850251
+
Thr
TGT
-
¡û
>C171074603
CP018191
Alphaproteobacteria
Granulibacter bethesdensis NIH9.1 [CP018191]
1849032
1849106
+
Thr
TGT
-
¡û
>C171074655
CP018192
Alphaproteobacteria
Granulibacter bethesdensis NIH6.1 [CP018192]
1858248
1858322
+
Thr
TGT
-
¡û
>C171074707
CP018193
Alphaproteobacteria
Granulibacter bethesdensis NIH7.1 [CP018193]
1869221
1869295
+
Thr
TGT
-
¡û
>C171074759
CP018194
Alphaproteobacteria
Granulibacter bethesdensis NIH8.1 [CP018194]
1849033
1849107
+
Thr
TGT
-
¡û
>C171074811
CP018195
Alphaproteobacteria
Granulibacter bethesdensis NIH1.4 [CP018195]
1849670
1849744
+
Thr
TGT
-
¡û
>W131043733
AMPS01000012
Alphaproteobacteria
Acidocella sp. MX-AZ02 [AMPS]
6700
6626
-
Thr
TGT
[ENA]
¡û
>W131222500
AUBI01000001
Alphaproteobacteria
Acetobacter nitrogenifigens DSM 23921 [AUBI]
601229
601303
+
Thr
TGT
[ENA]
¡û
>C009833
CP000394
Alphaproteobacteria
Granulibacter bethesdensis CGDNIH1 [CP000394]
1849609
1849683
+
Thr
TGT
[Ensembl]
¡û
>C015225
CP000127
Gammaproteobacteria
Nitrosococcus oceani ATCC 19707 [CP000127]
208097
208171
+
Thr
TGT
[Ensembl]
¡û
>WENV180250714
OBEQ010306562
[OBEQ] groundwater metagenome; groundwater
807
733
-
Thr
TGT
[ENA]
¢þ
>WENV180260468
OBEQ011203479
[OBEQ] groundwater metagenome; groundwater
599
673
+
Thr
TGT
[ENA]
¢þ
>WENV180265840
OBEQ011696928
[OBEQ] groundwater metagenome; groundwater
261
335
+
Thr
TGT
[ENA]
¢þ
>WENV180304492
OBJI01084266
[OBJI] soil metagenome; soil
97
23
-
Thr
TGT
[ENA]
¢þ
>WENV180369507
OBOG01142813
[OBOG] marine metagenome; seawater
273
199
-
Thr
TGT
[ENA]
¢þ
>WENV180371900
OBOI01018236
[OBOI] sediment metagenome; sediment
491
565
+
Thr
TGT
[ENA]
¢þ
>WENV180590823
OCOU01015850
[OCOU] marine metagenome; Water
241
315
+
Thr
TGT
[ENA]
¢þ
>W08011098
ABSG01000032
Gammaproteobacteria
Nitrosococcus oceani C-27 [ABSG]
45813
45887
+
Thr
TGT
[ENA]
¡û
>W141200346
AYXS01000011
Alphaproteobacteria
Asaia sp. SF2.1 [AYXS]
50877
50951
+
Thr
TGT
[ENA]
¡û
>W141226065
BAJT01000004
Alphaproteobacteria
Asaia astilbis JCM 15831 [BAJT]
31132
31058
-
Thr
TGT
[ENA]
¡û
>W141226170
BAJV01000012
Alphaproteobacteria
Asaia prunellae JCM 25354 [BAJV]
52663
52589
-
Thr
TGT
[ENA]
¡û
>W141227261
BAKW01000005
Alphaproteobacteria
Asaia platycodi JCM 25414 [BAKW]
17237
17163
-
Thr
TGT
[ENA]
¡û
>W141247952
CBLX010000023
Alphaproteobacteria
Asaia bogorensis SF2.1 [CBLX]
601
527
-
Thr
TGT
[ENA]
¡û
>WENV183662717
ORJL010218753
[ORJL] groundwater metagenome; groundwater
82
8
-
Thr
TGT
[ENA]
¢þ
>WENV183664703
ORJL010400892
[ORJL] groundwater metagenome; groundwater
19018
18944
-
Thr
TGT
[ENA]
¢þ
>WENV183666502
ORJL010557456
[ORJL] groundwater metagenome; groundwater
3400
3326
-
Thr
TGT
[ENA]
¢þ
>WENV183676846
ORJL011676128
[ORJL] groundwater metagenome; groundwater
305
379
+
Thr
TGT
[ENA]
¢þ
>WENV183685917
ORMF010921978
[ORMF] groundwater metagenome; groundwater
367
293
-
Thr
TGT
[ENA]
¢þ
>WENV170557029
CXWL01017607
[CXWL] groundwater metagenome; biofilm material
155
81
-
Thr
TGT
[ENA]
¢þ
>WENV170662343
JXWW01044199
[JXWW] soil metagenome; rice field; organic GM Plot
286
212
-
Thr
TGT
[ENA]
¢þ
>WENV170668179
LADL02001634
[LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole
10325
10399
+
Thr
TGT
[ENA]
¢þ
>WENV170712944
LNFM01020960
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
219
293
+
Thr
TGT
[ENA]
¢þ
>WENV170713082
LNFM01023511
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
1083
1157
+
Thr
TGT
[ENA]
¢þ
>WENV170713352
LNFM01029170
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
664
590
-
Thr
TGT
[ENA]
¢þ
>C191090670
CP032485
Alphaproteobacteria
Neokomagataea tanensis AH13 [CP032485]
1201579
1201505
-
Thr
TGT
-
¡û
>C191157627
CP038033
Gammaproteobacteria
Nitrosococcus wardiae D1FHS [CP038033]
2142844
2142917
+
Thr
TGT
-
¡û
>C191157823
CP038141
Alphaproteobacteria
Swingsia samuiensis AH83 [CP038141]
1338250
1338176
-
Thr
TGT
-
¡û
>W141561214
JHYG01000013
Alphaproteobacteria
Acidocella facilis ATCC 35904 [JHYG]
54054
53980
-
Thr
TGT
[ENA]
¡û
>W141731644
JNJH01000034
Alphaproteobacteria
Acidiphilium angustum ATCC 35903 [JNJH]
8365
8439
+
Thr
TGT
[ENA]
¡û
>W141802300
JPFN01000008
Gammaproteobacteria
Nitrosococcus oceani [JPFN]
40818
40892
+
Thr
TGT
[ENA]
¡û
>W141803295
JPGN01000006
Gammaproteobacteria
Nitrosococcus oceani C-27 [JPGN]
23018
23092
+
Thr
TGT
[ENA]
¡û
>W1910181875
BJMK01000011
Alphaproteobacteria
Gluconobacter sphaericus NBRC 12467 [BJMK]
39291
39365
+
Thr
TGT
[ENA]
¡û
>W1911597811
PNQZ01000001
Alphaproteobacteria
Asaia sp. W19 [PNQZ]
164223
164297
+
Thr
TGT
[ENA]
¡û
>W1810000629
BEWL01000014
Alphaproteobacteria
Gluconobacter albidus NBRC 3250 [BEWL]
16733
16659
-
Thr
TGT
[ENA]
¡û
>W1810000650
BEWM01000002
Alphaproteobacteria
Gluconobacter cerinus NBRC 3267 [BEWM]
630135
630061
-
Thr
TGT
[ENA]
¡û
>C151004023
CP003181
Alphaproteobacteria
Granulibacter bethesdensis NIH3.1 [CP003181]
1883716
1883790
+
Thr
TGT
[Ensembl]
¡û
>C151004098
CP003182
Alphaproteobacteria
Granulibacter bethesdensis CGDNIH4 [CP003182]
1559906
1559832
-
Thr
TGT
[Ensembl]
¡û
>C151004150
CP003183
Alphaproteobacteria
Granulibacter bethesdensis NIH2.1 [CP003183]
1572427
1572353
-
Thr
TGT
[Ensembl]
¡û
>ENV09001539
ABSR01025632
Freshwater sediment metagenome lwMethylamine_C1
656
730
+
Thr
TGT
[ENA]
¡û
>C10109777
CP001798
Gammaproteobacteria
Nitrosococcus halophilus Nc 4 [CP001798]
2720043
2720117
+
Thr
TGT
[Ensembl]
¡û
>C10109910
CP002086
Gammaproteobacteria
Nitrosococcus watsonii C-113 [CP002086]
197291
197365
+
Thr
TGT
[Ensembl]
¡û
>W1511620432
LCTG01000002
Alphaproteobacteria
Gluconobacter oxydans NL71 [LCTG]
1201137
1201063
-
Thr
TGT
[ENA]
¡û
>C161001063
AP014690
Alphaproteobacteria
Asaia bogorensis NBRC 16594 [AP014690]
43325
43399
+
Thr
TGT
[Ensembl]
¡û
>C161085641
CP015249
Gammaproteobacteria
Dokdonella koreensis DS-123 [CP015249]
3951763
3951834
+
Thr
TGT
[Ensembl]
¡û
>W1610076847
BCZB01000009
Alphaproteobacteria
Neokomagataea thailandica NBRC 106555 [BCZB]
39168
39242
+
Thr
TGT
[ENA]
¡û
>W1610624573
LHZN01000113
Alphaproteobacteria
Gluconobacter albidus [LHZN]
18397
18471
+
Thr
TGT
[ENA]
¡û
>W1610940266
LUTU01000008
Alphaproteobacteria
Gluconobacter cerinus [LUTU]
279369
279295
-
Thr
TGT
[ENA]
¡û
>W1710074536
BCZB01000009
Alphaproteobacteria
Neokomagataea thailandica NBRC 106555 [BCZB]
39168
39242
+
Thr
TGT
[ENA]
¡û
>W1710597380
FTNE01000002
Alphaproteobacteria
Acidiphilium rubrum [FTNE]
35520
35446
-
Thr
TGT
[ENA]
¡û
>W1710624741
JOPF01000014
Alphaproteobacteria
Gluconobacter sp. DsW_056 [JOPF]
16759
16685
-
Thr
TGT
[ENA]
¡û
>W1710624797
JOPH01000005
Alphaproteobacteria
Gluconobacter sp. DsW_058 [JOPH]
49424
49498
+
Thr
TGT
[ENA]
¡û
>W1710624972
JOPL01000151
Alphaproteobacteria
Acetobacter sp. DsW_063 [JOPL]
1840
1766
-
Thr
TGT
[ENA]
¡û
>W1710755691
LHZN01000113
Alphaproteobacteria
Gluconobacter albidus [LHZN]
18397
18471
+
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK