tRNA genes clustered and arranged according to each identical group

Haptophyceae

Anticodon = GTT

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.657427 (52 seq.)
>WENV180586428 OCOM01079224 [OCOM] marine metagenome; seawater 369 298 - Asn GTT [ENA] ¢þ
>WENV180589006 OCOQ01053951 [OCOQ] marine metagenome; ENVO:00002010 344 273 - Asn GTT [ENA] ¢þ
>WENV182570181 OJFB01027841 [OJFB] seawater metagenome; Sea water 501 430 - Asn GTT [ENA] ¢þ
>WENV182592653 OJIR01007399 [OJIR] seawater metagenome; Sea water 579 506 - Asn GTT [ENA] ¢þ
>WENV183059129 OLHS01006592 [OLHS] seawater metagenome; Sea water 243 170 - Asn GTT [ENA] ¢þ
>WENV183699193 OZSS01015435 [OZSS] metagenome; Seawater sample 2398 2327 - Asn GTT [ENA] ¢þ
>WENV170184838 CEOZ01147294 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 186 259 + Asn GTT [ENA] ¢þ
>WENV170268386 CERG01080019 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9003 8932 - Asn GTT [ENA] ¢þ
>WENV170274477 CERM01019440 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 116 187 + Asn GTT [ENA] ¢þ
>WENV170282129 CERS01143579 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 224 295 + Asn GTT [ENA] ¢þ
>WENV170285071 CERV01119422 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1011 940 - Asn GTT [ENA] ¢þ
>WENV170320275 CESQ01285386 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 272 + Asn GTT [ENA] ¢þ
>WENV170332506 CESW01194350 [CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 602 529 - Asn GTT [ENA] ¢þ
>WENV170355117 CETI01211202 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 374 303 - Asn GTT [ENA] ¢þ
>WENV170391003 CEUA01188075 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3070 2999 - Asn GTT [ENA] ¢þ
>WENV170439958 CEUV01060804 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 132 203 + Asn GTT [ENA] ¢þ
>WENV170440024 CEUV01065520 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2285 2212 - Asn GTT [ENA] ¢þ
>WENV170440754 CEUV01126635 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2374 2445 + Asn GTT [ENA] ¢þ
>WENV170480707 CEVL01130295 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 212 285 + Asn GTT [ENA] ¢þ
>WENV170485290 CEVN01093689 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2443 2516 + Asn GTT [ENA] ¢þ
>WENV170504064 CEVV01163718 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1658 1729 + Asn GTT [ENA] ¢þ
>WENV170508387 CEVX01160088 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2810 2739 - Asn GTT [ENA] ¢þ
>WENV170515239 CEWB01011183 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 433 506 + Asn GTT [ENA] ¢þ
>WENV170515507 CEWB01030197 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 383 310 - Asn GTT [ENA] ¢þ
>WENV170515523 CEWB01031232 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 857 784 - Asn GTT [ENA] ¢þ
>WENV170515805 CEWB01053877 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 671 600 - Asn GTT [ENA] ¢þ
>WENV170515811 CEWB01054440 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4892 4963 + Asn GTT [ENA] ¢þ
>WENV170594268 FUFK011256473 [FUFK] metagenome; unknown 139 66 - Asn GTT [ENA] ¢þ
>WENV170603862 FUWD010340348 [FUWD] metagenome; unknown 94 21 - Asn GTT [ENA] ¢þ
>WENV170799190 MDSV01209120 [MDSV] marine metagenome; seawater 4209 4138 - Asn GTT [ENA] ¢þ
>WENV170800805 MDSV01236377 [MDSV] marine metagenome; seawater 2431 2502 + Asn GTT [ENA] ¢þ
>WENV170811237 MDSW01163141 [MDSW] marine metagenome; seawater 13378 13305 - Asn GTT [ENA] ¢þ
>WENV170813362 MDSW01198716 [MDSW] marine metagenome; seawater 1893 1966 + Asn GTT [ENA] ¢þ
>WENV170815153 MDSX01005619 [MDSX] marine metagenome; seawater 1713 1784 + Asn GTT [ENA] ¢þ
>WENV170815646 MDSX01014059 [MDSX] marine metagenome; seawater 2155 2226 + Asn GTT [ENA] ¢þ
>WENV170816713 MDSX01035311 [MDSX] marine metagenome; seawater 11522 11593 + Asn GTT [ENA] ¢þ
>WENV170816956 MDSX01041060 [MDSX] marine metagenome; seawater 835 908 + Asn GTT [ENA] ¢þ
>WENV170816969 MDSX01041126 [MDSX] marine metagenome; seawater 5600 5529 - Asn GTT [ENA] ¢þ
>WENV170817068 MDSX01043277 [MDSX] marine metagenome; seawater 1168 1095 - Asn GTT [ENA] ¢þ
>WENV170817660 MDSX01054835 [MDSX] marine metagenome; seawater 1819 1892 + Asn GTT [ENA] ¢þ
>WENV170818409 MDSX01070645 [MDSX] marine metagenome; seawater 2846 2773 - Asn GTT [ENA] ¢þ
>WENV170818583 MDSX01074670 [MDSX] marine metagenome; seawater 6763 6692 - Asn GTT [ENA] ¢þ
>WENV170820176 MDSX01107640 [MDSX] marine metagenome; seawater 625 698 + Asn GTT [ENA] ¢þ
>WENV170820348 MDSY01003069 [MDSY] marine metagenome; seawater 8947 8874 - Asn GTT [ENA] ¢þ
>WENV170851094 MDTA01126048 [MDTA] marine metagenome; seawater 228 155 - Asn GTT [ENA] ¢þ
>WENV170890485 MDTD01010625 [MDTD] marine metagenome; seawater 2458 2529 + Asn GTT [ENA] ¢þ
>WENV170891982 MDTD01032216 [MDTD] marine metagenome; seawater 1767 1840 + Asn GTT [ENA] ¢þ
>WENV170896081 MDTD01089872 [MDTD] marine metagenome; seawater 1899 1972 + Asn GTT [ENA] ¢þ
>WENV170898508 MDTD01127311 [MDTD] marine metagenome; seawater 8293 8222 - Asn GTT [ENA] ¢þ
>WENV170932158 MDTG01197906 [MDTG] marine metagenome; seawater 465 394 - Asn GTT [ENA] ¢þ
>CHL090101618 AY741371 Haptophyceae Emiliania huxleyi 38731 38658 - Asn GTT [ENA] ¡û
>WENV003542 AACY020096845 Marine microbial communities from Global Ocean Sampling (GOS) 942 868 - Asn GTT [ENA]
Identical group No.657627 (25 seq.)
>WENV180376053 OBOL01192375 [OBOL] marine metagenome; Surface water 53 124 + Asn GTT [ENA] ¢þ
>WENV180589333 OCOR01032479 [OCOR] marine metagenome; ENVO:00002042 144 73 - Asn GTT [ENA] ¢þ
>WENV170233668 CEQJ01052680 [CEQJ] marine metagenome genome assembly TARA_076_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 272 201 - Asn GTT [ENA] ¢þ
>WENV170251258 CEQT01075467 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3249 3320 + Asn GTT [ENA] ¢þ
>WENV170267761 CERG01023859 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 583 512 - Asn GTT [ENA] ¢þ
>WENV170307147 CESJ01125041 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 389 316 - Asn GTT [ENA] ¢þ
>WENV170307229 CESJ01133723 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 432 503 + Asn GTT [ENA] ¢þ
>WENV170317104 CESP01116113 [CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 309 380 + Asn GTT [ENA] ¢þ
>WENV170327659 CESU01099357 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1755 1684 - Asn GTT [ENA] ¢þ
>WENV170359197 CETK01258093 [CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 160 231 + Asn GTT [ENA] ¢þ
>WENV170368548 CETQ01072955 [CETQ] marine metagenome genome assembly TARA_110_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 181 252 + Asn GTT [ENA] ¢þ
>WENV170407303 CEUH01125303 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 466 537 + Asn GTT [ENA] ¢þ
>WENV170439272 CEUV01022368 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2170 2241 + Asn GTT [ENA] ¢þ
>WENV170440056 CEUV01066722 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 137 208 + Asn GTT [ENA] ¢þ
>WENV170468507 CEVF01038508 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 316 245 - Asn GTT [ENA] ¢þ
>WENV170792713 MDSV01103937 [MDSV] marine metagenome; seawater 259 330 + Asn GTT [ENA] ¢þ
>WENV170805452 MDSW01065127 [MDSW] marine metagenome; seawater 4036 4109 + Asn GTT [ENA] ¢þ
>WENV170817462 MDSX01050885 [MDSX] marine metagenome; seawater 2989 3060 + Asn GTT [ENA] ¢þ
>WENV170822058 MDSY01033311 [MDSY] marine metagenome; seawater 3781 3852 + Asn GTT [ENA] ¢þ
>WENV170823866 MDSY01065567 [MDSY] marine metagenome; seawater 646 575 - Asn GTT [ENA] ¢þ
>WENV170826823 MDSY01117459 [MDSY] marine metagenome; seawater 9736 9665 - Asn GTT [ENA] ¢þ
>WENV170871810 MDTB01210767 [MDTB] marine metagenome; seawater 296 367 + Asn GTT [ENA] ¢þ
>WENV170903034 MDTD01195755 [MDTD] marine metagenome; seawater 263 334 + Asn GTT [ENA] ¢þ
>CHL1810057803 MG520331 Haptophyceae Chrysochromulina parva (MG520331) 87367 87440 + Asn GTT [ENA] ¡û
>WENV064538 AACY023547503 Marine microbial communities from Global Ocean Sampling (GOS) 200 274 + Asn GTT [ENA]
Identical group No.662109 (32 seq.)
>WENV180104162 OAPB01101581 [OAPB] marine metagenome; Sterile flask 186 115 - Asn GTT [ENA] ¢þ
>WENV180109105 OAPJ01007450 [OAPJ] marine metagenome; ENVO 00002150 637 566 - Asn GTT [ENA] ¢þ
>WENV180113556 OAPR01000098 [OAPR] marine metagenome; seawater 3678 3607 - Asn GTT [ENA] ¢þ
>WENV180367088 OBOE01009372 [OBOE] marine metagenome; ENVO:00002010 437 364 - Asn GTT [ENA] ¢þ
>WENV180368050 OBOF01020083 [OBOF] marine metagenome; ENVO:00002010 239 310 + Asn GTT [ENA] ¢þ
>WENV180375367 OBOL01004788 [OBOL] marine metagenome; Surface water 395 466 + Asn GTT [ENA] ¢þ
>WENV180383464 OBOU01100599 [OBOU] marine metagenome; ENV:00002010 362 291 - Asn GTT [ENA] ¢þ
>WENV180595746 OCPF01023460 [OCPF] marine metagenome; ENVO.00002150 136 207 + Asn GTT [ENA] ¢þ
>WENV183620504 OOFS01000257 [OOFS] marine metagenome; sea ice 593 664 + Asn GTT [ENA] ¢þ
>WENV183621822 OOFV01000001 [OOFV] marine metagenome; seawater 574 645 + Asn GTT [ENA] ¢þ
>WENV170306249 CESJ01016178 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 797 872 + Asn GTT [ENA] ¢þ
>WENV170307137 CESJ01123885 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 308 379 + Asn GTT [ENA] ¢þ
>WENV170505876 CEVW01112335 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 307 236 - Asn GTT [ENA] ¢þ
>WENV170533883 CEWO01171506 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1503 1432 - Asn GTT [ENA] ¢þ
>WENV170568872 FLMP01089672 [FLMP] seawater metagenome; seawater 59 130 + Asn GTT [ENA] ¢þ
>WENV170570269 FLMP01493152 [FLMP] seawater metagenome; seawater 75 4 - Asn GTT [ENA] ¢þ
>WENV170809197 MDSW01127939 [MDSW] marine metagenome; seawater 6089 6018 - Asn GTT [ENA] ¢þ
>CHL1810000737 AP017927 Viridiplantae Palmophyllum crassum (AP017927) 15153 15224 + Asn GTT [ENA] ¡û
>CHL1810002147 FP102296 Stramenopiles Ectocarpus siliculosus (FP102296) 8616 8688 + Asn GTT [ENA] ¡û
>CHL1810005433 JQ405663 Stramenopiles Saccharina japonica (JQ405663) 120563 120635 + Asn GTT [ENA] ¡û
>CHL1810008367 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 71862 71791 - Asn GTT [ENA] ¡û
>CHL1810008418 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 99119 99048 - Asn GTT [ENA] ¡û
>CHL1810008576 KC573041 Haptophyceae Pavlova lutheri ATCC 50092 (KC573041) 72651 72579 - Asn GTT [ENA] ¡û
>CHL1810013627 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 98055 97984 - Asn GTT [ENA] ¡û
>CHL1810013710 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 111109 111038 - Asn GTT [ENA] ¡û
>CHL1810017334 KP298002 Stramenopiles Undaria pinnatifida (KP298002) 120522 120594 + Asn GTT [ENA] ¡û
>CHL1810019013 KR336545 Stramenopiles Costaria costata (KR336545) 120233 120305 + Asn GTT [ENA] ¡û
>CHL1810024307 KU164871 Stramenopiles Pleurocladia lacustris Sa2 (KU164871) 130732 130660 - Asn GTT [ENA] ¡û
>CHL1810059288 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 72924 72853 - Asn GTT [ENA] ¡û
>CHL1810059311 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 125917 125846 - Asn GTT [ENA] ¡û
>CHL1810059393 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 106246 106175 - Asn GTT [ENA] ¡û
>CHL090103353 Z67753 stramenopiles Odontella sinensis 9852 9923 + Asn GTT [ENA] ¡û
Identical group No.666861 (10 seq.)
>WENV180587671 OCOO01026404 [OCOO] marine metagenome; seawater 356 283 - Asn GTT [ENA] ¢þ
>WENV182566356 OJEL01000020 [OJEL] seawater metagenome; Sea water 5901 5975 + Asn GTT [ENA] ¢þ
>WENV183053783 OLGR01000032 [OLGR] seawater metagenome; Sea water 12825 12751 - Asn GTT [ENA] ¢þ
>WENV183055625 OLHD01008158 [OLHD] seawater metagenome; Sea water 408 482 + Asn GTT [ENA] ¢þ
>WENV183059973 OLHW01001540 [OLHW] seawater metagenome; Sea water 146 72 - Asn GTT [ENA] ¢þ
>WENV170274292 CERM01008538 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2093 2019 - Asn GTT [ENA] ¢þ
>WENV170516081 CEWB01080002 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 310 237 - Asn GTT [ENA] ¢þ
>WENV170533464 CEWO01132159 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 179 253 + Asn GTT [ENA] ¢þ
>WENV170816576 MDSX01032809 [MDSX] marine metagenome; seawater 5759 5832 + Asn GTT [ENA] ¢þ
>CHL1810009322 KC900889 Haptophyceae Phaeocystis globosa (KC900889) 58852 58778 - Asn GTT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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