tRNA genes clustered and arranged according to each identical group

Glaucocystophyceae

Anticodon = TGC

HIT: 1 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462651 (97 seq.)
>W1711335806 MBRE01000011 Cyanobacteria Oscillatoriales cyanobacterium USR001 (MBRE) 79963 79890 - Ala TGC [ENA]
>WENV180212211 OBAN01000454 [OBAN] marine metagenome; ENVO 00002150 1670 1744 + Ala TGC [ENA]
>WENV180364951 OBOB01000275 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 496 419 - Ala TGC [ENA]
>WENV180368677 OBOF01196970 [OBOF] marine metagenome; ENVO:00002010 102 26 - Ala TGC [ENA]
>WENV180373895 OBOJ01038360 [OBOJ] marine metagenome; seawater 552 626 + Ala TGC [ENA]
>W141038145 ALVI01000018 Cyanobacteria Kamptonema formosum PCC 6407 [ALVI] 52592 52519 - Ala TGC [ENA]
>WENV180585024 OCOK01000033 [OCOK] marine metagenome; ENVO:00002010 3531 3457 - Ala TGC [ENA]
>WENV180591830 OCOV01115960 [OCOV] marine metagenome; ENVO:01000301 128 203 + Ala TGC [ENA]
>WENV180689393 OCZA010859690 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 82 156 + Ala TGC [ENA]
>W141067402 ASAK01000005 Cyanobacteria Planktothrix agardhii NIVA-CYA 126/8 [ASAK] 2110449 2110374 - Ala TGC [ENA]
>WENV181306722 OFIM01001711 [OFIM] marine metagenome; seawater 372 445 + Ala TGC [ENA]
>WENV181322144 OFKP01010745 [OFKP] marine metagenome; sea ice 410 337 - Ala TGC [ENA]
>WENV181324616 OFLF01020347 [OFLF] marine metagenome; melt pond 265 192 - Ala TGC [ENA]
>WENV181325020 OFLI01001883 [OFLI] seawater metagenome; seawater 560 637 + Ala TGC [ENA]
>WENV182557437 OJDJ01039525 [OJDJ] seawater metagenome; Sea water 390 317 - Ala TGC [ENA]
>WENV183615501 OOEB01027771 [OOEB] marine metagenome; sea ice 476 403 - Ala TGC [ENA]
>WENV183618532 OOFO01005037 [OOFO] marine metagenome; seawater 43 120 + Ala TGC [ENA]
>WENV183620522 OOFS01000844 [OOFS] marine metagenome; sea ice 2125 2199 + Ala TGC [ENA]
>WENV183627504 OOGL01008213 [OOGL] marine metagenome; sea ice 497 424 - Ala TGC [ENA]
>WENV170002265 AGSF01001965 [AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes 1611 1538 - Ala TGC [ENA]
>WENV170022209 BCQK01001659 [BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama 3399 3324 - Ala TGC [ENA]
>WENV170128533 CENQ01013347 [CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 738 664 - Ala TGC [ENA]
>WENV170134421 CENU01104565 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 50 124 + Ala TGC [ENA]
>WENV170150372 CEOC01115280 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 542 468 - Ala TGC [ENA]
>WENV170187754 CEPA01247916 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 177 251 + Ala TGC [ENA]
>WENV170195662 CEPJ01203302 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 545 471 - Ala TGC [ENA]
>WENV170198692 CEPL01033540 [CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 276 350 + Ala TGC [ENA]
>WENV170403531 CEUF01094950 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 542 468 - Ala TGC [ENA]
>WENV170412213 CEUK01015455 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 148 222 + Ala TGC [ENA]
>WENV170469364 CEVF01109368 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 113 187 + Ala TGC [ENA]
>WENV170479363 CEVL01006576 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 483 559 + Ala TGC [ENA]
>WENV170519133 CEWE01207312 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 570 496 - Ala TGC [ENA]
>WENV170532353 CEWO01035106 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 295 372 + Ala TGC [ENA]
>WENV170568646 FLMP01059594 [FLMP] seawater metagenome; seawater 1008 931 - Ala TGC [ENA]
>WENV170578162 FUFK010000673 [FUFK] metagenome; unknown 171 245 + Ala TGC [ENA]
>WENV170600768 FUWD010142065 [FUWD] metagenome; unknown 207 283 + Ala TGC [ENA]
>WENV170683663 LFIK01018285 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 3460 3385 - Ala TGC [ENA]
>WENV170704152 LKMJ01023810 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 3460 3385 - Ala TGC [ENA]
>WENV170995898 MWWF01086446 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 429 354 - Ala TGC [ENA]
>CHL1810001703 FJ493497 Viridiplantae Monomastix sp. OKE-1 (FJ493497) 107735 107807 + Ala TGC [ENA]
>CHL1810001915 FJ968740 Viridiplantae Pedinomonas minor (FJ968740) 76588 76663 + Ala TGC [ENA]
>CHL1810001924 FJ968740 Viridiplantae Pedinomonas minor (FJ968740) 92151 92076 - Ala TGC [ENA]
>CHL1810012785 KJ746599 Viridiplantae Picocystis salinarum (KJ746599) 50721 50796 + Ala TGC [ENA]
>CHL1810012792 KJ746599 Viridiplantae Picocystis salinarum (KJ746599) 79409 79334 - Ala TGC [ENA]
>CHL1810012818 KJ746600 Viridiplantae Nephroselmis astigmatica (KJ746600) 84395 84468 + Ala TGC [ENA]
>CHL1810012823 KJ746600 Viridiplantae Nephroselmis astigmatica (KJ746600) 120539 120466 - Ala TGC [ENA]
>CHL1810014596 KM462861 Viridiplantae Myrmecia israeliensis (KM462861) 478 406 - Ala TGC [ENA]
>CHL1810014719 KM462867 Viridiplantae Pedinomonas tuberculata (KM462867) 93840 93915 + Ala TGC [ENA]
>CHL1810014728 KM462867 Viridiplantae Pedinomonas tuberculata (KM462867) 119474 119399 - Ala TGC [ENA]
>CHL1810014798 KM462871 Viridiplantae Lobosphaera incisa (KM462871) 1184 1259 + Ala TGC [ENA]
>CHL1810017551 KP453743 Euglenozoa Euglenaria anabaena UTEX 373 (KP453743) 86056 85981 - Ala TGC [ENA]
>CHL1810039427 KY083067 Rhodophyta Compsopogon caeruleus (KY083067) 24301 24374 + Ala TGC [ENA]
>CHL1810039453 KY083067 Rhodophyta Compsopogon caeruleus (KY083067) 3091 3018 - Ala TGC [ENA]
>CHL1899200035 KY083067 Rhodophyta Compsopogon caeruleus (KY083067) 3091 3018 - Ala TGC [ENA]
>CHL1899200036 KY083067 Rhodophyta Compsopogon caeruleus (KY083067) 24301 24374 + Ala TGC [ENA]
>C191000798 AP017991 Cyanobacteria Planktothrix agardhii NIES-204 (AP017991) 3329098 3329171 + Ala TGC -
>C191000822 AP017991 Cyanobacteria Planktothrix agardhii NIES-204 (AP017991) 1257224 1257151 - Ala TGC -
>W1910175491 BJCD01000119 Cyanobacteria Planktothrix agardhii CCAP 1459/11A (BJCD) 282 355 + Ala TGC [ENA]
>W1910194135 CZCS01000007 Cyanobacteria Planktothrix paucivesiculata PCC 9631 (CZCS) 79016 79089 + Ala TGC [ENA]
>W1910194148 CZCS01000095 Cyanobacteria Planktothrix paucivesiculata PCC 9631 (CZCS) 206 279 + Ala TGC [ENA]
>W1910194165 CZCS01000213 Cyanobacteria Planktothrix paucivesiculata PCC 9631 (CZCS) 36261 36334 + Ala TGC [ENA]
>W1910194190 CZCT02000092 Cyanobacteria Planktothrix sp. PCC 11201 (CZCT) 29608 29535 - Ala TGC [ENA]
>W1910194217 CZCT02000130 Cyanobacteria Planktothrix sp. PCC 11201 (CZCT) 161471 161398 - Ala TGC [ENA]
>W1910194220 CZCT02000150 Cyanobacteria Planktothrix sp. PCC 11201 (CZCT) 208 281 + Ala TGC [ENA]
>W1910194222 CZCU01000011 Cyanobacteria Planktothrix serta PCC 8927 (CZCU) 344 271 - Ala TGC [ENA]
>W1910194260 CZCU01000169 Cyanobacteria Planktothrix serta PCC 8927 (CZCU) 43973 43900 - Ala TGC [ENA]
>W1910194274 CZCZ01000004 Cyanobacteria Planktothrix rubescens 7821 (CZCZ) 731079 731006 - Ala TGC [ENA]
>W1910194300 CZDF01000058 Cyanobacteria Planktothrix tepida PCC 9214 (CZDF) 341 268 - Ala TGC [ENA]
>W1910194309 CZDF01000132 Cyanobacteria Planktothrix tepida PCC 9214 (CZDF) 1508461 1508388 - Ala TGC [ENA]
>CHL090103123 U30821 Glaucocystophyceae Cyanophora paradoxa 1966 2041 + Ala TGC [ENA]
>CHL090103140 U30821 Glaucocystophyceae Cyanophora paradoxa 115551 115476 - Ala TGC [ENA]
>SRA1027062 SRR035086.54586 454 Sequencing (SRP001807) 28 104 + Ala TGC [SRA]
>SRA1027789 SRR035086.192160 454 Sequencing (SRP001807) 173 249 + Ala TGC [SRA]
>SRA1028367 SRR035086.309989 454 Sequencing (SRP001807) 246 322 + Ala TGC [SRA]
>W10128251 CACA01000066 Cyanobacteria Oscillatoria sp. PCC 6506 [CACA] 2040 2113 + Ala TGC [ENA]
>W11185221 CACA01000066 Cyanobacteria Oscillatoria sp. PCC 6506 [CACA] 2040 2113 + Ala TGC [ENA]
>C131004670 CP003607 Cyanobacteria Oscillatoria acuminata PCC 6304 3800996 3801070 + Ala TGC [Ensembl]
>C131004228 CP003549 Cyanobacteria Rivularia sp. PCC 7116 8135954 8135879 - Ala TGC [Ensembl]
>C131004234 CP003549 Cyanobacteria Rivularia sp. PCC 7116 6604594 6604519 - Ala TGC [Ensembl]
>C131004236 CP003549 Cyanobacteria Rivularia sp. PCC 7116 6598066 6597991 - Ala TGC [Ensembl]
>W1611066513 MBRE01000011 Cyanobacteria Oscillatoriales cyanobacterium USR001 (MBRE) 79963 79890 - Ala TGC [ENA]
>ENV001366 AY827754 Environmental sample from ENV division of INSDC 79 156 + Ala TGC [ENA]
>ENV001367 AY827757 Environmental sample from ENV division of INSDC 79 156 + Ala TGC [ENA]
>ENV001371 AY827770 Environmental sample from ENV division of INSDC 107 184 + Ala TGC [ENA]
>ENV001373 AY827780 Environmental sample from ENV division of INSDC 284 361 + Ala TGC [ENA]
>ENV003952 DQ181748 Environmental sample from ENV division of INSDC 288 365 + Ala TGC [ENA]
>ENV004939 EF368183 Environmental sample from ENV division of INSDC 253 330 + Ala TGC [ENA]
>ENV004941 EF368184 Environmental sample from ENV division of INSDC 226 303 + Ala TGC [ENA]
>ENV004943 EF368185 Environmental sample from ENV division of INSDC 219 296 + Ala TGC [ENA]
>ENV005281 EU032366 Environmental sample from ENV division of INSDC 740 817 + Ala TGC [ENA]
>ENV005284 EU032369 Environmental sample from ENV division of INSDC 728 805 + Ala TGC [ENA]
>ENV005288 EU032373 Environmental sample from ENV division of INSDC 728 805 + Ala TGC [ENA]
>ENV005294 EU032377 Environmental sample from ENV division of INSDC 1054 1129 + Ala TGC [ENA]
>ENV005296 EU032384 Environmental sample from ENV division of INSDC 699 776 + Ala TGC [ENA]
>ENV005444 EU233398 Environmental sample from ENV division of INSDC 324 401 + Ala TGC [ENA]
>ENV005453 EU233409 Environmental sample from ENV division of INSDC 324 401 + Ala TGC [ENA]
>ENV005455 EU233411 Environmental sample from ENV division of INSDC 324 401 + Ala TGC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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