tRNA genes clustered and arranged according to each identical group

Groundwater metagenome 4000601.lucy.pga.C1

Anticodon = GAT

HIT: 1 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.273513 (57 seq.)
>W1710863202 LMEX01000002 Gammaproteobacteria Rhodanobacter sp. Root480 [LMEX] 1334967 1335043 + Ile GAT [ENA] ¡û
>W1710864986 LMGH01000016 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 278881 278957 + Ile GAT [ENA] ¡û
>W1710865688 LMGW01000002 Gammaproteobacteria Rhodanobacter sp. Root627 [LMGW] 1287281 1287357 + Ile GAT [ENA] ¡û
>W1710880574 LMSK01000002 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 1178309 1178385 + Ile GAT [ENA] ¡û
>W1711147373 LVJP01003384 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 1498 1574 + Ile GAT [ENA] ¡û
>W1711147416 LVJQ01000097 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 276 352 + Ile GAT [ENA] ¡û
>W1711147418 LVJQ01000141 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 343 267 - Ile GAT [ENA] ¡û
>W1711147508 LVJR01000068 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 3756 3680 - Ile GAT [ENA] ¡û
>W1711147549 LVJS01000094 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 3504 3428 - Ile GAT [ENA] ¡û
>W1711147576 LVJT01000056 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 1911 1987 + Ile GAT [ENA] ¡û
>W1711147630 LVJU01000063 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 3787 3711 - Ile GAT [ENA] ¡û
>W1711147664 LVJV01000790 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 304 228 - Ile GAT [ENA] ¡û
>W1711147666 LVJV01000795 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 305 229 - Ile GAT [ENA] ¡û
>W1711751319 MUNQ01000021 Gammaproteobacteria Rhodanobacter sp. C05 [MUNQ] 1987 2063 + Ile GAT [ENA] ¡û
>W1711751330 MUNR01000001 Gammaproteobacteria Rhodanobacter sp. C01 [MUNR] 3639 3563 - Ile GAT [ENA] ¡û
>W1711751461 MUNT01000015 Gammaproteobacteria Rhodanobacter sp. C03 [MUNT] 1919 1995 + Ile GAT [ENA] ¡û
>W1711751463 MUNU01000002 Gammaproteobacteria Rhodanobacter sp. B05 [MUNU] 2024 2100 + Ile GAT [ENA] ¡û
>W131218935 ATYD01000004 Gammaproteobacteria Rhodanobacter sp. OR444 [ATYD] 3744 3668 - Ile GAT [ENA] ¡û
>W131219059 ATYF01000026 Gammaproteobacteria Rhodanobacter sp. OR92 [ATYF] 1981 2057 + Ile GAT [ENA] ¡û
>WENV180099492 NMRC01008514 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 2026 2102 + Ile GAT [ENA] ¢þ
>WENV180263289 OBEQ011463001 [OBEQ] groundwater metagenome; groundwater 261 337 + Ile GAT [ENA] ¢þ
>W141151894 AXBJ01000008 Gammaproteobacteria Rhodanobacter sp. OR87 [AXBJ] 156319 156395 + Ile GAT [ENA] ¡û
>W141151901 AXBJ01000019 Gammaproteobacteria Rhodanobacter sp. OR87 [AXBJ] 3689 3613 - Ile GAT [ENA] ¡û
>W141151906 AXBJ01000026 Gammaproteobacteria Rhodanobacter sp. OR87 [AXBJ] 2030 2106 + Ile GAT [ENA] ¡û
>W141151913 AXBJ01000036 Gammaproteobacteria Rhodanobacter sp. OR87 [AXBJ] 24072 23996 - Ile GAT [ENA] ¡û
>WENV183736479 PJUC01006167 [PJUC] soil metagenome; Soil enriched on filter paper 748 824 + Ile GAT [ENA] ¢þ
>WENV170556581 CXWL01010801 [CXWL] groundwater metagenome; biofilm material 1318 1394 + Ile GAT [ENA] ¢þ
>WENV170705410 LNAO01000205 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 8658 8582 - Ile GAT [ENA] ¢þ
>WENV170707842 LNAP01036356 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1499 1423 - Ile GAT [ENA] ¢þ
>W1910821960 MWIO01000080 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 2000 2076 + Ile GAT [ENA] ¡û
>W1910841613 NADW01000020 Bacillota Bacillus sp. SRB_336 [NADW] 3601 3525 - Ile GAT [ENA] ¡û
>W1810071346 PEER01000003 Gammaproteobacteria Rhodanobacter sp. TND4EH1 [PEER] 3615 3539 - Ile GAT [ENA] ¡û
>W1810514406 QBUW01000022 Gammaproteobacteria Rhodanobacter thiooxydans CR1 [QBUW] 1777 1853 + Ile GAT [ENA] ¡û
>W1810591953 QFWQ01000014 Gammaproteobacteria Rhodanobacter denitrificans Yn1 [QFWQ] 1905 1981 + Ile GAT [ENA] ¡û
>ENV09004050 ADIG01001062 Groundwater metagenome 4000601.lucy.pga.C1 60803 60727 - Ile GAT [ENA] ¡û
>W11180869 AGIL01000002 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [AGIL] 435085 435161 + Ile GAT [ENA] ¡û
>W11181126 AGIS01000011 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [AGIS] 3686 3610 - Ile GAT [ENA] ¡û
>W121071269 AJXT01000061 Gammaproteobacteria Rhodanobacter spathiphylli B39 [AJXT] 3612 3536 - Ile GAT [ENA] ¡û
>W121071290 AJXU01000048 Gammaproteobacteria Rhodanobacter fulvus Jip2 [AJXU] 1918 1994 + Ile GAT [ENA] ¡û
>W121071356 AJXV01000059 Gammaproteobacteria Rhodanobacter denitrificans 116-2 [AJXV] 2028 2104 + Ile GAT [ENA] ¡û
>W121071407 AJXW01000099 Gammaproteobacteria Rhodanobacter thiooxydans LCS2 [AJXW] 2039 2115 + Ile GAT [ENA] ¡û
>C131003694 CP003470 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [CP003470] 436546 436622 + Ile GAT - ¡û
>C131003718 CP003470 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [CP003470] 4088788 4088712 - Ile GAT - ¡û
>W1610725548 LMEX01000002 Gammaproteobacteria Rhodanobacter sp. Root480 [LMEX] 1334967 1335043 + Ile GAT [ENA] ¡û
>W1610727332 LMGH01000016 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 278881 278957 + Ile GAT [ENA] ¡û
>W1610728034 LMGW01000002 Gammaproteobacteria Rhodanobacter sp. Root627 [LMGW] 1287281 1287357 + Ile GAT [ENA] ¡û
>W1610742920 LMSK01000002 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 1178309 1178385 + Ile GAT [ENA] ¡û
>W1610958326 LVJP01003384 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 1498 1574 + Ile GAT [ENA] ¡û
>W1610958369 LVJQ01000097 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 276 352 + Ile GAT [ENA] ¡û
>W1610958371 LVJQ01000141 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 343 267 - Ile GAT [ENA] ¡û
>W1610958461 LVJR01000068 Gammaproteobacteria Rhodanobacter sp. FW104-R8 [LVJR] 3756 3680 - Ile GAT [ENA] ¡û
>W1610958502 LVJS01000094 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 3504 3428 - Ile GAT [ENA] ¡û
>W1610958529 LVJT01000056 Gammaproteobacteria Rhodanobacter sp. FW510-T8 [LVJT] 1911 1987 + Ile GAT [ENA] ¡û
>W1610958583 LVJU01000063 Gammaproteobacteria Rhodanobacter sp. FW510-R10 [LVJU] 3787 3711 - Ile GAT [ENA] ¡û
>W1610958617 LVJV01000790 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 304 228 - Ile GAT [ENA] ¡û
>W1610958619 LVJV01000795 Gammaproteobacteria Rhodanobacter sp. FW510-R12 [LVJV] 305 229 - Ile GAT [ENA] ¡û
>W1710592236 FRCH01000009 Gammaproteobacteria Rhodanobacter sp. OK091 [FRCH] 2011 2087 + Ile GAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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