tRNA genes clustered and arranged according to each identical group

Groundwater metagenome 4000601.lucy.pga.C1

Anticodon = GCA

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.780151 (21 seq.)
>W1710864958 LMGH01000010 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 209478 209551 + Cys GCA [ENA] ¡û
>W1710866708 LMHR01000087 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 145 218 + Cys GCA [ENA] ¡û
>W1710880564 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 752858 752785 - Cys GCA [ENA] ¡û
>W1711386235 MEFB01000005 Gammaproteobacteria Rhodanobacter sp. SCN 67-45 [MEFB] 54911 54984 + Cys GCA [ENA] ¡û
>W1711387236 MEGL01000002 Gammaproteobacteria Rhodanobacter sp. SCN 68-63 [MEGL] 78204 78277 + Cys GCA [ENA] ¡û
>W1711503674 MKTU01000051 Gammaproteobacteria Rhodanobacter sp. 67-28 [MKTU] 13783 13710 - Cys GCA [ENA] ¡û
>W1711506080 MKWC01000004 Gammaproteobacteria Rhodanobacter sp. 68-29 [MKWC] 496318 496391 + Cys GCA [ENA] ¡û
>W1711751365 MUNR01000012 Gammaproteobacteria Rhodanobacter sp. C01 [MUNR] 269192 269119 - Cys GCA [ENA] ¡û
>W1711751490 MUNU01000014 Gammaproteobacteria Rhodanobacter sp. B05 [MUNU] 90064 89991 - Cys GCA [ENA] ¡û
>WENV181308159 OFIS01000354 [OFIS] sludge metagenome; sludge 7120 7047 - Cys GCA [ENA] ¢þ
>WENV181401362 OFTX01000040 [OFTX] sludge metagenome; sludge 76445 76518 + Cys GCA [ENA] ¢þ
>WENV181402562 OFTY01004259 [OFTY] sludge metagenome; sludge 2713 2640 - Cys GCA [ENA] ¢þ
>WENV183736581 PJUC01015429 [PJUC] soil metagenome; Soil enriched on filter paper 606 533 - Cys GCA [ENA] ¢þ
>WENV170706405 LNAP01002870 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 13375 13302 - Cys GCA [ENA] ¢þ
>W1910821921 MWIO01000008 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 60894 60821 - Cys GCA [ENA] ¡û
>W1810071359 PEER01000009 Gammaproteobacteria Rhodanobacter sp. TND4EH1 [PEER] 643926 643999 + Cys GCA [ENA] ¡û
>ENV09004033 ADIG01001046 Groundwater metagenome 4000601.lucy.pga.C1 344820 344893 + Cys GCA [ENA] ¡û
>W121071261 AJXT01000042 Gammaproteobacteria Rhodanobacter spathiphylli B39 [AJXT] 43878 43805 - Cys GCA [ENA] ¡û
>W1610727304 LMGH01000010 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 209478 209551 + Cys GCA [ENA] ¡û
>W1610729054 LMHR01000087 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 145 218 + Cys GCA [ENA] ¡û
>W1610742910 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 752858 752785 - Cys GCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK