tRNA genes clustered and arranged according to each identical group

Haptophyceae

Anticodon = GCA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.760754 (1 seq.)
>CHL1810008564 KC573041 Haptophyceae Pavlova lutheri ATCC 50092 (KC573041) 61892 61963 + Cys GCA [ENA] ¡û
Identical group No.781318 (100 seq.)
>W131220569 ATZN01000131 Unclassified Proteobacteria bacterium JGI 0000113-L05 [ATZN] 9392 9320 - Cys GCA [ENA] ¡û
>WENV180047734 MPLT02261403 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 386 458 + Cys GCA [ENA] ¢þ
>WENV180115346 OAPS01217340 [OAPS] marine metagenome; sea water 187 257 + Cys GCA [ENA] ¢þ
>WENV180381758 OBOS01017535 [OBOS] marine metagenome; ENVO 00002150 443 371 - Cys GCA [ENA] ¢þ
>WENV180393851 OBPR01015452 [OBPR] marine metagenome; ENVO:00002042 57 129 + Cys GCA [ENA] ¢þ
>WENV180641773 OCRN01042800 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 294 224 - Cys GCA [ENA] ¢þ
>WENV182540982 OJAQ01001372 [OJAQ] seawater metagenome; Sea water 1185 1257 + Cys GCA [ENA] ¢þ
>WENV182557207 OJDI01002133 [OJDI] seawater metagenome; Sea water 4083 4011 - Cys GCA [ENA] ¢þ
>WENV182558386 OJDM01001264 [OJDM] seawater metagenome; Sea water 307 379 + Cys GCA [ENA] ¢þ
>WENV182561829 OJDX01009708 [OJDX] seawater metagenome; Sea water 246 174 - Cys GCA [ENA] ¢þ
>WENV182562114 OJDY01010560 [OJDY] seawater metagenome; Sea water 661 733 + Cys GCA [ENA] ¢þ
>WENV182566354 OJEL01000020 [OJEL] seawater metagenome; Sea water 1576 1648 + Cys GCA [ENA] ¢þ
>WENV182574041 OJFQ01012323 [OJFQ] seawater metagenome; Sea water 561 489 - Cys GCA [ENA] ¢þ
>WENV182576752 OJFY01005349 [OJFY] seawater metagenome; Sea water 946 874 - Cys GCA [ENA] ¢þ
>WENV182590341 OJIH01026532 [OJIH] seawater metagenome; Sea water 42 114 + Cys GCA [ENA] ¢þ
>WENV183053801 OLGR01000081 [OLGR] seawater metagenome; Sea water 3961 3889 - Cys GCA [ENA] ¢þ
>WENV183054342 OLGT01001229 [OLGT] seawater metagenome; Sea water 234 162 - Cys GCA [ENA] ¢þ
>WENV183059122 OLHS01005595 [OLHS] seawater metagenome; Sea water 413 341 - Cys GCA [ENA] ¢þ
>WENV183059448 OLHU01006059 [OLHU] seawater metagenome; Sea water 940 1012 + Cys GCA [ENA] ¢þ
>WENV183060009 OLHW01003871 [OLHW] seawater metagenome; Sea water 669 597 - Cys GCA [ENA] ¢þ
>WENV183806027 PVBE011077571 [PVBE] marine metagenome; water 200 128 - Cys GCA [ENA] ¢þ
>WENV170208392 CEPU01275350 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 749 821 + Cys GCA [ENA] ¢þ
>WENV170233374 CEQJ01019943 [CEQJ] marine metagenome genome assembly TARA_076_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 241 169 - Cys GCA [ENA] ¢þ
>WENV170235817 CEQL01126083 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 279 351 + Cys GCA [ENA] ¢þ
>WENV170242790 CEQO01084748 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 163 235 + Cys GCA [ENA] ¢þ
>WENV170268029 CERG01040783 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 293 365 + Cys GCA [ENA] ¢þ
>WENV170279815 CERR01057875 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 123 195 + Cys GCA [ENA] ¢þ
>WENV170288422 CERX01093136 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 319 391 + Cys GCA [ENA] ¢þ
>WENV170291885 CESB01001309 [CESB] marine metagenome genome assembly TARA_078_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 860 788 - Cys GCA [ENA] ¢þ
>WENV170303905 CESI01002863 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 398 326 - Cys GCA [ENA] ¢þ
>WENV170306909 CESJ01087525 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7102 7174 + Cys GCA [ENA] ¢þ
>WENV170307001 CESJ01103562 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 217 289 + Cys GCA [ENA] ¢þ
>WENV170326921 CESU01031837 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1950 2022 + Cys GCA [ENA] ¢þ
>WENV170334830 CESZ01010457 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1004 932 - Cys GCA [ENA] ¢þ
>WENV170345138 CETE01200332 [CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 440 368 - Cys GCA [ENA] ¢þ
>WENV170346851 CETG01075993 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 380 308 - Cys GCA [ENA] ¢þ
>WENV170357183 CETJ01115987 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 114 186 + Cys GCA [ENA] ¢þ
>WENV170357998 CETK01041704 [CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1455 1383 - Cys GCA [ENA] ¢þ
>WENV170389902 CEUA01053044 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 310 238 - Cys GCA [ENA] ¢þ
>WENV170402269 CEUE01350350 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 163 235 + Cys GCA [ENA] ¢þ
>WENV170407028 CEUH01087712 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2881 2953 + Cys GCA [ENA] ¢þ
>WENV170418781 CEUM01066734 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 556 484 - Cys GCA [ENA] ¢þ
>WENV170424693 CEUP01003610 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 115 187 + Cys GCA [ENA] ¢þ
>WENV170443404 CEUW01195802 [CEUW] marine metagenome genome assembly TARA_122_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 490 562 + Cys GCA [ENA] ¢þ
>WENV170460464 CEVC01155221 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4328 4400 + Cys GCA [ENA] ¢þ
>WENV170501403 CEVU01115064 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 163 235 + Cys GCA [ENA] ¢þ
>WENV170503497 CEVV01098080 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 326 398 + Cys GCA [ENA] ¢þ
>WENV170515819 CEWB01054920 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 521 593 + Cys GCA [ENA] ¢þ
>WENV170516275 CEWB01093712 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 364 436 + Cys GCA [ENA] ¢þ
>WENV170523397 CEWG01202449 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 315 387 + Cys GCA [ENA] ¢þ
>WENV170532087 CEWO01018576 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2624 2696 + Cys GCA [ENA] ¢þ
>WENV170538293 CEWR01067250 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2740 2812 + Cys GCA [ENA] ¢þ
>WENV170595524 FUFK011835670 [FUFK] metagenome; unknown 88 160 + Cys GCA [ENA] ¢þ
>WENV170605976 FUWD010578639 [FUWD] metagenome; unknown 181 109 - Cys GCA [ENA] ¢þ
>WENV170623169 FUWD013139413 [FUWD] metagenome; unknown 389 461 + Cys GCA [ENA] ¢þ
>WENV170631425 FUWD013351670 [FUWD] metagenome; unknown 389 461 + Cys GCA [ENA] ¢þ
>WENV170788301 MDSV01031207 [MDSV] marine metagenome; seawater 1783 1711 - Cys GCA [ENA] ¢þ
>WENV170800241 MDSV01226893 [MDSV] marine metagenome; seawater 77 5 - Cys GCA [ENA] ¢þ
>WENV170801350 MDSV01245388 [MDSV] marine metagenome; seawater 2276 2348 + Cys GCA [ENA] ¢þ
>WENV170806024 MDSW01075167 [MDSW] marine metagenome; seawater 455 383 - Cys GCA [ENA] ¢þ
>WENV170806636 MDSW01084823 [MDSW] marine metagenome; seawater 11028 11100 + Cys GCA [ENA] ¢þ
>WENV170813527 MDSW01201530 [MDSW] marine metagenome; seawater 4368 4440 + Cys GCA [ENA] ¢þ
>WENV170816111 MDSX01023863 [MDSX] marine metagenome; seawater 1377 1305 - Cys GCA [ENA] ¢þ
>WENV170816710 MDSX01035311 [MDSX] marine metagenome; seawater 7917 7989 + Cys GCA [ENA] ¢þ
>WENV170817503 MDSX01051800 [MDSX] marine metagenome; seawater 1500 1572 + Cys GCA [ENA] ¢þ
>WENV170817762 MDSX01056585 [MDSX] marine metagenome; seawater 140 68 - Cys GCA [ENA] ¢þ
>WENV170818236 MDSX01066679 [MDSX] marine metagenome; seawater 1936 2008 + Cys GCA [ENA] ¢þ
>WENV170818452 MDSX01072005 [MDSX] marine metagenome; seawater 825 897 + Cys GCA [ENA] ¢þ
>WENV170819241 MDSX01088687 [MDSX] marine metagenome; seawater 98 26 - Cys GCA [ENA] ¢þ
>WENV170819307 MDSX01090184 [MDSX] marine metagenome; seawater 3110 3038 - Cys GCA [ENA] ¢þ
>WENV170820025 MDSX01104418 [MDSX] marine metagenome; seawater 2775 2847 + Cys GCA [ENA] ¢þ
>WENV170820150 MDSX01107094 [MDSX] marine metagenome; seawater 10413 10341 - Cys GCA [ENA] ¢þ
>WENV170820497 MDSY01005675 [MDSY] marine metagenome; seawater 23201 23273 + Cys GCA [ENA] ¢þ
>WENV170821820 MDSY01028836 [MDSY] marine metagenome; seawater 2756 2828 + Cys GCA [ENA] ¢þ
>WENV170822579 MDSY01042752 [MDSY] marine metagenome; seawater 2195 2267 + Cys GCA [ENA] ¢þ
>WENV170823516 MDSY01059065 [MDSY] marine metagenome; seawater 3373 3301 - Cys GCA [ENA] ¢þ
>WENV170824592 MDSY01078606 [MDSY] marine metagenome; seawater 368 296 - Cys GCA [ENA] ¢þ
>WENV170824616 MDSY01078996 [MDSY] marine metagenome; seawater 2042 1970 - Cys GCA [ENA] ¢þ
>WENV170826068 MDSY01104906 [MDSY] marine metagenome; seawater 4663 4591 - Cys GCA [ENA] ¢þ
>WENV170826591 MDSY01113176 [MDSY] marine metagenome; seawater 87 15 - Cys GCA [ENA] ¢þ
>WENV170828666 MDSY01154170 [MDSY] marine metagenome; seawater 1381 1453 + Cys GCA [ENA] ¢þ
>WENV170832211 MDSZ01057677 [MDSZ] marine metagenome; seawater 14440 14368 - Cys GCA [ENA] ¢þ
>WENV170847138 MDTA01054928 [MDTA] marine metagenome; seawater 1276 1204 - Cys GCA [ENA] ¢þ
>WENV170848392 MDTA01078243 [MDTA] marine metagenome; seawater 2743 2671 - Cys GCA [ENA] ¢þ
>WENV170851091 MDTA01126048 [MDTA] marine metagenome; seawater 3942 3870 - Cys GCA [ENA] ¢þ
>WENV170878900 MDTC01085881 [MDTC] marine metagenome; seawater 3973 3901 - Cys GCA [ENA] ¢þ
>WENV170881471 MDTC01131630 [MDTC] marine metagenome; seawater 7396 7324 - Cys GCA [ENA] ¢þ
>WENV170892229 MDTD01035545 [MDTD] marine metagenome; seawater 308 236 - Cys GCA [ENA] ¢þ
>WENV170895077 MDTD01074714 [MDTD] marine metagenome; seawater 4514 4442 - Cys GCA [ENA] ¢þ
>WENV170897774 MDTD01117082 [MDTD] marine metagenome; seawater 10 82 + Cys GCA [ENA] ¢þ
>WENV170898505 MDTD01127311 [MDTD] marine metagenome; seawater 11898 11826 - Cys GCA [ENA] ¢þ
>WENV170899426 MDTD01139623 [MDTD] marine metagenome; seawater 3315 3387 + Cys GCA [ENA] ¢þ
>WENV170902545 MDTD01187085 [MDTD] marine metagenome; seawater 1137 1065 - Cys GCA [ENA] ¢þ
>WENV170909156 MDTE01074451 [MDTE] marine metagenome; seawater 75 3 - Cys GCA [ENA] ¢þ
>WENV170916682 MDTE01181861 [MDTE] marine metagenome; seawater 1639 1567 - Cys GCA [ENA] ¢þ
>WENV170920185 MDTF01015692 [MDTF] marine metagenome; seawater 11064 10992 - Cys GCA [ENA] ¢þ
>WENV170938529 MDTG01310371 [MDTG] marine metagenome; seawater 888 815 - Cys GCA [ENA] ¢þ
>WENV170948117 MEHZ011087526 [MEHZ] marine metagenome; marine surface water 171 99 - Cys GCA [ENA] ¢þ
>CHL1810009320 KC900889 Haptophyceae Phaeocystis globosa (KC900889) 63173 63101 - Cys GCA [ENA] ¡û
>CHL090101615 AY741371 Haptophyceae Emiliania huxleyi 42207 42135 - Cys GCA [ENA] ¡û
Identical group No.835243 (1 seq.)
>CHL1810057800 MG520331 Haptophyceae Chrysochromulina parva (MG520331) 83472 83544 + Cys GCA [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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