tRNA genes clustered and arranged according to each identical group

Haptophyceae

Anticodon = CCA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.459331 (110 seq.)
>WENV180044873 MOXS02051046 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 270 195 - Trp CCA [ENA] ¢þ
>WENV180106918 OAPF01013280 [OAPF] marine metagenome; ENVO:00002010 427 353 - Trp CCA [ENA] ¢þ
>WENV180375027 OBOK01076584 [OBOK] marine metagenome; seawater 185 111 - Trp CCA [ENA] ¢þ
>WENV180375587 OBOL01028406 [OBOL] marine metagenome; Surface water 559 631 + Trp CCA [ENA] ¢þ
>WENV180394877 OBPS01135095 [OBPS] marine metagenome; ENVO:00002010 seawater 117 189 + Trp CCA [ENA] ¢þ
>WENV180641807 OCRN01053940 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 393 321 - Trp CCA [ENA] ¢þ
>WENV180689404 OCZA010876231 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 19 93 + Trp CCA [ENA] ¢þ
>WENV182540373 OJAH01008020 [OJAH] seawater metagenome; Sea water 281 353 + Trp CCA [ENA] ¢þ
>WENV182540568 OJAJ01014978 [OJAJ] seawater metagenome; Sea water 390 462 + Trp CCA [ENA] ¢þ
>WENV182540984 OJAQ01001372 [OJAQ] seawater metagenome; Sea water 1633 1561 - Trp CCA [ENA] ¢þ
>WENV182557289 OJDI01004824 [OJDI] seawater metagenome; Sea water 847 773 - Trp CCA [ENA] ¢þ
>WENV182558388 OJDM01001264 [OJDM] seawater metagenome; Sea water 684 612 - Trp CCA [ENA] ¢þ
>WENV182562056 OJDY01002922 [OJDY] seawater metagenome; Sea water 378 306 - Trp CCA [ENA] ¢þ
>WENV182563314 OJEB01007326 [OJEB] seawater metagenome; Sea water 918 845 - Trp CCA [ENA] ¢þ
>WENV182574903 OJFS01006672 [OJFS] seawater metagenome; Sea water 1542 1616 + Trp CCA [ENA] ¢þ
>WENV182576750 OJFY01005349 [OJFY] seawater metagenome; Sea water 498 570 + Trp CCA [ENA] ¢þ
>WENV182582713 OJHB01018964 [OJHB] seawater metagenome; Sea water 424 496 + Trp CCA [ENA] ¢þ
>WENV182583346 OJHD01005098 [OJHD] seawater metagenome; Sea water 1386 1458 + Trp CCA [ENA] ¢þ
>WENV182589954 OJIG01016435 [OJIG] seawater metagenome; Sea water 92 19 - Trp CCA [ENA] ¢þ
>WENV183060399 OLHX01007791 [OLHX] seawater metagenome; Sea water 554 626 + Trp CCA [ENA] ¢þ
>WENV183699947 OZSS01071167 [OZSS] metagenome; Seawater sample 513 439 - Trp CCA [ENA] ¢þ
>WENV183797897 PVBE010372574 [PVBE] marine metagenome; water 1639 1564 - Trp CCA [ENA] ¢þ
>WENV170151037 CEOC01169635 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2171 2096 - Trp CCA [ENA] ¢þ
>WENV170169651 CEOP01225644 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5538 5463 - Trp CCA [ENA] ¢þ
>WENV170185405 CEOZ01217566 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 866 791 - Trp CCA [ENA] ¢þ
>WENV170190214 CEPC01075790 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 189 114 - Trp CCA [ENA] ¢þ
>WENV170195800 CEPJ01275761 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 745 819 + Trp CCA [ENA] ¢þ
>WENV170205750 CEPT01119637 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3975 3900 - Trp CCA [ENA] ¢þ
>WENV170207535 CEPU01095178 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 905 979 + Trp CCA [ENA] ¢þ
>WENV170235819 CEQL01126083 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 734 662 - Trp CCA [ENA] ¢þ
>WENV170236628 CEQM01000951 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 654 726 + Trp CCA [ENA] ¢þ
>WENV170237692 CEQM01074894 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2799 2874 + Trp CCA [ENA] ¢þ
>WENV170241548 CEQN01346653 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 851 776 - Trp CCA [ENA] ¢þ
>WENV170242565 CEQO01066047 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2802 2876 + Trp CCA [ENA] ¢þ
>WENV170250729 CEQT01014119 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1136 1062 - Trp CCA [ENA] ¢þ
>WENV170252979 CEQU01043187 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2797 2872 + Trp CCA [ENA] ¢þ
>WENV170254645 CEQW01012353 [CEQW] marine metagenome genome assembly TARA_070_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5096 5021 - Trp CCA [ENA] ¢þ
>WENV170267482 CERG01006132 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 318 392 + Trp CCA [ENA] ¢þ
>WENV170267606 CERG01012638 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2421 2347 - Trp CCA [ENA] ¢þ
>WENV170284211 CERV01027709 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2797 2872 + Trp CCA [ENA] ¢þ
>WENV170286474 CERW01098466 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 820 745 - Trp CCA [ENA] ¢þ
>WENV170291873 CESB01001309 [CESB] marine metagenome genome assembly TARA_078_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 405 477 + Trp CCA [ENA] ¢þ
>WENV170304412 CESI01042405 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1842 1770 - Trp CCA [ENA] ¢þ
>WENV170304451 CESI01044586 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 22803 22877 + Trp CCA [ENA] ¢þ
>WENV170326560 CESU01007690 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 395 321 - Trp CCA [ENA] ¢þ
>WENV170327790 CESU01105849 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4017 4091 + Trp CCA [ENA] ¢þ
>WENV170334826 CESZ01010457 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 549 621 + Trp CCA [ENA] ¢þ
>WENV170341468 CETD01010602 [CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5100 5025 - Trp CCA [ENA] ¢þ
>WENV170377227 CETU01143603 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 280 354 + Trp CCA [ENA] ¢þ
>WENV170377524 CETU01163948 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 596 521 - Trp CCA [ENA] ¢þ
>WENV170418045 CEUM01018082 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 180 106 - Trp CCA [ENA] ¢þ
>WENV170418341 CEUM01035008 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2593 2518 - Trp CCA [ENA] ¢þ
>WENV170419256 CEUM01112192 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 341 269 - Trp CCA [ENA] ¢þ
>WENV170439067 CEUV01010382 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 16089 16161 + Trp CCA [ENA] ¢þ
>WENV170439260 CEUV01021408 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1929 1855 - Trp CCA [ENA] ¢þ
>WENV170461039 CEVC01253519 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 622 550 - Trp CCA [ENA] ¢þ
>WENV170485920 CEVN01149765 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 524 + Trp CCA [ENA] ¢þ
>WENV170493842 CEVR01033274 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 181 107 - Trp CCA [ENA] ¢þ
>WENV170499767 CEVT01185887 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5100 5025 - Trp CCA [ENA] ¢þ
>WENV170505551 CEVW01074643 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 225 151 - Trp CCA [ENA] ¢þ
>WENV170510180 CEVY01111048 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1605 1530 - Trp CCA [ENA] ¢þ
>WENV170515186 CEWB01008469 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 173 99 - Trp CCA [ENA] ¢þ
>WENV170515206 CEWB01009743 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 175 101 - Trp CCA [ENA] ¢þ
>WENV170515246 CEWB01011372 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 211 285 + Trp CCA [ENA] ¢þ
>WENV170515276 CEWB01013685 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1915 1841 - Trp CCA [ENA] ¢þ
>WENV170517142 CEWE01013163 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 171 97 - Trp CCA [ENA] ¢þ
>WENV170519225 CEWE01214587 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 339 267 - Trp CCA [ENA] ¢þ
>WENV170529399 CEWJ01129740 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1135 1210 + Trp CCA [ENA] ¢þ
>WENV170532289 CEWO01031590 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3816 3742 - Trp CCA [ENA] ¢þ
>WENV170609131 FUWD011285896 [FUWD] metagenome; unknown 162 88 - Trp CCA [ENA] ¢þ
>WENV170791285 MDSV01080357 [MDSV] marine metagenome; seawater 6154 6226 + Trp CCA [ENA] ¢þ
>WENV170799226 MDSV01209678 [MDSV] marine metagenome; seawater 3208 3283 + Trp CCA [ENA] ¢þ
>WENV170800806 MDSV01236377 [MDSV] marine metagenome; seawater 7819 7892 + Trp CCA [ENA] ¢þ
>WENV170802465 MDSW01013856 [MDSW] marine metagenome; seawater 443 369 - Trp CCA [ENA] ¢þ
>WENV170805453 MDSW01065127 [MDSW] marine metagenome; seawater 9837 9909 + Trp CCA [ENA] ¢þ
>WENV170816970 MDSX01041126 [MDSX] marine metagenome; seawater 213 139 - Trp CCA [ENA] ¢þ
>WENV170817140 MDSX01044385 [MDSX] marine metagenome; seawater 6299 6225 - Trp CCA [ENA] ¢þ
>WENV170817527 MDSX01052390 [MDSX] marine metagenome; seawater 139 65 - Trp CCA [ENA] ¢þ
>WENV170818459 MDSX01072071 [MDSX] marine metagenome; seawater 5297 5371 + Trp CCA [ENA] ¢þ
>WENV170818479 MDSX01072567 [MDSX] marine metagenome; seawater 2368 2295 - Trp CCA [ENA] ¢þ
>WENV170818485 MDSX01072679 [MDSX] marine metagenome; seawater 8514 8442 - Trp CCA [ENA] ¢þ
>WENV170819219 MDSX01088481 [MDSX] marine metagenome; seawater 236 164 - Trp CCA [ENA] ¢þ
>WENV170819423 MDSX01092251 [MDSX] marine metagenome; seawater 6187 6113 - Trp CCA [ENA] ¢þ
>WENV170819500 MDSX01093691 [MDSX] marine metagenome; seawater 13254 13326 + Trp CCA [ENA] ¢þ
>WENV170819613 MDSX01096103 [MDSX] marine metagenome; seawater 3815 3887 + Trp CCA [ENA] ¢þ
>WENV170820177 MDSX01107640 [MDSX] marine metagenome; seawater 6597 6671 + Trp CCA [ENA] ¢þ
>WENV170820494 MDSY01005675 [MDSY] marine metagenome; seawater 17921 17995 + Trp CCA [ENA] ¢þ
>WENV170820546 MDSY01006589 [MDSY] marine metagenome; seawater 5228 5302 + Trp CCA [ENA] ¢þ
>WENV170820913 MDSY01013656 [MDSY] marine metagenome; seawater 2833 2908 + Trp CCA [ENA] ¢þ
>WENV170824688 MDSY01080341 [MDSY] marine metagenome; seawater 850 922 + Trp CCA [ENA] ¢þ
>WENV170828056 MDSY01141993 [MDSY] marine metagenome; seawater 22855 22929 + Trp CCA [ENA] ¢þ
>WENV170828390 MDSY01148922 [MDSY] marine metagenome; seawater 5340 5412 + Trp CCA [ENA] ¢þ
>WENV170832206 MDSZ01057677 [MDSZ] marine metagenome; seawater 41909 41835 - Trp CCA [ENA] ¢þ
>WENV170850597 MDTA01116806 [MDTA] marine metagenome; seawater 169 95 - Trp CCA [ENA] ¢þ
>WENV170854109 MDTA01182886 [MDTA] marine metagenome; seawater 3978 3903 - Trp CCA [ENA] ¢þ
>WENV170862951 MDTB01084449 [MDTB] marine metagenome; seawater 8196 8121 - Trp CCA [ENA] ¢þ
>WENV170880043 MDTC01105387 [MDTC] marine metagenome; seawater 17446 17372 - Trp CCA [ENA] ¢þ
>WENV170888398 MDTC01256886 [MDTC] marine metagenome; seawater 2873 2948 + Trp CCA [ENA] ¢þ
>WENV170890058 MDTD01004164 [MDTD] marine metagenome; seawater 8539 8613 + Trp CCA [ENA] ¢þ
>WENV170890486 MDTD01010625 [MDTD] marine metagenome; seawater 7890 7964 + Trp CCA [ENA] ¢þ
>WENV170895074 MDTD01074714 [MDTD] marine metagenome; seawater 20558 20630 + Trp CCA [ENA] ¢þ
>WENV170896082 MDTD01089872 [MDTD] marine metagenome; seawater 7883 7957 + Trp CCA [ENA] ¢þ
>WENV170902807 MDTD01191747 [MDTD] marine metagenome; seawater 91 17 - Trp CCA [ENA] ¢þ
>WENV170907110 MDTE01047891 [MDTE] marine metagenome; seawater 2884 2959 + Trp CCA [ENA] ¢þ
>WENV170914539 MDTE01149785 [MDTE] marine metagenome; seawater 4753 4827 + Trp CCA [ENA] ¢þ
>WENV170923037 MDTG01041827 [MDTG] marine metagenome; seawater 20 95 + Trp CCA [ENA] ¢þ
>WENV170927568 MDTG01119416 [MDTG] marine metagenome; seawater 4481 4555 + Trp CCA [ENA] ¢þ
>WENV170929053 MDTG01144212 [MDTG] marine metagenome; seawater 3268 3342 + Trp CCA [ENA] ¢þ
>WENV170931141 MDTG01179423 [MDTG] marine metagenome; seawater 3376 3304 - Trp CCA [ENA] ¢þ
>CHL090101612 AY741371 Haptophyceae Emiliania huxleyi 47488 47414 - Trp CCA [ENA] ¡û
Identical group No.475573 (13 seq.)
>WENV180367633 OBOE01186483 [OBOE] marine metagenome; ENVO:00002010 7 79 + Trp CCA [ENA] ¢þ
>WENV180590292 OCOT01000022 [OCOT] marine metagenome; ENVO:00002010 6057 6129 + Trp CCA [ENA] ¢þ
>WENV181092753 OEBK01048184 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 442 370 - Trp CCA [ENA] ¢þ
>WENV182566472 OJEL01001187 [OJEL] seawater metagenome; Sea water 1535 1463 - Trp CCA [ENA] ¢þ
>WENV183053784 OLGR01000032 [OLGR] seawater metagenome; Sea water 6572 6500 - Trp CCA [ENA] ¢þ
>WENV183055603 OLHD01005478 [OLHD] seawater metagenome; Sea water 328 400 + Trp CCA [ENA] ¢þ
>WENV183059849 OLHW01000017 [OLHW] seawater metagenome; Sea water 13132 13060 - Trp CCA [ENA] ¢þ
>WENV170275206 CERM01073626 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8109 8037 - Trp CCA [ENA] ¢þ
>WENV170326629 CESU01011140 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4310 4238 - Trp CCA [ENA] ¢þ
>WENV170532239 CEWO01027300 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 182 110 - Trp CCA [ENA] ¢þ
>WENV170813531 MDSW01201563 [MDSW] marine metagenome; seawater 468 396 - Trp CCA [ENA] ¢þ
>WENV170947708 MEHZ010894197 [MEHZ] marine metagenome; marine surface water 439 511 + Trp CCA [ENA] ¢þ
>CHL1810009323 KC900889 Haptophyceae Phaeocystis globosa (KC900889) 52599 52527 - Trp CCA [ENA] ¡û
Identical group No.627291 (1 seq.)
>CHL1810008579 KC573041 Haptophyceae Pavlova lutheri ATCC 50092 (KC573041) 46018 45946 - Trp CCA [ENA] ¡û
Identical group No.646357 (1 seq.)
>CHL1810057804 MG520331 Haptophyceae Chrysochromulina parva (MG520331) 92779 92853 + Trp CCA [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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