tRNA genes clustered and arranged according to each identical group

Hot springs metagenome ctg_1106445192081

Anticodon = GGA

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8304 (62 seq.)
>W1710787525 LJJR01000007 Deinococcota Thermus scotoductus [LJJR] 110273 110180 - Ser GGA [ENA] ¡û
>C171047192 CP016312 Deinococcota Thermus brockianus GE-1 [CP016312] 352674 352767 + Ser GGA - ¡û
>W131160740 AQWU01000070 Deinococcota Thermus igniterrae ATCC 700962 [AQWU] 68714 68621 - Ser GGA [ENA] ¡û
>W131167511 ARDI01000003 Deinococcota Thermus oshimai DSM 12092 [ARDI] 327825 327732 - Ser GGA [ENA] ¡û
>W131177900 ARLD01000077 Deinococcota Thermus scotoductus DSM 8553 [ARLD] 47595 47502 - Ser GGA [ENA] ¡û
>W131218086 ATXJ01000003 Deinococcota Thermus islandicus DSM 21543 [ATXJ] 13440 13533 + Ser GGA [ENA] ¡û
>W131231957 AUIW01000006 Deinococcota Thermus antranikianii DSM 12462 [AUIW] 69038 68945 - Ser GGA [ENA] ¡û
>W141080506 ATNI01000048 Deinococcota Thermus sp. NMX2.A1 [ATNI] 17147 17240 + Ser GGA [ENA] ¡û
>WENV181407939 OGCH01000260 [OGCH] hot springs metagenome; hot springs 1599 1506 - Ser GGA [ENA] ¢þ
>W08011565 ABVK01000001 Deinococcota Thermus aquaticus Y51MC23 [ABVK] 233685 233595 - Ser GGA [ENA] ¡û
>C191159654 CP038452 Deinococcota Thermus caldilimi YIM 78456 [CP038452] 912201 912294 + Ser GGA - ¡û
>W141818235 JQLJ01000001 Deinococcota Thermus scotoductus KI2 [JQLJ] 881245 881338 + Ser GGA [ENA] ¡û
>W141818299 JQLK01000001 Deinococcota Thermus tengchongensis YIM 77401 [JQLK] 1343814 1343721 - Ser GGA [ENA] ¡û
>W141820352 JQMV01000003 Deinococcota Thermus amyloliquefaciens YIM 77409 [JQMV] 1311329 1311422 + Ser GGA [ENA] ¡û
>W141820774 JQNC01000003 Deinococcota Thermus caliditerrae [JQNC] 352936 352843 - Ser GGA [ENA] ¡û
>W1911578802 PELL01000298 Deinococcota Thermus scotoductus 39_S39 [PELL] 14049 13956 - Ser GGA [ENA] ¡û
>W1911578843 PELM01000167 Deinococcota Thermus scotoductus 38_S38 [PELM] 1272 1365 + Ser GGA [ENA] ¡û
>W1911578889 PELN01000105 Deinococcota Thermus scotoductus 37_S37 [PELN] 1266 1359 + Ser GGA [ENA] ¡û
>W1911578941 PELO01000150 Deinococcota Thermus scotoductus 35_S35 [PELO] 610 517 - Ser GGA [ENA] ¡û
>W1911578984 PELP01000206 Deinococcota Thermus scotoductus 34_S34 [PELP] 710 617 - Ser GGA [ENA] ¡û
>W1911579043 PELQ01000147 Deinococcota Thermus scotoductus 33_S33 [PELQ] 1280 1373 + Ser GGA [ENA] ¡û
>W1911579086 PELR01000233 Deinococcota Thermus scotoductus 32_S32 [PELR] 2197 2104 - Ser GGA [ENA] ¡û
>W1911579128 PELS01000136 Deinococcota Thermus scotoductus 31_S31 [PELS] 1280 1373 + Ser GGA [ENA] ¡û
>W1911579186 PELT01000140 Deinococcota Thermus scotoductus 30_S30 [PELT] 1276 1369 + Ser GGA [ENA] ¡û
>W1911579223 PELU01000131 Deinococcota Thermus scotoductus 29_S29 [PELU] 1266 1359 + Ser GGA [ENA] ¡û
>W1911579275 PELV01000183 Deinococcota Thermus scotoductus 28_S28 [PELV] 1274 1367 + Ser GGA [ENA] ¡û
>W1911579326 PELW01000170 Deinococcota Thermus scotoductus 27_S27 [PELW] 1256 1349 + Ser GGA [ENA] ¡û
>W1911579378 PELX01000159 Deinococcota Thermus scotoductus 26_S26 [PELX] 1266 1359 + Ser GGA [ENA] ¡û
>W1911579413 PELY01000055 Deinococcota Thermus scotoductus 25_S25 [PELY] 1277 1370 + Ser GGA [ENA] ¡û
>W1911579465 PELZ01000088 Deinococcota Thermus scotoductus 24_S24 [PELZ] 15812 15905 + Ser GGA [ENA] ¡û
>W1911579507 PEMA01000151 Deinococcota Thermus scotoductus 23_S23 [PEMA] 1264 1357 + Ser GGA [ENA] ¡û
>W1911579567 PEMB01000309 Deinococcota Thermus scotoductus 22_S22 [PEMB] 612 519 - Ser GGA [ENA] ¡û
>W1911579611 PEMC01000147 Deinococcota Thermus scotoductus 21_S21 [PEMC] 613 520 - Ser GGA [ENA] ¡û
>W1911579653 PEMD01000066 Deinococcota Thermus scotoductus 20_S20 [PEMD] 598 505 - Ser GGA [ENA] ¡û
>W1911579705 PEME01000139 Deinococcota Thermus scotoductus 19_S19 [PEME] 1272 1365 + Ser GGA [ENA] ¡û
>W1911579755 PEMF01000175 Deinococcota Thermus scotoductus 18_S18 [PEMF] 1270 1363 + Ser GGA [ENA] ¡û
>W1911579799 PEMG01000166 Deinococcota Thermus scotoductus 17_S17 [PEMG] 16528 16435 - Ser GGA [ENA] ¡û
>W1911579843 PEMH01000098 Deinococcota Thermus scotoductus 16_S16 [PEMH] 1264 1357 + Ser GGA [ENA] ¡û
>W1911579889 PEMI01000155 Deinococcota Thermus scotoductus 15_S15 [PEMI] 2197 2104 - Ser GGA [ENA] ¡û
>W1911579962 PEMJ01000343 Deinococcota Thermus scotoductus 14_S14 [PEMJ] 10906 10999 + Ser GGA [ENA] ¡û
>W1911579987 PEMK01000136 Deinococcota Thermus scotoductus 13_S13 [PEMK] 1266 1359 + Ser GGA [ENA] ¡û
>W1911580018 PEML01000035 Deinococcota Thermus scotoductus 12_S12 [PEML] 5028 4935 - Ser GGA [ENA] ¡û
>W1911580135 PEMN01000153 Deinococcota Thermus scotoductus 10_S10 [PEMN] 610 517 - Ser GGA [ENA] ¡û
>W1911580177 PEMO01000115 Deinococcota Thermus scotoductus 9_S9 [PEMO] 1282 1375 + Ser GGA [ENA] ¡û
>W1911580226 PEMP01000144 Deinococcota Thermus scotoductus 8_S8 [PEMP] 17182 17275 + Ser GGA [ENA] ¡û
>W1911580274 PEMQ01000199 Deinococcota Thermus scotoductus 7_S7 [PEMQ] 609 516 - Ser GGA [ENA] ¡û
>W1911580334 PEMR01000130 Deinococcota Thermus scotoductus 6_S6 [PEMR] 1275 1368 + Ser GGA [ENA] ¡û
>W1911580371 PEMS01000162 Deinococcota Thermus scotoductus 5_S5 [PEMS] 699 606 - Ser GGA [ENA] ¡û
>W1911580426 PEMT01000146 Deinococcota Thermus scotoductus 4_S4 [PEMT] 597 504 - Ser GGA [ENA] ¡û
>W1911580470 PEMU01000117 Deinococcota Thermus scotoductus 3_S3 [PEMU] 598 505 - Ser GGA [ENA] ¡û
>W1911580516 PEMV01000152 Deinococcota Thermus scotoductus 2_S2 [PEMV] 615 522 - Ser GGA [ENA] ¡û
>W1911580566 PEMW01000196 Deinococcota Thermus scotoductus 1_S1 [PEMW] 1270 1363 + Ser GGA [ENA] ¡û
>W1810268422 PRDA01000003 Deinococcota Thermus tenuipuniceus YIM 76954 [PRDA] 89663 89756 + Ser GGA [ENA] ¡û
>W1810605095 QGMX01000004 Deinococcota Thermus caldifontis YIM 73026 [QGMX] 141240 141333 + Ser GGA [ENA] ¡û
>ENV09004158 ADKJ01000347 Hot springs metagenome ctg_1106445192081 1937 1844 - Ser GGA [ENA] ¡û
>C11123050 CP001962 Deinococcota Thermus scotoductus SA-01 [CP001962] 1517017 1517110 + Ser GGA [Ensembl] ¡û
>C161028675 CP010822 Deinococcota Thermus aquaticus Y51MC23 [CP010822] 1515573 1515666 + Ser GGA - ¡û
>W1610045415 BBBN01000203 Deinococcota Thermus sp. JCM 17653 [BBBN] 2410 2317 - Ser GGA [ENA] ¡û
>C131002395 CP003249 Deinococcota Thermus oshimai JL-2 [CP003249] 1424199 1424292 + Ser GGA [Ensembl] ¡û
>W1610651380 LJJR01000007 Deinococcota Thermus scotoductus [LJJR] 110273 110180 - Ser GGA [ENA] ¡û
>W1710042256 BBBN01000203 Deinococcota Thermus sp. JCM 17653 [BBBN] 2410 2317 - Ser GGA [ENA] ¡û
>W1710514636 FNBC01000003 Deinococcota Thermus arciformis [FNBC] 72258 72165 - Ser GGA [ENA] ¡û
Identical group No.12941 (3 seq.)
>WENV181229039 OFEJ01000117 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 6930 6838 - Ser GGA [ENA] ¢þ
>WENV181405161 OGCB01018635 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 97 5 - Ser GGA [ENA] ¢þ
>ENV09004147 ADKJ01000072 Hot springs metagenome ctg_1106445192081 327 419 + Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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