tRNA genes clustered and arranged according to each identical group

Groundwater metagenome 4000601.lucy.pga.C1

Anticodon = GAC

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.654994 (105 seq.)
>W1710863216 LMEX01000004 Gammaproteobacteria Rhodanobacter sp. Root480 [LMEX] 252606 252532 - Val GAC [ENA] ¡û
>W1710864983 LMGH01000015 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 265981 265907 - Val GAC [ENA] ¡û
>W1710865702 LMGW01000004 Gammaproteobacteria Rhodanobacter sp. Root627 [LMGW] 244301 244227 - Val GAC [ENA] ¡û
>W1710866692 LMHR01000069 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 26411 26485 + Val GAC [ENA] ¡û
>W1710880541 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 28345 28419 + Val GAC [ENA] ¡û
>W1710880632 LMSL01000041 Gammaproteobacteria Frateuria sp. Soil773 [LMSL] 249170 249096 - Val GAC [ENA] ¡û
>W1711147404 LVJP01003740 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 7511 7585 + Val GAC [ENA] ¡û
>W1711147455 LVJQ01002692 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 75 1 - Val GAC [ENA] ¡û
>W1711147479 LVJR01000012 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 17382 17308 - Val GAC [ENA] ¡û
>W1711147522 LVJS01000025 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 25640 25714 + Val GAC [ENA] ¡û
>W1711147599 LVJT01000099 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 25075 25001 - Val GAC [ENA] ¡û
>W1711147646 LVJU01000118 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 19911 19985 + Val GAC [ENA] ¡û
>W1711147654 LVJV01000236 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 5601 5675 + Val GAC [ENA] ¡û
>W1711147675 LVJV01000979 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 2926 3000 + Val GAC [ENA] ¡û
>W1711386219 MEFB01000001 Gammaproteobacteria Rhodanobacter sp. SCN 67-45 [MEFB] 54643 54569 - Val GAC [ENA] ¡û
>W1711387232 MEGL01000001 Gammaproteobacteria Rhodanobacter sp. SCN 68-63 [MEGL] 27965 27891 - Val GAC [ENA] ¡û
>W1711503643 MKTU01000026 Gammaproteobacteria Rhodanobacter sp. 67-28 [MKTU] 124849 124923 + Val GAC [ENA] ¡û
>W1711505328 MKVK01000014 Alphaproteobacteria Magnetospirillum sp. 64-120 [MKVK] 133646 133720 + Val GAC [ENA] ¡û
>W1711506086 MKWC01000007 Gammaproteobacteria Rhodanobacter sp. 68-29 [MKWC] 114599 114525 - Val GAC [ENA] ¡û
>W1711751244 MUNP01000028 Gammaproteobacteria Rhodanobacter sp. C06 [MUNP] 70025 69951 - Val GAC [ENA] ¡û
>W1711751287 MUNQ01000006 Gammaproteobacteria Rhodanobacter sp. C05 [MUNQ] 415134 415208 + Val GAC [ENA] ¡û
>W1711751355 MUNR01000011 Gammaproteobacteria Rhodanobacter sp. C01 [MUNR] 438474 438548 + Val GAC [ENA] ¡û
>W1711751493 MUNU01000015 Gammaproteobacteria Rhodanobacter sp. B05 [MUNU] 123210 123284 + Val GAC [ENA] ¡û
>W1711751523 MUNV01000009 Gammaproteobacteria Rhodanobacter sp. B04 [MUNV] 43731 43657 - Val GAC [ENA] ¡û
>C171063370 CP017480 Gammaproteobacteria Luteibacter rhizovicinus DSM 16549 LJ96 [CP017480] 2926885 2926959 + Val GAC - ¡û
>W131046202 AMSF01000082 Gammaproteobacteria Dyella ginsengisoli LA-4 [AMSF] 51772 51698 - Val GAC [ENA] ¡û
>W131218959 ATYD01000178 Gammaproteobacteria Rhodanobacter sp. OR444 [ATYD] 7419 7493 + Val GAC [ENA] ¡û
>W131219036 ATYF01000007 Gammaproteobacteria Rhodanobacter sp. OR92 [ATYF] 64348 64274 - Val GAC [ENA] ¡û
>WENV180035769 FTLB01005601 [FTLB] metagenome; soil 116 190 + Val GAC [ENA] ¢þ
>WENV180259737 OBEQ011134786 [OBEQ] groundwater metagenome; groundwater 179 105 - Val GAC [ENA] ¢þ
>WENV181221721 OFCW01003780 [OFCW] microbial mat metagenome; Microbial Mat 2 76 + Val GAC [ENA] ¢þ
>WENV181308110 OFIS01000224 [OFIS] sludge metagenome; sludge 37803 37877 + Val GAC [ENA] ¢þ
>WENV181401397 OFTX01000101 [OFTX] sludge metagenome; sludge 15388 15314 - Val GAC [ENA] ¢þ
>WENV181401708 OFTX01003430 [OFTX] sludge metagenome; sludge 3704 3630 - Val GAC [ENA] ¢þ
>WENV181401787 OFTX01006520 [OFTX] sludge metagenome; sludge 1022 948 - Val GAC [ENA] ¢þ
>WENV181402064 OFTY01000076 [OFTY] sludge metagenome; sludge 37545 37619 + Val GAC [ENA] ¢þ
>W141151888 AXBJ01000004 Gammaproteobacteria Rhodanobacter sp. OR87 [AXBJ] 69589 69515 - Val GAC [ENA] ¡û
>WENV170706106 LNAP01001134 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 5545 5619 + Val GAC [ENA] ¢þ
>C191186005 CP041046 Gammaproteobacteria Luteibacter pinisoli MAH-14 [CP041046] 1388457 1388531 + Val GAC - ¡û
>W141820694 JQNB01000001 Gammaproteobacteria Luteibacter sp. 9135 [JQNB] 2285817 2285891 + Val GAC [ENA] ¡û
>W141820816 JQND01000001 Gammaproteobacteria Luteibacter sp. 9145 [JQND] 3271512 3271438 - Val GAC [ENA] ¡û
>W141821258 JQNL01000001 Gammaproteobacteria Luteibacter sp. 9143a 9143 [JQNL] 3655368 3655442 + Val GAC [ENA] ¡û
>W1910821927 MWIO01000013 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 41390 41316 - Val GAC [ENA] ¡û
>W1910841554 NADW01000002 Bacillota Bacillus sp. SRB_336 [NADW] 151727 151801 + Val GAC [ENA] ¡û
>W1910896603 NFZS01000004 Gammaproteobacteria Dyella jiangningensis FCAV SCS01 [NFZS] 705697 705623 - Val GAC [ENA] ¡û
>W1911199787 NRDP01000003 Gammaproteobacteria Dyella sp. AD56 [NRDP] 132631 132705 + Val GAC [ENA] ¡û
>W1810071348 PEER01000009 Gammaproteobacteria Rhodanobacter sp. TND4EH1 [PEER] 17623 17697 + Val GAC [ENA] ¡û
>SRA1003496 SRR002326.506539 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 15 89 + Val GAC [SRA]
>W1810477568 QAOX01000004 Gammaproteobacteria Luteibacter sp. OK325 [QAOX] 440372 440298 - Val GAC [ENA] ¡û
>W1810485569 QAVX01000005 Gammaproteobacteria Dyella sp. C11 [QAVX] 144549 144475 - Val GAC [ENA] ¡û
>W1810514371 QBUW01000005 Gammaproteobacteria Rhodanobacter thiooxydans CR1 [QBUW] 96612 96686 + Val GAC [ENA] ¡û
>W1810591932 QFWQ01000004 Gammaproteobacteria Rhodanobacter denitrificans Yn1 [QFWQ] 138825 138899 + Val GAC [ENA] ¡û
>W1810628351 QICJ01000006 Gammaproteobacteria Dyella sp. AtDHG13 [QICJ] 149080 149154 + Val GAC [ENA] ¡û
>W1810629442 QIRF01000023 Gammaproteobacteria Dyella sp. C9 [QIRF] 56423 56497 + Val GAC [ENA] ¡û
>W1810762601 QQAH01000005 Gammaproteobacteria Dyella tabacisoli L4-6 [QQAH] 126230 126304 + Val GAC [ENA] ¡û
>W1810783244 QQSY01000001 Gammaproteobacteria Dyella solisilvae DHG54 [QQSY] 1091929 1091855 - Val GAC [ENA] ¡û
>C151023710 CP007444 Gammaproteobacteria Dyella jiangningensis SBZ3-12 [CP007444] 594133 594207 + Val GAC [Ensembl] ¡û
>C151039075 CP008884 Gammaproteobacteria Dyella japonica A8 [CP008884] 2009547 2009621 + Val GAC [Ensembl] ¡û
>ENV09003376 ADGO01027222 Compost metagenome contig00001 664 590 - Val GAC [ENA] ¡û
>ENV09004028 ADIG01001045 Groundwater metagenome 4000601.lucy.pga.C1 112692 112766 + Val GAC [ENA] ¡û
>W1511305092 JPLB01000013 Gammaproteobacteria Luteibacter rhizovicinus DSM 16549 [JPLB] 135346 135420 + Val GAC [ENA] ¡û
>W1511305269 JPLD01000262 Gammaproteobacteria Xanthomonas hyacinthi DSM 19077 [JPLD] 18879 18805 - Val GAC [ENA] ¡û
>W1511352597 JROI01000008 Gammaproteobacteria Oleiagrimonas soli 3.5X [JROI] 312942 313016 + Val GAC [ENA] ¡û
>W1511433892 JUHO01000001 Gammaproteobacteria Luteibacter sp. 9133 [JUHO] 1272985 1273059 + Val GAC [ENA] ¡û
>W1511547590 JZRB01000030 Gammaproteobacteria Luteibacter yeojuensis SU11 [JZRB] 135613 135539 - Val GAC [ENA] ¡û
>W11180878 AGIL01000004 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [AGIL] 185822 185896 + Val GAC [ENA] ¡û
>C121011582 CP003350 Gammaproteobacteria Frateuria aurantia DSM 6220 [CP003350] 2640581 2640507 - Val GAC [Ensembl] ¡û
>C161078250 CP014841 Gammaproteobacteria Dyella thiooxydans ATSB10 [CP014841] 2173612 2173538 - Val GAC [Ensembl] ¡û
>C161085651 CP015249 Gammaproteobacteria Dokdonella koreensis DS-123 [CP015249] 2871833 2871759 - Val GAC [Ensembl] ¡û
>W121017554 AGRV01000013 Gammaproteobacteria Frateuria aurantia DSM 6220 [AGRV] 60030 60104 + Val GAC [ENA] ¡û
>W121071210 AJXS01000379 Gammaproteobacteria Rhodanobacter sp. 115 [AJXS] 7729 7803 + Val GAC [ENA] ¡û
>W121071248 AJXT01000024 Gammaproteobacteria Rhodanobacter spathiphylli B39 [AJXT] 42255 42329 + Val GAC [ENA] ¡û
>W121071275 AJXU01000015 Gammaproteobacteria Rhodanobacter fulvus Jip2 [AJXU] 88643 88569 - Val GAC [ENA] ¡û
>W121071319 AJXV01000003 Gammaproteobacteria Rhodanobacter denitrificans 116-2 [AJXV] 116842 116916 + Val GAC [ENA] ¡û
>W121071367 AJXW01000003 Gammaproteobacteria Rhodanobacter thiooxydans LCS2 [AJXW] 68875 68949 + Val GAC [ENA] ¡û
>W121113914 ALOY01000183 Gammaproteobacteria Dyella japonica A8 [ALOY] 87973 88047 + Val GAC [ENA] ¡û
>C131003725 CP003470 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [CP003470] 2935859 2935785 - Val GAC - ¡û
>W1610616786 LGRQ01000140 Gammaproteobacteria Luteibacter rhizovicinus [LGRQ] 6414 6488 + Val GAC [ENA] ¡û
>W1610725562 LMEX01000004 Gammaproteobacteria Rhodanobacter sp. Root480 [LMEX] 252606 252532 - Val GAC [ENA] ¡û
>W1610727329 LMGH01000015 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 265981 265907 - Val GAC [ENA] ¡û
>W1610728048 LMGW01000004 Gammaproteobacteria Rhodanobacter sp. Root627 [LMGW] 244301 244227 - Val GAC [ENA] ¡û
>W1610729038 LMHR01000069 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 26411 26485 + Val GAC [ENA] ¡û
>W1610742887 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 28345 28419 + Val GAC [ENA] ¡û
>W1610742978 LMSL01000041 Gammaproteobacteria Frateuria sp. Soil773 [LMSL] 249170 249096 - Val GAC [ENA] ¡û
>W1610958357 LVJP01003740 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 7511 7585 + Val GAC [ENA] ¡û
>W1610958408 LVJQ01002692 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 75 1 - Val GAC [ENA] ¡û
>W1610958432 LVJR01000012 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 17382 17308 - Val GAC [ENA] ¡û
>W1610958475 LVJS01000025 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 25640 25714 + Val GAC [ENA] ¡û
>W1610958552 LVJT01000099 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 25075 25001 - Val GAC [ENA] ¡û
>W1610958599 LVJU01000118 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 19911 19985 + Val GAC [ENA] ¡û
>W1610958607 LVJV01000236 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 5601 5675 + Val GAC [ENA] ¡û
>W1610958628 LVJV01000979 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 2926 3000 + Val GAC [ENA] ¡û
>W1710515285 FNBR01000005 Gammaproteobacteria Dyella sp. 333MFSha [FNBR] 101981 101907 - Val GAC [ENA] ¡û
>W1710519815 FNFA01000005 Gammaproteobacteria Dyella jiangningensis [FNFA] 202148 202074 - Val GAC [ENA] ¡û
>W1710541170 FNYC01000006 Gammaproteobacteria Frateuria terrea [FNYC] 96782 96856 + Val GAC [ENA] ¡û
>W1710545795 FOBU01000002 Gammaproteobacteria Luteibacter sp. UNCMF331Sha3.1 [FOBU] 604709 604783 + Val GAC [ENA] ¡û
>W1710548700 FODZ01000003 Gammaproteobacteria Luteibacter sp. UNC138MFCol5.1 [FODZ] 624826 624752 - Val GAC [ENA] ¡û
>W1710555201 FOJE01000001 Gammaproteobacteria Luteibacter sp. 329MFSha [FOJE] 1928775 1928701 - Val GAC [ENA] ¡û
>W1710567372 FOSR01000017 Gammaproteobacteria Rhodanobacter glycinis [FOSR] 20170 20244 + Val GAC [ENA] ¡û
>W1710573399 FOXL01000005 Gammaproteobacteria Frateuria terrea [FOXL] 395435 395361 - Val GAC [ENA] ¡û
>W1710575657 FOZI01000002 Gammaproteobacteria Dyella sp. OK004 [FOZI] 746050 745976 - Val GAC [ENA] ¡û
>W1710579676 FPIS01000002 Gammaproteobacteria Luteibacter sp. UNCMF366Tsu5.1 [FPIS] 822561 822635 + Val GAC [ENA] ¡û
>W1710592232 FRCH01000003 Gammaproteobacteria Rhodanobacter sp. OK091 [FRCH] 232404 232478 + Val GAC [ENA] ¡û
>W1710603043 FUYT01000004 Gammaproteobacteria Luteibacter sp. 22Crub2.1 [FUYT] 183846 183920 + Val GAC [ENA] ¡û
>W1710742125 LGRQ01000140 Gammaproteobacteria Luteibacter rhizovicinus [LGRQ] 6414 6488 + Val GAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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