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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Gut microbiome of Human (healthy human sample In-A, Adult, Male)
Anticodon = CTA
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.653387 (135 seq.)
>WENV180163015
OAVH01000609
[OAVH] human gut metagenome; faeces
1205
1279
+
Sup
CTA
[ENA]
¢þ
>WENV180277415
OBHX01000071
[OBHX] metagenome; feces
65963
65889
-
Sup
CTA
[ENA]
¢þ
>WENV180347213
OBLO01000075
[OBLO] metagenome; feces
94632
94558
-
Sup
CTA
[ENA]
¢þ
>WENV180560939
OCKX01000001
[OCKX] human gut metagenome; human gut
42513
42439
-
Sup
CTA
[ENA]
¢þ
>WENV180785880
ODIR01042855
[ODIR] human metagenome; G_DNA_Stool
829
755
-
Sup
CTA
[ENA]
¢þ
>WENV180876036
ODLT01002298
[ODLT] human metagenome; G_DNA_Stool
3478
3552
+
Sup
CTA
[ENA]
¢þ
>WENV180904140
ODPF01000121
[ODPF] human metagenome; G_DNA_Stool
77775
77849
+
Sup
CTA
[ENA]
¢þ
>WENV181023019
ODWX01000049
[ODWX] human metagenome; G_DNA_Stool
94023
93949
-
Sup
CTA
[ENA]
¢þ
>WENV181329710
OFLY01000039
[OFLY] human gut metagenome; human gut
25048
24974
-
Sup
CTA
[ENA]
¢þ
>WENV181342352
OFMI01006469
[OFMI] human gut metagenome; human gut
1898
1824
-
Sup
CTA
[ENA]
¢þ
>WENV181347782
OFMM01031750
[OFMM] human gut metagenome; human gut
141
67
-
Sup
CTA
[ENA]
¢þ
>WENV181417463
OGCM01000213
[OGCM] human gut metagenome; human gut
78817
78743
-
Sup
CTA
[ENA]
¢þ
>WENV181445303
OGDS01002035
[OGDS] metagenome; Human gut stool
7899
7973
+
Sup
CTA
[ENA]
¢þ
>WENV181446643
OGDU01000078
[OGDU] metagenome; Human gut stool
21247
21173
-
Sup
CTA
[ENA]
¢þ
>WENV181449460
OGDX01000287
[OGDX] metagenome; Human gut stool
11052
11126
+
Sup
CTA
[ENA]
¢þ
>WENV181455768
OGEG01000116
[OGEG] metagenome; Human gut stool
75707
75781
+
Sup
CTA
[ENA]
¢þ
>WENV181460007
OGEL01002035
[OGEL] metagenome; Human gut stool
7899
7973
+
Sup
CTA
[ENA]
¢þ
>WENV181482886
OGFK01000075
[OGFK] metagenome; Human gut stool
92065
92139
+
Sup
CTA
[ENA]
¢þ
>WENV181503159
OGGJ01000910
[OGGJ] metagenome; Human gut stool
6944
7018
+
Sup
CTA
[ENA]
¢þ
>WENV181511085
OGGS01000262
[OGGS] metagenome; Human gut stool
122
196
+
Sup
CTA
[ENA]
¢þ
>WENV181545634
OGIH01000042
[OGIH] metagenome; Human gut stool
22864
22938
+
Sup
CTA
[ENA]
¢þ
>WENV181562804
OGJG01000056
[OGJG] metagenome; Human gut stool
72974
73048
+
Sup
CTA
[ENA]
¢þ
>WENV181611708
OGLS01000085
[OGLS] metagenome; Human gut stool
93578
93652
+
Sup
CTA
[ENA]
¢þ
>WENV181629076
OGMP01000024
[OGMP] metagenome; Human gut stool
73615
73689
+
Sup
CTA
[ENA]
¢þ
>WENV181630507
OGMQ01001885
[OGMQ] metagenome; Human gut stool
296
370
+
Sup
CTA
[ENA]
¢þ
>WENV181653936
OGNZ01000036
[OGNZ] metagenome; Human gut stool
30036
30110
+
Sup
CTA
[ENA]
¢þ
>WENV181693773
OGPB01000024
[OGPB] human gut metagenome; faeces
59544
59618
+
Sup
CTA
[ENA]
¢þ
>WENV181695980
OGPD01000052
[OGPD] human gut metagenome; faeces
35320
35246
-
Sup
CTA
[ENA]
¢þ
>WENV181740743
OGQJ01019926
[OGQJ] human gut metagenome; faeces
705
779
+
Sup
CTA
[ENA]
¢þ
>WENV181751967
OGQQ01000806
[OGQQ] human gut metagenome; faeces
3567
3641
+
Sup
CTA
[ENA]
¢þ
>WENV181766013
OGQZ01000040
[OGQZ] human gut metagenome; faeces
34016
34090
+
Sup
CTA
[ENA]
¢þ
>WENV181780242
OGRJ01000127
[OGRJ] human gut metagenome; faeces
65133
65059
-
Sup
CTA
[ENA]
¢þ
>WENV181785730
OGRN01000060
[OGRN] human gut metagenome; faeces
90871
90797
-
Sup
CTA
[ENA]
¢þ
>WENV181789152
OGRO01008405
[OGRO] human gut metagenome; faeces
3929
4003
+
Sup
CTA
[ENA]
¢þ
>WENV181832941
OGUQ01000069
[OGUQ] metagenome; Human gut stool
24080
24006
-
Sup
CTA
[ENA]
¢þ
>WENV181860105
OGWR01000033
[OGWR] human gut metagenome; faeces
89957
89883
-
Sup
CTA
[ENA]
¢þ
>WENV181879248
OGXF01000053
[OGXF] human gut metagenome; faeces
25786
25860
+
Sup
CTA
[ENA]
¢þ
>WENV181916528
OGYG01000098
[OGYG] human gut metagenome; faeces
92919
92845
-
Sup
CTA
[ENA]
¢þ
>WENV181929055
OGYO01008957
[OGYO] human gut metagenome; faeces
1491
1565
+
Sup
CTA
[ENA]
¢þ
>WENV181946006
OGZC01002606
[OGZC] human gut metagenome; faeces
1423
1349
-
Sup
CTA
[ENA]
¢þ
>WENV181946725
OGZD01000102
[OGZD] human gut metagenome; faeces
84558
84484
-
Sup
CTA
[ENA]
¢þ
>WENV181974021
OHAB01001331
[OHAB] human gut metagenome; faeces
14653
14579
-
Sup
CTA
[ENA]
¢þ
>WENV181994779
OHAT01000122
[OHAT] human gut metagenome; faeces
68543
68617
+
Sup
CTA
[ENA]
¢þ
>WENV182006803
OHBG01000226
[OHBG] human gut metagenome; feces
25431
25357
-
Sup
CTA
[ENA]
¢þ
>WENV182085465
OHGS01000074
[OHGS] human gut metagenome; feces
25450
25376
-
Sup
CTA
[ENA]
¢þ
>WENV182123783
OHJQ01000137
[OHJQ] human gut metagenome; feces
34196
34122
-
Sup
CTA
[ENA]
¢þ
>WENV182140151
OHKQ01000045
[OHKQ] human gut metagenome; feces
65847
65773
-
Sup
CTA
[ENA]
¢þ
>WENV182173528
OHNB01000981
[OHNB] human gut metagenome; feces
366
292
-
Sup
CTA
[ENA]
¢þ
>WENV182190544
OHOQ01000211
[OHOQ] human gut metagenome; feces
6870
6944
+
Sup
CTA
[ENA]
¢þ
>WENV182201792
OHPN01000856
[OHPN] human gut metagenome; feces
401
327
-
Sup
CTA
[ENA]
¢þ
>WENV182222071
OHQV01001815
[OHQV] human gut metagenome; feces
106
32
-
Sup
CTA
[ENA]
¢þ
>WENV182227263
OHRG01000093
[OHRG] human gut metagenome; feces
34396
34322
-
Sup
CTA
[ENA]
¢þ
>WENV182228054
OHRH01000037
[OHRH] human gut metagenome; feces
47804
47730
-
Sup
CTA
[ENA]
¢þ
>WENV182421828
OIGU01000079
[OIGU] human gut metagenome; human gut
34147
34221
+
Sup
CTA
[ENA]
¢þ
>WENV182425151
OIHK01000008
[OIHK] human gut metagenome; human gut
96684
96758
+
Sup
CTA
[ENA]
¢þ
>WENV182426433
OIHQ01000010
[OIHQ] human gut metagenome; human gut
117194
117268
+
Sup
CTA
[ENA]
¢þ
>WENV182433067
OIIS01000010
[OIIS] human gut metagenome; human gut
25306
25380
+
Sup
CTA
[ENA]
¢þ
>WENV182440362
OIJZ01000005
[OIJZ] human gut metagenome; human gut
67398
67324
-
Sup
CTA
[ENA]
¢þ
>WENV182443766
OIKP01000007
[OIKP] human gut metagenome; human gut
18910
18836
-
Sup
CTA
[ENA]
¢þ
>WENV182447408
OILF01000001
[OILF] human gut metagenome; human gut
12075
12149
+
Sup
CTA
[ENA]
¢þ
>WENV182450346
OILW01000004
[OILW] human gut metagenome; human gut
77178
77252
+
Sup
CTA
[ENA]
¢þ
>WENV182452236
OIMD01000006
[OIMD] human gut metagenome; human gut
91644
91570
-
Sup
CTA
[ENA]
¢þ
>WENV182456048
OIMW01000001
[OIMW] human gut metagenome; human gut
68347
68421
+
Sup
CTA
[ENA]
¢þ
>WENV182463020
OIOB01000003
[OIOB] human gut metagenome; human gut
78516
78590
+
Sup
CTA
[ENA]
¢þ
>WENV182463442
OIOD01000003
[OIOD] human gut metagenome; human gut
55317
55243
-
Sup
CTA
[ENA]
¢þ
>WENV182464664
OIOK01000005
[OIOK] human gut metagenome; human gut
34330
34404
+
Sup
CTA
[ENA]
¢þ
>WENV182467096
OIOT01000010
[OIOT] human gut metagenome; human gut
12075
12149
+
Sup
CTA
[ENA]
¢þ
>WENV182467755
OIOW01000003
[OIOW] human gut metagenome; human gut
83896
83822
-
Sup
CTA
[ENA]
¢þ
>WENV182469027
OIPC01000005
[OIPC] human gut metagenome; human gut
12956
13030
+
Sup
CTA
[ENA]
¢þ
>WENV182476426
OIQH01000008
[OIQH] human gut metagenome; human gut
102179
102253
+
Sup
CTA
[ENA]
¢þ
>WENV182481598
OIRC01000027
[OIRC] human gut metagenome; human gut
23830
23756
-
Sup
CTA
[ENA]
¢þ
>WENV182485037
OIRO01000006
[OIRO] human gut metagenome; human gut
59430
59356
-
Sup
CTA
[ENA]
¢þ
>WENV182487344
OIRW01000005
[OIRW] human gut metagenome; human gut
30237
30163
-
Sup
CTA
[ENA]
¢þ
>WENV182496678
OITH01000078
[OITH] human gut metagenome; human gut
35772
35846
+
Sup
CTA
[ENA]
¢þ
>WENV182504340
OIUU01000009
[OIUU] human gut metagenome; human gut
29406
29332
-
Sup
CTA
[ENA]
¢þ
>WENV182618736
OJKG01000142
[OJKG] metagenome; faeces
2350
2424
+
Sup
CTA
[ENA]
¢þ
>WENV182620538
OJKI01007469
[OJKI] metagenome; faeces
1883
1809
-
Sup
CTA
[ENA]
¢þ
>WENV182627529
OJKQ01000074
[OJKQ] metagenome; faeces
41996
42070
+
Sup
CTA
[ENA]
¢þ
>WENV182689756
OJOD01003927
[OJOD] human gut metagenome; stool sample
3510
3584
+
Sup
CTA
[ENA]
¢þ
>WENV182750965
OJQZ01015222
[OJQZ] human gut metagenome; stool sample
853
927
+
Sup
CTA
[ENA]
¢þ
>WENV182907487
OKTF01000036
[OKTF] human gut metagenome; feces
25431
25505
+
Sup
CTA
[ENA]
¢þ
>WENV182973407
OKXL01000005
[OKXL] human gut metagenome; human gut
59134
59060
-
Sup
CTA
[ENA]
¢þ
>WENV182974742
OKXS01000040
[OKXS] human gut metagenome; human gut
23830
23756
-
Sup
CTA
[ENA]
¢þ
>WENV182978899
OKYK01000072
[OKYK] human gut metagenome; human gut
35531
35605
+
Sup
CTA
[ENA]
¢þ
>WENV182993234
OLAY01000001
[OLAY] human gut metagenome; human gut
51127
51053
-
Sup
CTA
[ENA]
¢þ
>WENV182994785
OLBF01000001
[OLBF] human gut metagenome; human gut
22414
22340
-
Sup
CTA
[ENA]
¢þ
>WENV182998286
OLBT01000003
[OLBT] human gut metagenome; human gut
77410
77336
-
Sup
CTA
[ENA]
¢þ
>WENV183004849
OLCX01000005
[OLCX] human gut metagenome; human gut
24174
24100
-
Sup
CTA
[ENA]
¢þ
>WENV183008674
OLDN01000006
[OLDN] human gut metagenome; human gut
126777
126851
+
Sup
CTA
[ENA]
¢þ
>WENV183009771
OLDS01000011
[OLDS] human gut metagenome; human gut
107973
108047
+
Sup
CTA
[ENA]
¢þ
>WENV183016986
OLEU01000005
[OLEU] human gut metagenome; human gut
148321
148395
+
Sup
CTA
[ENA]
¢þ
>WENV183019655
OLFD01000017
[OLFD] human gut metagenome; human gut
37334
37260
-
Sup
CTA
[ENA]
¢þ
>WENV183019912
OLFE01000001
[OLFE] human gut metagenome; human gut
171077
171151
+
Sup
CTA
[ENA]
¢þ
>WENV183110224
OLNO01000074
[OLNO] human gut metagenome; faeces
12315
12389
+
Sup
CTA
[ENA]
¢þ
>WENV183134063
OLOC01003472
[OLOC] human gut metagenome; faeces
1290
1216
-
Sup
CTA
[ENA]
¢þ
>WENV183139709
OLOI01001601
[OLOI] human gut metagenome; faeces
12704
12630
-
Sup
CTA
[ENA]
¢þ
>WENV183157118
OLOT01000071
[OLOT] human gut metagenome; faeces
6811
6737
-
Sup
CTA
[ENA]
¢þ
>WENV183163187
OLOW01006405
[OLOW] human gut metagenome; faeces
5013
5087
+
Sup
CTA
[ENA]
¢þ
>WENV183175524
OLPF01000358
[OLPF] human gut metagenome; faeces
22024
21950
-
Sup
CTA
[ENA]
¢þ
>WENV183177368
OLPG01001057
[OLPG] human gut metagenome; faeces
4935
4861
-
Sup
CTA
[ENA]
¢þ
>WENV183225673
OLQO01000079
[OLQO] human gut metagenome; faeces
65620
65694
+
Sup
CTA
[ENA]
¢þ
>WENV183233079
OLQV01000240
[OLQV] human gut metagenome; faeces
46250
46176
-
Sup
CTA
[ENA]
¢þ
>WENV183247378
OLRF01003102
[OLRF] human gut metagenome; faeces
6830
6904
+
Sup
CTA
[ENA]
¢þ
>WENV183258866
OLRO01000069
[OLRO] human gut metagenome; faeces
77222
77296
+
Sup
CTA
[ENA]
¢þ
>WENV183267040
OLRT01035536
[OLRT] human gut metagenome; faeces
385
311
-
Sup
CTA
[ENA]
¢þ
>WENV183296679
OLSM01000081
[OLSM] human gut metagenome; faeces
24956
24882
-
Sup
CTA
[ENA]
¢þ
>WENV183304679
OLSS01000008
[OLSS] human gut metagenome; faeces
527
601
+
Sup
CTA
[ENA]
¢þ
>WENV183355412
OLXD01001975
[OLXD] human gut metagenome; feces
571
645
+
Sup
CTA
[ENA]
¢þ
>WENV183363360
OLXL01001387
[OLXL] human gut metagenome; feces
5670
5596
-
Sup
CTA
[ENA]
¢þ
>WENV183372780
OLXX01000339
[OLXX] human gut metagenome; feces
10387
10461
+
Sup
CTA
[ENA]
¢þ
>WENV183374501
OLXZ01002601
[OLXZ] human gut metagenome; feces
5976
5902
-
Sup
CTA
[ENA]
¢þ
>WENV183376147
OLYB01000074
[OLYB] human gut metagenome; feces
94351
94425
+
Sup
CTA
[ENA]
¢þ
>WENV183396762
OLZJ01000022
[OLZJ] human gut metagenome; feces
10666
10592
-
Sup
CTA
[ENA]
¢þ
>WENV183398180
OLZO01000076
[OLZO] human gut metagenome; feces
4350
4276
-
Sup
CTA
[ENA]
¢þ
>WENV183406730
OMAB01000024
[OMAB] human gut metagenome; feces
12429
12355
-
Sup
CTA
[ENA]
¢þ
>WENV183420984
OMBB01000225
[OMBB] human gut metagenome; feces
10689
10615
-
Sup
CTA
[ENA]
¢þ
>WENV183451165
OMDB01000217
[OMDB] human gut metagenome; feces
7858
7784
-
Sup
CTA
[ENA]
¢þ
>WENV183463380
OMDY01000159
[OMDY] human gut metagenome; feces
10243
10317
+
Sup
CTA
[ENA]
¢þ
>WENV183535644
OOAG01000060
[OOAG] human gut metagenome; human gut
70306
70380
+
Sup
CTA
[ENA]
¢þ
>WENV183544872
OOAP01001246
[OOAP] human gut metagenome; human gut
502
428
-
Sup
CTA
[ENA]
¢þ
>WENV183576218
OOCI01046281
[OOCI] human gut metagenome; human gut
707
781
+
Sup
CTA
[ENA]
¢þ
>WENV183576904
OOCJ01002440
[OOCJ] human gut metagenome; human gut
2482
2408
-
Sup
CTA
[ENA]
¢þ
>WENV183593305
OOCZ01063871
[OOCZ] human gut metagenome; human gut
337
411
+
Sup
CTA
[ENA]
¢þ
>WENV183613340
OODU01003433
[OODU] human gut metagenome; human gut
3456
3530
+
Sup
CTA
[ENA]
¢þ
>WENV183633430
OOIG01000558
[OOIG] human gut metagenome; human gut
25609
25535
-
Sup
CTA
[ENA]
¢þ
>WENV183761240
PPYE01256326
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
6052
6126
+
Sup
CTA
[ENA]
¢þ
>WENV183778829
PPYF01129337
[PPYF] human gut metagenome; stool from patient with Crohn's disease
20517
20443
-
Sup
CTA
[ENA]
¢þ
>WENV183782360
PPYF01218892
[PPYF] human gut metagenome; stool from patient with Crohn's disease
51823
51749
-
Sup
CTA
[ENA]
¢þ
>WENV170076103
CDZT01056096
[CDZT] gut metagenome; human stools
23703
23629
-
Sup
CTA
[ENA]
¢þ
>WENV170077046
CDZU01019668
[CDZU] gut metagenome; human stools
27163
27089
-
Sup
CTA
[ENA]
¢þ
>WENV170078478
CDZV01026756
[CDZV] gut metagenome; human stools
30231
30157
-
Sup
CTA
[ENA]
¢þ
>WENV170090856
CEAF01061743
[CEAF] gut metagenome; human stools
17591
17517
-
Sup
CTA
[ENA]
¢þ
>WENV170091710
CEAG01020760
[CEAG] gut metagenome; human stools
17681
17607
-
Sup
CTA
[ENA]
¢þ
>WENV170094287
CEAH01064093
[CEAH] gut metagenome; human stools
17392
17318
-
Sup
CTA
[ENA]
¢þ
>WENV085103
BABB01003436
Gut microbiome of Human (healthy human sample In-A, Adult, Male)
2346
2420
+
Stop
CTA
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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