tRNA genes clustered and arranged according to each identical group

Haptophyceae

Anticodon = TAG

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.154551 (16 seq.)
>WENV180375899 OBOL01117158 [OBOL] marine metagenome; Surface water 328 411 + Leu TAG [ENA] ¢þ
>WENV182541092 OJAQ01010032 [OJAQ] seawater metagenome; Sea water 437 354 - Leu TAG [ENA] ¢þ
>WENV182557206 OJDI01002133 [OJDI] seawater metagenome; Sea water 3340 3423 + Leu TAG [ENA] ¢þ
>WENV182574833 OJFS01003128 [OJFS] seawater metagenome; Sea water 2833 2916 + Leu TAG [ENA] ¢þ
>WENV182592632 OJIR01006180 [OJIR] seawater metagenome; Sea water 521 438 - Leu TAG [ENA] ¢þ
>WENV170232100 CEQI01023800 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 19936 20018 + Leu TAG [ENA] ¢þ
>WENV170235217 CEQL01056280 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20100 20182 + Leu TAG [ENA] ¢þ
>WENV170251259 CEQT01075467 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 207 125 - Leu TAG [ENA] ¢þ
>WENV170291150 CESA01092137 [CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 296 378 + Leu TAG [ENA] ¢þ
>WENV170291882 CESB01001309 [CESB] marine metagenome genome assembly TARA_078_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 18453 18371 - Leu TAG [ENA] ¢þ
>WENV170300956 CESG01225064 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 280 198 - Leu TAG [ENA] ¢þ
>WENV170335706 CESZ01091007 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 601 683 + Leu TAG [ENA] ¢þ
>WENV170822059 MDSY01033311 [MDSY] marine metagenome; seawater 739 657 - Leu TAG [ENA] ¢þ
>WENV170823515 MDSY01059065 [MDSY] marine metagenome; seawater 2621 2704 + Leu TAG [ENA] ¢þ
>WENV170824022 MDSY01068778 [MDSY] marine metagenome; seawater 4496 4414 - Leu TAG [ENA] ¢þ
>CHL090101598 AY741371 Haptophyceae Emiliania huxleyi 41464 41547 + Leu TAG [ENA] ¡û
Identical group No.154580 (9 seq.)
>WENV170254884 CEQW01032220 [CEQW] marine metagenome genome assembly TARA_070_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 652 570 - Leu TAG [ENA] ¢þ
>WENV170305395 CESI01142611 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 372 456 + Leu TAG [ENA] ¢þ
>WENV170327583 CESU01095154 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 354 438 + Leu TAG [ENA] ¢þ
>WENV170439701 CEUV01047863 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8522 8606 + Leu TAG [ENA] ¢þ
>WENV170823672 MDSY01061613 [MDSY] marine metagenome; seawater 847 929 + Leu TAG [ENA] ¢þ
>WENV170828125 MDSY01143531 [MDSY] marine metagenome; seawater 2385 2467 + Leu TAG [ENA] ¢þ
>WENV170828668 MDSY01154170 [MDSY] marine metagenome; seawater 2484 2400 - Leu TAG [ENA] ¢þ
>WENV170897778 MDTD01117082 [MDTD] marine metagenome; seawater 965 881 - Leu TAG [ENA] ¢þ
>CHL1810057808 MG520331 Haptophyceae Chrysochromulina parva (MG520331) 84349 84267 - Leu TAG [ENA] ¡û
Identical group No.176219 (1 seq.)
>CHL1810008586 KC573041 Haptophyceae Pavlova lutheri ATCC 50092 (KC573041) 19498 19416 - Leu TAG [ENA] ¡û
Identical group No.184989 (35 seq.)
>WENV180590361 OCOT01002227 [OCOT] marine metagenome; ENVO:00002010 387 304 - Leu TAG [ENA] ¢þ
>WENV182566358 OJEL01000020 [OJEL] seawater metagenome; Sea water 2441 2358 - Leu TAG [ENA] ¢þ
>WENV183053799 OLGR01000081 [OLGR] seawater metagenome; Sea water 3100 3183 + Leu TAG [ENA] ¢þ
>WENV170189245 CEPB01142104 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 325 242 - Leu TAG [ENA] ¢þ
>WENV170256892 CEQX01140811 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 997 1080 + Leu TAG [ENA] ¢þ
>WENV170267584 CERG01011361 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 547 630 + Leu TAG [ENA] ¢þ
>WENV170274289 CERM01008538 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5541 5624 + Leu TAG [ENA] ¢þ
>WENV170279533 CERR01030661 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 324 241 - Leu TAG [ENA] ¢þ
>WENV170284641 CERV01070449 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 155 238 + Leu TAG [ENA] ¢þ
>WENV170286508 CERW01102306 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 730 647 - Leu TAG [ENA] ¢þ
>WENV170288424 CERX01093136 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1155 1072 - Leu TAG [ENA] ¢þ
>WENV170296594 CESE01026090 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 490 407 - Leu TAG [ENA] ¢þ
>WENV170296699 CESE01038366 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 195 112 - Leu TAG [ENA] ¢þ
>WENV170304846 CESI01084231 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 234 151 - Leu TAG [ENA] ¢þ
>WENV170306471 CESJ01035204 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 195 112 - Leu TAG [ENA] ¢þ
>WENV170325286 CEST01008668 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 739 656 - Leu TAG [ENA] ¢þ
>WENV170325481 CEST01023151 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 197 114 - Leu TAG [ENA] ¢þ
>WENV170326875 CESU01027809 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 198 114 - Leu TAG [ENA] ¢þ
>WENV170326923 CESU01031837 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2265 2182 - Leu TAG [ENA] ¢þ
>WENV170368522 CETQ01068799 [CETQ] marine metagenome genome assembly TARA_110_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 360 277 - Leu TAG [ENA] ¢þ
>WENV170386569 CETY01182617 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 274 357 + Leu TAG [ENA] ¢þ
>WENV170391239 CEUA01214938 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 466 549 + Leu TAG [ENA] ¢þ
>WENV170393787 CEUB01294422 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 527 444 - Leu TAG [ENA] ¢þ
>WENV170401447 CEUE01235112 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 297 214 - Leu TAG [ENA] ¢þ
>WENV170413600 CEUK01124692 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 108 25 - Leu TAG [ENA] ¢þ
>WENV170460466 CEVC01155221 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5161 5078 - Leu TAG [ENA] ¢þ
>WENV170480809 CEVL01141250 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 290 207 - Leu TAG [ENA] ¢þ
>WENV170501405 CEVU01115064 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 997 914 - Leu TAG [ENA] ¢þ
>WENV170503993 CEVV01156446 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1171 1254 + Leu TAG [ENA] ¢þ
>WENV170505128 CEVW01031049 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 355 438 + Leu TAG [ENA] ¢þ
>WENV170509777 CEVY01066393 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3080 3163 + Leu TAG [ENA] ¢þ
>WENV170538295 CEWR01067250 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3056 2973 - Leu TAG [ENA] ¢þ
>WENV170605518 FUWD010498219 [FUWD] metagenome; unknown 367 450 + Leu TAG [ENA] ¢þ
>WENV170848390 MDTA01078243 [MDTA] marine metagenome; seawater 1910 1993 + Leu TAG [ENA] ¢þ
>CHL1810009309 KC900889 Haptophyceae Phaeocystis globosa (KC900889) 62312 62395 + Leu TAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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