tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = TTC

HIT: 2 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.451815 (64 seq.)
>W1710878062 LMQQ01000001 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 36836 36911 + Glu TTC [ENA] ¡û
>W1710878144 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 36781 36856 + Glu TTC [ENA] ¡û
>W1710878371 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 36186 36261 + Glu TTC [ENA] ¡û
>W1711224650 LXUF01000001 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 1317136 1317211 + Glu TTC [ENA] ¡û
>W1711339976 MCAW01000001 Betaproteobacteria Methylophilales bacterium LSUCC0135 [MCAW] 327920 327995 + Glu TTC [ENA] ¡û
>W1711386565 MEFO01000012 Gammaproteobacteria Xanthomonadaceae bacterium SCN 69-123 [MEFO] 4116 4041 - Glu TTC [ENA] ¡û
>W131163883 ARAC01000001 Betaproteobacteria Methylophilus sp. 42 [ARAC] 1534653 1534728 + Glu TTC [ENA] ¡û
>W131164733 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 1200735 1200810 + Glu TTC [ENA] ¡û
>W131164734 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 1200901 1200976 + Glu TTC [ENA] ¡û
>W131170290 ARFK01000004 Betaproteobacteria Methylophilus sp. 1 [ARFK] 955551 955626 + Glu TTC [ENA] ¡û
>W131176242 ARJW01000015 Betaproteobacteria Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW] 136688 136613 - Glu TTC [ENA] ¡û
>W131186200 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 2128639 2128564 - Glu TTC [ENA] ¡û
>W131186421 ARWC01000001 Betaproteobacteria Methylotenera sp. 1P/1 [ARWC] 487099 487024 - Glu TTC [ENA] ¡û
>W131186584 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 399337 399262 - Glu TTC [ENA] ¡û
>W131222270 AUBD01000001 Gammaproteobacteria Silanimonas lenta DSM 16282 [AUBD] 177839 177764 - Glu TTC [ENA] ¡û
>WENV181189029 OEOE01605689 [OEOE] activated sludge metagenome; Activated Sludge 77 2 - Glu TTC [ENA] ¢þ
>WENV181189053 OEOF01000046 [OEOF] activated sludge metagenome; Activated Sludge 18661 18736 + Glu TTC [ENA] ¢þ
>WENV181189429 OEOF01043200 [OEOF] activated sludge metagenome; Activated Sludge 8 83 + Glu TTC [ENA] ¢þ
>WENV181190220 OEOF01614355 [OEOF] activated sludge metagenome; Activated Sludge 77 2 - Glu TTC [ENA] ¢þ
>WENV181222568 OFDC01000010 [OFDC] hot springs metagenome; Water 123 198 + Glu TTC [ENA] ¢þ
>WENV181226781 OFDN01000058 [OFDN] hot springs metagenome; Water 119630 119555 - Glu TTC [ENA] ¢þ
>W141220064 AZXN01000001 Betaproteobacteria Methylophilus sp. 5 [AZXN] 2676025 2676100 + Glu TTC [ENA] ¡û
>W141231904 BAUS01000002 Betaproteobacteria Methylophilus sp. OH31 [BAUS] 956504 956579 + Glu TTC [ENA] ¡û
>W141350166 JCKJ01000001 Betaproteobacteria Methylophilaceae bacterium 11 [JCKJ] 1352794 1352719 - Glu TTC [ENA] ¡û
>WENV170018655 BBPD01000268 [BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 5631 5706 + Glu TTC [ENA] ¢þ
>WENV170019731 BBPE01000345 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 19892 19817 - Glu TTC [ENA] ¢þ
>WENV170558827 CXWL01093882 [CXWL] groundwater metagenome; biofilm material 3020 2945 - Glu TTC [ENA] ¢þ
>WENV170577515 FSSH01000106 [FSSH] freshwater metagenome; drinking water 12054 12129 + Glu TTC [ENA] ¢þ
>WENV170705800 LNAP01000352 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 56227 56302 + Glu TTC [ENA] ¢þ
>WENV170705801 LNAP01000352 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 59761 59836 + Glu TTC [ENA] ¢þ
>WENV170706316 LNAP01002010 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 2275 2350 + Glu TTC [ENA] ¢þ
>WENV170706602 LNAP01004549 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 7693 7768 + Glu TTC [ENA] ¢þ
>WENV170708771 LNAQ01000873 [LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 5327 5252 - Glu TTC [ENA] ¢þ
>WENV170708856 LNFM01000007 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 498607 498532 - Glu TTC [ENA] ¢þ
>WENV170711533 LNFM01005713 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 11674 11749 + Glu TTC [ENA] ¢þ
>WENV170712278 LNFM01011740 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 3050 2975 - Glu TTC [ENA] ¢þ
>WENV170713358 LNFM01029374 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1915 1840 - Glu TTC [ENA] ¢þ
>WENV170961317 MLJW01000004 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 107913 107988 + Glu TTC [ENA] ¢þ
>W141819369 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 2214163 2214238 + Glu TTC [ENA] ¡û
>W141819370 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 2214333 2214408 + Glu TTC [ENA] ¡û
>C09107589 CP001674 Betaproteobacteria Methylovorus glucosotrophus SIP3-4 [CP001674] 1426886 1426811 - Glu TTC [Ensembl] ¡û
>C09107814 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 1182171 1182096 - Glu TTC [Ensembl] ¡û
>C09107815 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 1182036 1181961 - Glu TTC [Ensembl] ¡û
>W1911623988 PQVH01000008 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 226453 226528 + Glu TTC [ENA] ¡û
>W1911623989 PQVH01000008 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 226596 226671 + Glu TTC [ENA] ¡û
>C151089455 CP012020 Betaproteobacteria Methylophilus sp. TWE2 [CP012020] 1567448 1567523 + Glu TTC [Ensembl] ¡û
>C151104074 LN794158 Betaproteobacteria Candidatus Methylopumilus turicensis MMS-10A-171 [LN794158] 874479 874554 + Glu TTC [Ensembl] ¡û
>ENV09001287 ABSR01000513 Freshwater sediment metagenome lwMethylamine_C1 3694 3619 - Glu TTC [ENA] ¡û
>ENV09001288 ABSR01000513 Freshwater sediment metagenome lwMethylamine_C1 3550 3475 - Glu TTC [ENA] ¡û
>ENV09001347 ABSR01002395 Freshwater sediment metagenome lwMethylamine_C1 898 823 - Glu TTC [ENA] ¡û
>C10109352 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 1538064 1538139 + Glu TTC [Ensembl] ¡û
>C11114222 CP002252 Betaproteobacteria Methylovorus sp. MP688 [CP002252] 1434482 1434407 - Glu TTC [Ensembl] ¡û
>W1511431997 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 1035145 1035070 - Glu TTC [ENA] ¡û
>W1511432007 JUGF01000001 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 598200 598275 + Glu TTC [ENA] ¡û
>W1511433406 JUHE01000001 Betaproteobacteria Methylophilus sp. Q8 [JUHE] 2567997 2567922 - Glu TTC [ENA] ¡û
>W1511433565 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 445790 445715 - Glu TTC [ENA] ¡û
>W1511433566 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 445619 445544 - Glu TTC [ENA] ¡û
>W1610740408 LMQQ01000001 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 36836 36911 + Glu TTC [ENA] ¡û
>W1610740490 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 36781 36856 + Glu TTC [ENA] ¡û
>W1610740717 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 36186 36261 + Glu TTC [ENA] ¡û
>W1611008614 LXUF01000001 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 1317136 1317211 + Glu TTC [ENA] ¡û
>WENV079912 AATN01008203 Wastewater EBPR microbial communities from Bioreactor (Australian sludge) 782 859 + Glu TTC [ENA]
>W1710513575 FNAG01000001 Gammaproteobacteria Aquimonas voraii [FNAG] 913503 913428 - Glu TTC [ENA] ¡û
>W1710520781 FNFX01000002 Betaproteobacteria Methylophilus rhizosphaerae [FNFX] 33037 33112 + Glu TTC [ENA] ¡û
Identical group No.834011 (1 seq.)
>ENV09001546 ABSR01027353 Freshwater sediment metagenome lwMethylamine_C1 487 560 + Glu TTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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