tRNA genes clustered and arranged according to each identical group

Groundwater metagenome 4000601.lucy.pga.C1

Anticodon = TAC

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.654992 (55 seq.)
>W1710863179 LMEX01000001 Gammaproteobacteria Rhodanobacter sp. Root480 [LMEX] 530598 530672 + Val TAC [ENA] ¡û
>W1710864967 LMGH01000011 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 409814 409888 + Val TAC [ENA] ¡û
>W1710865666 LMGW01000001 Gammaproteobacteria Rhodanobacter sp. Root627 [LMGW] 560703 560777 + Val TAC [ENA] ¡û
>W1710866714 LMHR01000088 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 309745 309819 + Val TAC [ENA] ¡û
>W1710880549 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 501487 501561 + Val TAC [ENA] ¡û
>W1711147379 LVJP01003511 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 153 79 - Val TAC [ENA] ¡û
>W1711147451 LVJQ01002391 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 97 23 - Val TAC [ENA] ¡û
>W1711147541 LVJS01000052 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 62678 62752 + Val TAC [ENA] ¡û
>W1711386229 MEFB01000003 Gammaproteobacteria Rhodanobacter sp. SCN 67-45 [MEFB] 47531 47457 - Val TAC [ENA] ¡û
>W1711503661 MKTU01000036 Gammaproteobacteria Rhodanobacter sp. 67-28 [MKTU] 69024 68950 - Val TAC [ENA] ¡û
>W1711751327 MUNQ01000022 Gammaproteobacteria Rhodanobacter sp. C05 [MUNQ] 6556 6482 - Val TAC [ENA] ¡û
>W1711751440 MUNT01000006 Gammaproteobacteria Rhodanobacter sp. C03 [MUNT] 92502 92576 + Val TAC [ENA] ¡û
>W1711751471 MUNU01000003 Gammaproteobacteria Rhodanobacter sp. B05 [MUNU] 94485 94559 + Val TAC [ENA] ¡û
>W1711751540 MUNV01000018 Gammaproteobacteria Rhodanobacter sp. B04 [MUNV] 53417 53491 + Val TAC [ENA] ¡û
>W131218971 ATYD01000217 Gammaproteobacteria Rhodanobacter sp. OR444 [ATYD] 17293 17367 + Val TAC [ENA] ¡û
>W131219020 ATYF01000001 Gammaproteobacteria Rhodanobacter sp. OR92 [ATYF] 276138 276212 + Val TAC [ENA] ¡û
>WENV180099556 NMRC01017083 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 2417 2343 - Val TAC [ENA] ¢þ
>WENV181401608 OFTX01001431 [OFTX] sludge metagenome; sludge 995 921 - Val TAC [ENA] ¢þ
>W141151878 AXBJ01000003 Gammaproteobacteria Rhodanobacter sp. OR87 [AXBJ] 239183 239257 + Val TAC [ENA] ¡û
>WENV182555502 OJDB01000009 [OJDB] seawater metagenome; Sea water 7070 7144 + Val TAC [ENA] ¢þ
>WENV182555639 OJDC01010578 [OJDC] seawater metagenome; Sea water 469 543 + Val TAC [ENA] ¢þ
>WENV182559369 OJDP01000204 [OJDP] seawater metagenome; Sea water 1356 1282 - Val TAC [ENA] ¢þ
>WENV182560142 OJDT01000638 [OJDT] seawater metagenome; Sea water 241 167 - Val TAC [ENA] ¢þ
>WENV182568259 OJES01005607 [OJES] seawater metagenome; Sea water 179 105 - Val TAC [ENA] ¢þ
>WENV182572821 OJFM01020771 [OJFM] seawater metagenome; Sea water 448 522 + Val TAC [ENA] ¢þ
>WENV182572992 OJFO01014655 [OJFO] seawater metagenome; Sea water 451 525 + Val TAC [ENA] ¢þ
>WENV182577395 OJGE01000015 [OJGE] seawater metagenome; Sea water 7048 7122 + Val TAC [ENA] ¢þ
>WENV182577529 OJGG01001084 [OJGG] seawater metagenome; Sea water 214 140 - Val TAC [ENA] ¢þ
>WENV182589143 OJHZ01000038 [OJHZ] seawater metagenome; Sea water 2183 2109 - Val TAC [ENA] ¢þ
>WENV182593267 OJIT01018317 [OJIT] seawater metagenome; Sea water 440 514 + Val TAC [ENA] ¢þ
>WENV183058271 OLHP01000199 [OLHP] seawater metagenome; Sea water 2024 1950 - Val TAC [ENA] ¢þ
>WENV183058353 OLHQ01000643 [OLHQ] seawater metagenome; Sea water 3237 3311 + Val TAC [ENA] ¢þ
>WENV170706012 LNAP01000839 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 15569 15643 + Val TAC [ENA] ¢þ
>W1910821946 MWIO01000032 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 70230 70304 + Val TAC [ENA] ¡û
>W1910841574 NADW01000002 Bacillota Bacillus sp. SRB_336 [NADW] 1155278 1155204 - Val TAC [ENA] ¡û
>W1810071367 PEER01000009 Gammaproteobacteria Rhodanobacter sp. TND4EH1 [PEER] 968884 968810 - Val TAC [ENA] ¡û
>W1810514400 QBUW01000016 Gammaproteobacteria Rhodanobacter thiooxydans CR1 [QBUW] 6737 6663 - Val TAC [ENA] ¡û
>ENV09004020 ADIG01001044 Groundwater metagenome 4000601.lucy.pga.C1 171875 171949 + Val TAC [ENA] ¡û
>W11180893 AGIL01000007 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [AGIL] 86771 86845 + Val TAC [ENA] ¡û
>W121071220 AJXS01000394 Gammaproteobacteria Rhodanobacter sp. 115 [AJXS] 4815 4741 - Val TAC [ENA] ¡û
>W121071231 AJXT01000004 Gammaproteobacteria Rhodanobacter spathiphylli B39 [AJXT] 534166 534240 + Val TAC [ENA] ¡û
>W121071309 AJXU01000075 Gammaproteobacteria Rhodanobacter fulvus Jip2 [AJXU] 46411 46337 - Val TAC [ENA] ¡û
>W121071342 AJXV01000030 Gammaproteobacteria Rhodanobacter denitrificans 116-2 [AJXV] 15304 15378 + Val TAC [ENA] ¡û
>W121071377 AJXW01000020 Gammaproteobacteria Rhodanobacter thiooxydans LCS2 [AJXW] 111677 111751 + Val TAC [ENA] ¡û
>C131003733 CP003470 Gammaproteobacteria Rhodanobacter denitrificans 2APBS1 [CP003470] 2428447 2428373 - Val TAC - ¡û
>W1610725525 LMEX01000001 Gammaproteobacteria Rhodanobacter sp. Root480 [LMEX] 530598 530672 + Val TAC [ENA] ¡û
>W1610727313 LMGH01000011 Gammaproteobacteria Rhodanobacter sp. Root561 [LMGH] 409814 409888 + Val TAC [ENA] ¡û
>W1610728012 LMGW01000001 Gammaproteobacteria Rhodanobacter sp. Root627 [LMGW] 560703 560777 + Val TAC [ENA] ¡û
>W1610729060 LMHR01000088 Gammaproteobacteria Rhodanobacter sp. Root179 [LMHR] 309745 309819 + Val TAC [ENA] ¡û
>W1610742895 LMSK01000001 Gammaproteobacteria Rhodanobacter sp. Soil772 [LMSK] 501487 501561 + Val TAC [ENA] ¡û
>W1610958332 LVJP01003511 Gammaproteobacteria Rhodanobacter denitrificans [LVJP] 153 79 - Val TAC [ENA] ¡û
>W1610958404 LVJQ01002391 Gammaproteobacteria Rhodanobacter sp. FW104-R5 [LVJQ] 97 23 - Val TAC [ENA] ¡û
>W1610958494 LVJS01000052 Gammaproteobacteria Rhodanobacter thiooxydans [LVJS] 62678 62752 + Val TAC [ENA] ¡û
>W1710567370 FOSR01000015 Gammaproteobacteria Rhodanobacter glycinis [FOSR] 67896 67822 - Val TAC [ENA] ¡û
>W1710592216 FRCH01000001 Gammaproteobacteria Rhodanobacter sp. OK091 [FRCH] 59826 59752 - Val TAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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