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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Herpesvirales
Anticodon = GTC
HIT:
3 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.744238 (2 seq.)
>VRL181000449
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
8658
8730
+
Asp
GTC
[ENA]
¡û
>VRL181000541
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
8659
8731
+
Asp
GTC
[ENA]
¡û
Identical group No.744239 (2 seq.)
>VRL181000452
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
139424
139353
-
Asp
GTC
[ENA]
¡û
>VRL181000544
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
139598
139527
-
Asp
GTC
[ENA]
¡û
Identical group No.820578 (2 seq.)
>VRL181000450
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
11730
11800
+
Asp
GTC
[ENA]
¡û
>VRL181000542
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
11736
11806
+
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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