tRNA genes clustered and arranged according to each identical group

Groundwater metagenome 4000601.lucy.pga.C1

Anticodon = CAC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.654993 (58 seq.)
>W1710864974 LMGH01000011 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 126088 126014 - Val CAC [ENA] ¡û
>W1710866723 LMHR01000088 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 25543 25469 - Val CAC [ENA] ¡û
>W1711147397 LVJP01003711 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 8475 8401 - Val CAC [ENA] ¡û
>W1711147464 LVJQ01002916 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 22220 22146 - Val CAC [ENA] ¡û
>W1711147514 LVJR01000109 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 191 117 - Val CAC [ENA] ¡û
>W1711147527 LVJS01000034 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 50366 50292 - Val CAC [ENA] ¡û
>W1711147570 LVJT01000009 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 114583 114657 + Val CAC [ENA] ¡û
>W1711147633 LVJU01000073 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 11603 11677 + Val CAC [ENA] ¡û
>W1711147694 LVJV01001536 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 4511 4585 + Val CAC [ENA] ¡û
>W1711147708 LVJV01001811 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 2610 2684 + Val CAC [ENA] ¡û
>W1711386238 MEFB01000008 Gammaproteobacteria Rhodanobacter sp. SCN 67-45 [MEFB] 17239 17165 - Val CAC [ENA] ¡û
>W1711503647 MKTU01000028 Gammaproteobacteria Rhodanobacter sp. 67-28 [MKTU] 15559 15485 - Val CAC [ENA] ¡û
>W1711751297 MUNQ01000009 Gammaproteobacteria Rhodanobacter sp. C05 [MUNQ] 48095 48169 + Val CAC [ENA] ¡û
>W1711751342 MUNR01000009 Gammaproteobacteria Rhodanobacter sp. C01 [MUNR] 328256 328330 + Val CAC [ENA] ¡û
>W1711751432 MUNT01000005 Gammaproteobacteria Rhodanobacter sp. C03 [MUNT] 103642 103716 + Val CAC [ENA] ¡û
>W1711751517 MUNV01000007 Gammaproteobacteria Rhodanobacter sp. B04 [MUNV] 214936 215010 + Val CAC [ENA] ¡û
>W131218939 ATYD01000013 Gammaproteobacteria Rhodanobacter sp. OR444 [ATYD] 16874 16948 + Val CAC [ENA] ¡û
>W131219043 ATYF01000012 Gammaproteobacteria Rhodanobacter sp. OR92 [ATYF] 123939 124013 + Val CAC [ENA] ¡û
>WENV180028595 FTJE01090476 [FTJE] metagenome; soil 75 1 - Val CAC [ENA] ¢þ
>WENV180035962 FTLB01078345 [FTLB] metagenome; soil 72 146 + Val CAC [ENA] ¢þ
>WENV180099463 NMRC01006476 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 77 3 - Val CAC [ENA] ¢þ
>W141151903 AXBJ01000020 Gammaproteobacteria Rhodanobacter sp. OR87 [AXBJ] 161 87 - Val CAC [ENA] ¡û
>WENV183696698 OULU01000009 [OULU] metagenome; soil 204 278 + Val CAC [ENA] ¢þ
>WENV183736636 PJUC01027665 [PJUC] soil metagenome; Soil enriched on filter paper 352 278 - Val CAC [ENA] ¢þ
>W1910821931 MWIO01000024 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 1262 1188 - Val CAC [ENA] ¡û
>W1910821953 MWIO01000035 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 61281 61355 + Val CAC [ENA] ¡û
>W1910896598 NFZS01000004 Gammaproteobacteria Dyella jiangningensis FCAV SCS01 [NFZS] 289321 289395 + Val CAC [ENA] ¡û
>W1911199793 NRDP01000011 Gammaproteobacteria Dyella sp. AD56 [NRDP] 5793 5867 + Val CAC [ENA] ¡û
>W1810071379 PEER01000011 Gammaproteobacteria Rhodanobacter sp. TND4EH1 [PEER] 132671 132745 + Val CAC [ENA] ¡û
>W1810485606 QAVX01000035 Gammaproteobacteria Dyella sp. C11 [QAVX] 10930 11004 + Val CAC [ENA] ¡û
>W1810514373 QBUW01000007 Gammaproteobacteria Rhodanobacter thiooxydans CR1 [QBUW] 261373 261447 + Val CAC [ENA] ¡û
>W1810591918 QFWQ01000003 Gammaproteobacteria Rhodanobacter denitrificans Yn1 [QFWQ] 446080 446154 + Val CAC [ENA] ¡û
>W1810628321 QICJ01000001 Gammaproteobacteria Dyella sp. AtDHG13 [QICJ] 670783 670857 + Val CAC [ENA] ¡û
>W1810629426 QIRF01000006 Gammaproteobacteria Dyella sp. C9 [QIRF] 145666 145740 + Val CAC [ENA] ¡û
>W1810783239 QQSY01000001 Gammaproteobacteria Dyella solisilvae DHG54 [QQSY] 582974 583048 + Val CAC [ENA] ¡û
>C151023757 CP007444 Gammaproteobacteria Dyella jiangningensis SBZ3-12 [CP007444] 983755 983681 - Val CAC [Ensembl] ¡û
>C151039114 CP008884 Gammaproteobacteria Dyella japonica A8 [CP008884] 2424024 2423950 - Val CAC [Ensembl] ¡û
>ENV09004060 ADIG01001850 Groundwater metagenome 4000601.lucy.pga.C1 1381 1455 + Val CAC [ENA] ¡û
>W1511305071 JPLA01000035 Gammaproteobacteria Dyella japonica DSM 16301 [JPLA] 22337 22411 + Val CAC [ENA] ¡û
>W11180875 AGIL01000003 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [AGIL] 187419 187345 - Val CAC [ENA] ¡û
>W121071238 AJXT01000004 Gammaproteobacteria Rhodanobacter spathiphylli B39 [AJXT] 272958 272884 - Val CAC [ENA] ¡û
>W121071355 AJXV01000050 Gammaproteobacteria Rhodanobacter denitrificans 116-2 [AJXV] 1761 1687 - Val CAC [ENA] ¡û
>W121071384 AJXW01000027 Gammaproteobacteria Rhodanobacter thiooxydans LCS2 [AJXW] 32477 32403 - Val CAC [ENA] ¡û
>W121113871 ALOY01000067 Gammaproteobacteria Dyella japonica A8 [ALOY] 5640 5566 - Val CAC [ENA] ¡û
>C131003740 CP003470 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [CP003470] 1380883 1380809 - Val CAC - ¡û
>W1610727320 LMGH01000011 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 126088 126014 - Val CAC [ENA] ¡û
>W1610729069 LMHR01000088 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 25543 25469 - Val CAC [ENA] ¡û
>W1610958350 LVJP01003711 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 8475 8401 - Val CAC [ENA] ¡û
>W1610958417 LVJQ01002916 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 22220 22146 - Val CAC [ENA] ¡û
>W1610958467 LVJR01000109 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 191 117 - Val CAC [ENA] ¡û
>W1610958480 LVJS01000034 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 50366 50292 - Val CAC [ENA] ¡û
>W1610958523 LVJT01000009 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 114583 114657 + Val CAC [ENA] ¡û
>W1610958586 LVJU01000073 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 11603 11677 + Val CAC [ENA] ¡û
>W1610958647 LVJV01001536 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 4511 4585 + Val CAC [ENA] ¡û
>W1610958661 LVJV01001811 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 2610 2684 + Val CAC [ENA] ¡û
>W1710519795 FNFA01000003 Gammaproteobacteria Dyella jiangningensis [FNFA] 4043 3969 - Val CAC [ENA] ¡û
>W1710541175 FNYC01000009 Gammaproteobacteria Frateuria terrea [FNYC] 93786 93860 + Val CAC [ENA] ¡û
>W1710573395 FOXL01000005 Gammaproteobacteria Frateuria terrea [FOXL] 93771 93845 + Val CAC [ENA] ¡û
Identical group No.685339 (2 seq.)
>W1911802756 QYUN01000002 Betaproteobacteria Noviherbaspirillum cavernae K2R10-39 [QYUN] 2428991 2428917 - Val CAC [ENA] ¡û
>ENV09004063 ADIG01003159 Groundwater metagenome 4000601.lucy.pga.C1 473 399 - Val CAC [ENA] ¡û
Identical group No.728023 (1 seq.)
>ENV09004012 ADIG01001041 Groundwater metagenome 4000601.lucy.pga.C1 88853 88779 - Val CAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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