tRNA genes clustered and arranged according to each identical group

Haptophyceae

Anticodon = TGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.467225 (88 seq.)
>WENV015137 AACY020425155 Marine microbial communities from Global Ocean Sampling (GOS) 978 1055 + Ala TGC [ENA]
>WENV180049109 MPLU02034812 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 157 231 + Ala TGC [ENA] ¢þ
>WENV180101977 OAOX01003826 [OAOX] marine metagenome; l 546 473 - Ala TGC [ENA] ¢þ
>WENV180106335 OAPE01075010 [OAPE] marine metagenome; Sterivex cartridges 39 113 + Ala TGC [ENA] ¢þ
>WENV180106895 OAPF01010719 [OAPF] marine metagenome; ENVO:00002010 618 545 - Ala TGC [ENA] ¢þ
>WENV180112849 OAPP01139730 [OAPP] marine metagenome; Surface water 136 62 - Ala TGC [ENA] ¢þ
>WENV180113437 OAPQ01080587 [OAPQ] marine metagenome; ENVO: 00002149 188 261 + Ala TGC [ENA] ¢þ
>WENV180114162 OAPR01191743 [OAPR] marine metagenome; seawater 145 72 - Ala TGC [ENA] ¢þ
>WENV180114692 OAPS01034188 [OAPS] marine metagenome; sea water 66 140 + Ala TGC [ENA] ¢þ
>WENV180363450 OBNY01058580 [OBNY] marine metagenome; ENVO:00002010 230 303 + Ala TGC [ENA] ¢þ
>WENV180364439 OBOA01008437 [OBOA] marine metagenome; Deep Chlorophyll Maximum 134 207 + Ala TGC [ENA] ¢þ
>WENV180374937 OBOK01047463 [OBOK] marine metagenome; seawater 9 82 + Ala TGC [ENA] ¢þ
>WENV180375251 OBOL01000262 [OBOL] marine metagenome; Surface water 2605 2532 - Ala TGC [ENA] ¢þ
>WENV180382722 OBOT01057367 [OBOT] marine metagenome; 0 101 175 + Ala TGC [ENA] ¢þ
>WENV180384865 OBOY01086489 [OBOY] marine metagenome; Sterile flask 187 260 + Ala TGC [ENA] ¢þ
>WENV180586836 OCON01003651 [OCON] marine metagenome; seawater 179 106 - Ala TGC [ENA] ¢þ
>WENV180589204 OCOR01009002 [OCOR] marine metagenome; ENVO:00002042 210 283 + Ala TGC [ENA] ¢þ
>WENV180590324 OCOT01000140 [OCOT] marine metagenome; ENVO:00002010 2585 2512 - Ala TGC [ENA] ¢þ
>WENV180641598 OCRN01014708 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 660 587 - Ala TGC [ENA] ¢þ
>WENV181307764 OFIR01012514 [OFIR] marine metagenome; seawater 466 393 - Ala TGC [ENA] ¢þ
>WENV181325523 OFLJ01003297 [OFLJ] seawater metagenome; seawater 1687 1760 + Ala TGC [ENA] ¢þ
>WENV181385736 OFRJ01015897 [OFRJ] marine metagenome; seawater 341 414 + Ala TGC [ENA] ¢þ
>WENV181393055 OFRX01038722 [OFRX] seawater metagenome; seawater 605 532 - Ala TGC [ENA] ¢þ
>WENV182540276 OJAH01000066 [OJAH] seawater metagenome; Sea water 2222 2295 + Ala TGC [ENA] ¢þ
>WENV182541000 OJAQ01001926 [OJAQ] seawater metagenome; Sea water 621 694 + Ala TGC [ENA] ¢þ
>WENV182544922 OJBL01000126 [OJBL] seawater metagenome; Sea water 3271 3198 - Ala TGC [ENA] ¢þ
>WENV182551320 OJCC01001362 [OJCC] seawater metagenome; Sea water 93 166 + Ala TGC [ENA] ¢þ
>WENV182553047 OJCQ01014665 [OJCQ] seawater metagenome; Sea water 139 212 + Ala TGC [ENA] ¢þ
>WENV182554335 OJCU01001542 [OJCU] seawater metagenome; Sea water 1122 1195 + Ala TGC [ENA] ¢þ
>WENV182558349 OJDM01000231 [OJDM] seawater metagenome; Sea water 656 583 - Ala TGC [ENA] ¢þ
>WENV182561722 OJDX01000954 [OJDX] seawater metagenome; Sea water 3542 3469 - Ala TGC [ENA] ¢þ
>WENV182563215 OJEB01002260 [OJEB] seawater metagenome; Sea water 621 548 - Ala TGC [ENA] ¢þ
>WENV182564351 OJEE01011213 [OJEE] seawater metagenome; Sea water 114 187 + Ala TGC [ENA] ¢þ
>WENV182569248 OJEY01004234 [OJEY] seawater metagenome; Sea water 67 140 + Ala TGC [ENA] ¢þ
>WENV182569969 OJFB01002970 [OJFB] seawater metagenome; Sea water 2061 1988 - Ala TGC [ENA] ¢þ
>WENV182570821 OJFF01001400 [OJFF] seawater metagenome; Sea water 121 194 + Ala TGC [ENA] ¢þ
>WENV182575740 OJFW01000374 [OJFW] seawater metagenome; Sea water 92 165 + Ala TGC [ENA] ¢þ
>WENV182576701 OJFY01002081 [OJFY] seawater metagenome; Sea water 2061 1988 - Ala TGC [ENA] ¢þ
>WENV182582578 OJHB01001886 [OJHB] seawater metagenome; Sea water 620 693 + Ala TGC [ENA] ¢þ
>WENV182583379 OJHD01007000 [OJHD] seawater metagenome; Sea water 1249 1176 - Ala TGC [ENA] ¢þ
>WENV182589831 OJIG01001841 [OJIG] seawater metagenome; Sea water 53 126 + Ala TGC [ENA] ¢þ
>WENV183054460 OLGT01010842 [OLGT] seawater metagenome; Sea water 123 196 + Ala TGC [ENA] ¢þ
>WENV183054680 OLGU01001124 [OLGU] seawater metagenome; Sea water 67 140 + Ala TGC [ENA] ¢þ
>WENV183059061 OLHS01002373 [OLHS] seawater metagenome; Sea water 113 40 - Ala TGC [ENA] ¢þ
>WENV183059464 OLHU01007169 [OLHU] seawater metagenome; Sea water 562 489 - Ala TGC [ENA] ¢þ
>WENV183619391 OOFQ01003455 [OOFQ] marine metagenome; seawater 420 347 - Ala TGC [ENA] ¢þ
>WENV183620133 OOFR01008617 [OOFR] marine metagenome; seawater 267 340 + Ala TGC [ENA] ¢þ
>WENV183625531 OOGF01053201 [OOGF] marine metagenome; seawater 203 276 + Ala TGC [ENA] ¢þ
>WENV183628922 OOGO01064827 [OOGO] marine metagenome; sea ice 301 227 - Ala TGC [ENA] ¢þ
>WENV183629427 OOGP01039611 [OOGP] marine metagenome; seawater 605 532 - Ala TGC [ENA] ¢þ
>WENV183630047 OOGR01007490 [OOGR] marine metagenome; seawater 473 400 - Ala TGC [ENA] ¢þ
>WENV170114876 CENF01237938 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 213 138 - Ala TGC [ENA] ¢þ
>WENV170137104 CENW01007604 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 342 416 + Ala TGC [ENA] ¢þ
>WENV170147930 CENZ01197761 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1236 1161 - Ala TGC [ENA] ¢þ
>WENV170151232 CEOC01262988 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 76 151 + Ala TGC [ENA] ¢þ
>WENV170157730 CEOJ01088784 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 76 151 + Ala TGC [ENA] ¢þ
>WENV170167485 CEOP01013916 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 524 599 + Ala TGC [ENA] ¢þ
>WENV170179702 CEOW01010075 [CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 299 374 + Ala TGC [ENA] ¢þ
>WENV170187773 CEPA01257104 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 76 151 + Ala TGC [ENA] ¢þ
>WENV170206408 CEPT01236406 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 631 556 - Ala TGC [ENA] ¢þ
>WENV170244134 CEQP01003299 [CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 554 479 - Ala TGC [ENA] ¢þ
>WENV170249707 CEQS01032109 [CEQS] marine metagenome genome assembly TARA_072_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 464 389 - Ala TGC [ENA] ¢þ
>WENV170292175 CESB01028322 [CESB] marine metagenome genome assembly TARA_078_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 582 509 - Ala TGC [ENA] ¢þ
>WENV170296549 CESE01017851 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 84 9 - Ala TGC [ENA] ¢þ
>WENV170300208 CESG01104432 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 604 677 + Ala TGC [ENA] ¢þ
>WENV170319019 CESQ01106937 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 77 + Ala TGC [ENA] ¢þ
>WENV170426579 CEUQ01096641 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 156 231 + Ala TGC [ENA] ¢þ
>WENV170458533 CEVB01088572 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 516 441 - Ala TGC [ENA] ¢þ
>WENV170461681 CEVD01015205 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 740 815 + Ala TGC [ENA] ¢þ
>WENV170527974 CEWJ01012515 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 76 151 + Ala TGC [ENA] ¢þ
>WENV170567865 FLMP01008103 [FLMP] seawater metagenome; seawater 2843 2768 - Ala TGC [ENA] ¢þ
>WENV170580985 FUFK010056391 [FUFK] metagenome; unknown 82 156 + Ala TGC [ENA] ¢þ
>WENV170582808 FUFK010113136 [FUFK] metagenome; unknown 1118 1044 - Ala TGC [ENA] ¢þ
>WENV170586145 FUFK010369749 [FUFK] metagenome; unknown 172 247 + Ala TGC [ENA] ¢þ
>WENV170590327 FUFK010713415 [FUFK] metagenome; unknown 360 435 + Ala TGC [ENA] ¢þ
>WENV170592824 FUFK010821789 [FUFK] metagenome; unknown 359 433 + Ala TGC [ENA] ¢þ
>WENV170593209 FUFK010852655 [FUFK] metagenome; unknown 73 148 + Ala TGC [ENA] ¢þ
>WENV170593307 FUFK010857462 [FUFK] metagenome; unknown 1353 1279 - Ala TGC [ENA] ¢þ
>WENV170594847 FUFK011501641 [FUFK] metagenome; unknown 42 117 + Ala TGC [ENA] ¢þ
>WENV170595004 FUFK011570743 [FUFK] metagenome; unknown 179 253 + Ala TGC [ENA] ¢þ
>WENV170596170 FUFK012136097 [FUFK] metagenome; unknown 430 355 - Ala TGC [ENA] ¢þ
>WENV170600657 FUWD010136659 [FUWD] metagenome; unknown 86 11 - Ala TGC [ENA] ¢þ
>WENV170618481 FUWD012970735 [FUWD] metagenome; unknown 87 13 - Ala TGC [ENA] ¢þ
>WENV170948742 MEHZ011272949 [MEHZ] marine metagenome; marine surface water 82 157 + Ala TGC [ENA] ¢þ
>CHL1810008572 KC573041 Haptophyceae Pavlova lutheri ATCC 50092 (KC573041) 95209 95281 + Ala TGC [ENA] ¡û
>CHL1810057810 MG520331 Haptophyceae Chrysochromulina parva (MG520331) 67150 67076 - Ala TGC [ENA] ¡û
>WENV041118 AACY022135495 Marine microbial communities from Global Ocean Sampling (GOS) 280 357 + Ala TGC [ENA]
>WENV050065 AACY022843031 Marine microbial communities from Global Ocean Sampling (GOS) 175 98 - Ala TGC [ENA]
Identical group No.475572 (14 seq.)
>WENV180398232 OBQA01002072 [OBQA] marine metagenome; PVDF and polycarbonate filters 1181 1107 - Ala TGC [ENA] ¢þ
>WENV181093071 OEBK01185342 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 1 74 + Ala TGC [ENA] ¢þ
>WENV181120819 OEFK01072074 [OEFK] marine metagenome; ENVO:00002010 seawater 394 321 - Ala TGC [ENA] ¢þ
>WENV182541364 OJAT01003403 [OJAT] seawater metagenome; Sea water 140 213 + Ala TGC [ENA] ¢þ
>WENV182557219 OJDI01002464 [OJDI] seawater metagenome; Sea water 634 707 + Ala TGC [ENA] ¢þ
>WENV182560049 OJDR01003137 [OJDR] seawater metagenome; Sea water 538 465 - Ala TGC [ENA] ¢þ
>WENV182566352 OJEL01000017 [OJEL] seawater metagenome; Sea water 422 349 - Ala TGC [ENA] ¢þ
>WENV182568309 OJET01000516 [OJET] seawater metagenome; Sea water 101 174 + Ala TGC [ENA] ¢þ
>WENV182574763 OJFS01001213 [OJFS] seawater metagenome; Sea water 6951 6878 - Ala TGC [ENA] ¢þ
>WENV183057885 OLHM01017182 [OLHM] seawater metagenome; Sea water 602 529 - Ala TGC [ENA] ¢þ
>WENV183059847 OLHW01000017 [OLHW] seawater metagenome; Sea water 1914 1987 + Ala TGC [ENA] ¢þ
>CHL1810009306 KC900889 Haptophyceae Phaeocystis globosa (KC900889) 41381 41454 + Ala TGC [ENA] ¡û
>CHL090101597 AY741371 Haptophyceae Emiliania huxleyi 1693 1766 + Ala TGC [ENA] ¡û
>CHL090101621 AY741371 Haptophyceae Emiliania huxleyi 19173 19100 - Ala TGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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