tRNA genes clustered and arranged according to each identical group

Groundwater metagenome 4000601.lucy.pga.C1

Anticodon = CAA

HIT: 2 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.118178 (10 seq.)
>W141258909 CBXX010000019 Betaproteobacteria Herbaspirillum sp. RV1423 [CBXX] 24449 24535 + Leu CAA [ENA] ¡û
>WENV170565530 FJVX01001341 [FJVX] metagenome; soil 840 754 - Leu CAA [ENA] ¢þ
>C181071840 CP022736 Betaproteobacteria Herbaspirillum sp. meg3 [CP022736] 3596098 3596184 + Leu CAA - ¡û
>W1810887523 QUQN01000003 Betaproteobacteria Herbaspirillum sp. 3R-3a1 [QUQN] 755814 755728 - Leu CAA [ENA] ¡û
>C151082367 CP011409 Betaproteobacteria Herbaspirillum hiltneri N3 [CP011409] 3804312 3804398 + Leu CAA - ¡û
>ENV09004075 ADIG01004361 Groundwater metagenome 4000601.lucy.pga.C1 117 203 + Leu CAA [ENA] ¡û
>W1511683789 LFLS01000038 Betaproteobacteria Herbaspirillum autotrophicum IAM 14942 [LFLS] 33930 33844 - Leu CAA [ENA] ¡û
>W1511683854 LFLU01000001 Betaproteobacteria Herbaspirillum rhizosphaerae UMS-37 [LFLU] 400542 400456 - Leu CAA [ENA] ¡û
>W121061949 AJHH01000004 Betaproteobacteria Herbaspirillum lusitanum P6-12 [AJHH] 227 141 - Leu CAA [ENA] ¡û
>W121086382 AKJW01000059 Betaproteobacteria Herbaspirillum sp. CF444 [AKJW] 86794 86708 - Leu CAA [ENA] ¡û
Identical group No.153991 (31 seq.)
>W1710864975 LMGH01000012 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 57294 57379 + Leu CAA [ENA] ¡û
>W1710866687 LMHR01000038 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 17039 17124 + Leu CAA [ENA] ¡û
>W1710880569 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 354084 353999 - Leu CAA [ENA] ¡û
>W1711147398 LVJP01003721 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 4347 4432 + Leu CAA [ENA] ¡û
>W1711147496 LVJR01000025 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 43171 43256 + Leu CAA [ENA] ¡û
>W1711147519 LVJS01000019 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 18220 18135 - Leu CAA [ENA] ¡û
>W1711147567 LVJT01000009 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 8081 8166 + Leu CAA [ENA] ¡û
>W1711147622 LVJU01000021 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 94937 94852 - Leu CAA [ENA] ¡û
>W1711421708 MHZQ01000657 Gammaproteobacteria Rhodanobacter sp. RIFOXYA1_FULL_67_6 [MHZQ] 1474 1559 + Leu CAA [ENA] ¡û
>W1711503677 MKTU01000080 Gammaproteobacteria Rhodanobacter sp. 67-28 [MKTU] 15947 15862 - Leu CAA [ENA] ¡û
>W1711751481 MUNU01000011 Gammaproteobacteria Rhodanobacter sp. B05 [MUNU] 63005 62920 - Leu CAA [ENA] ¡û
>W131218949 ATYD01000125 Gammaproteobacteria Rhodanobacter sp. OR444 [ATYD] 7019 7104 + Leu CAA [ENA] ¡û
>W131219028 ATYF01000001 Gammaproteobacteria Rhodanobacter sp. OR92 [ATYF] 92632 92547 - Leu CAA [ENA] ¡û
>WENV183736514 PJUC01007918 [PJUC] soil metagenome; Soil enriched on filter paper 215 130 - Leu CAA [ENA] ¢þ
>WENV170578052 FSSH01007892 [FSSH] freshwater metagenome; drinking water 1653 1568 - Leu CAA [ENA] ¢þ
>W1910821932 MWIO01000026 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 163262 163177 - Leu CAA [ENA] ¡û
>W1810071373 PEER01000009 Gammaproteobacteria Rhodanobacter sp. TND4EH1 [PEER] 406897 406812 - Leu CAA [ENA] ¡û
>W1810591915 QFWQ01000003 Gammaproteobacteria Rhodanobacter denitrificans Yn1 [QFWQ] 387606 387691 + Leu CAA [ENA] ¡û
>ENV09004044 ADIG01001060 Groundwater metagenome 4000601.lucy.pga.C1 63499 63584 + Leu CAA [ENA] ¡û
>W11180908 AGIL01000013 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [AGIL] 42209 42294 + Leu CAA [ENA] ¡û
>W121071251 AJXT01000029 Gammaproteobacteria Rhodanobacter spathiphylli B39 [AJXT] 55503 55588 + Leu CAA [ENA] ¡û
>W121071330 AJXV01000014 Gammaproteobacteria Rhodanobacter denitrificans 116-2 [AJXV] 32771 32856 + Leu CAA [ENA] ¡û
>C131003713 CP003470 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [CP003470] 2557464 2557549 + Leu CAA - ¡û
>W1610727321 LMGH01000012 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 57294 57379 + Leu CAA [ENA] ¡û
>W1610729033 LMHR01000038 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 17039 17124 + Leu CAA [ENA] ¡û
>W1610742915 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 354084 353999 - Leu CAA [ENA] ¡û
>W1610958351 LVJP01003721 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 4347 4432 + Leu CAA [ENA] ¡û
>W1610958449 LVJR01000025 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 43171 43256 + Leu CAA [ENA] ¡û
>W1610958472 LVJS01000019 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 18220 18135 - Leu CAA [ENA] ¡û
>W1610958520 LVJT01000009 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 8081 8166 + Leu CAA [ENA] ¡û
>W1610958575 LVJU01000021 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 94937 94852 - Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
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