tRNA genes clustered and arranged according to each identical group

Hydrothermal vent metagenome LCHCB.C1

Anticodon = GTT

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.278521 (34 seq.)
>W131110924 APLF01000009 Bacteroidota Psychroflexus gondwanensis ACAM 44 [APLF] 74486 74562 + Asn GTT [ENA] ¡û
>w015961 AAPR01000002 Bacteroidota Psychroflexus torquis ATCC 700755 [AAPR] 207000 207078 + Asn GTT [ENA] ¡û
>WENV180287452 OBIK01061351 [OBIK] hydrothermal vent metagenome; sea water 151 77 - Asn GTT [ENA] ¢þ
>WENV180383349 OBOU01041656 [OBOU] marine metagenome; ENV:00002010 390 316 - Asn GTT [ENA] ¢þ
>WENV180639180 OCRI01172181 [OCRI] marine metagenome; Sterile flask 146 72 - Asn GTT [ENA] ¢þ
>WENV181309603 OFIW01011994 [OFIW] marine metagenome; seawater 380 454 + Asn GTT [ENA] ¢þ
>WENV181391566 OFRT01023277 [OFRT] seawater metagenome; seawater 147 221 + Asn GTT [ENA] ¢þ
>WENV182547551 OJBS01026842 [OJBS] seawater metagenome; Sea water 549 475 - Asn GTT [ENA] ¢þ
>WENV182559181 OJDO01003299 [OJDO] seawater metagenome; Sea water 414 340 - Asn GTT [ENA] ¢þ
>WENV182565675 OJEH01024667 [OJEH] seawater metagenome; Sea water 981 907 - Asn GTT [ENA] ¢þ
>WENV182566012 OJEI01008900 [OJEI] seawater metagenome; Sea water 13 87 + Asn GTT [ENA] ¢þ
>WENV182569573 OJEZ01013953 [OJEZ] seawater metagenome; Sea water 625 551 - Asn GTT [ENA] ¢þ
>WENV182574071 OJFQ01017336 [OJFQ] seawater metagenome; Sea water 375 449 + Asn GTT [ENA] ¢þ
>WENV182589424 OJID01002868 [OJID] seawater metagenome; Sea water 1361 1435 + Asn GTT [ENA] ¢þ
>WENV182594397 OJIV01006984 [OJIV] seawater metagenome; Sea water 1406 1480 + Asn GTT [ENA] ¢þ
>WENV183619066 OOFP01023142 [OOFP] marine metagenome; seawater 147 221 + Asn GTT [ENA] ¢þ
>WENV183621082 OOFT01004850 [OOFT] marine metagenome; sea ice 142 68 - Asn GTT [ENA] ¢þ
>WENV183622108 OOFV01007034 [OOFV] marine metagenome; seawater 797 723 - Asn GTT [ENA] ¢þ
>WENV183623162 OOFX01022024 [OOFX] marine metagenome; sea ice 306 232 - Asn GTT [ENA] ¢þ
>WENV183625577 OOGG01001538 [OOGG] marine metagenome; sea ice 414 340 - Asn GTT [ENA] ¢þ
>WENV183627707 OOGL01031016 [OOGL] marine metagenome; sea ice 376 302 - Asn GTT [ENA] ¢þ
>WENV170169596 CEOP01220386 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 392 316 - Asn GTT [ENA] ¢þ
>WENV170270505 CERI01096982 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 334 258 - Asn GTT [ENA] ¢þ
>WENV170603439 FUWD010309056 [FUWD] metagenome; unknown 223 147 - Asn GTT [ENA] ¢þ
>WENV170783341 MAAC01016037 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 1933 1859 - Asn GTT [ENA] ¢þ
>WENV170824376 MDSY01074610 [MDSY] marine metagenome; seawater 3789 3865 + Asn GTT [ENA] ¢þ
>WENV170950144 MEHZ011480117 [MEHZ] marine metagenome; marine surface water 985 909 - Asn GTT [ENA] ¢þ
>W1910891619 NEXQ01000026 Bacteroidota Psychroflexus sp. S27 [NEXQ] 36732 36658 - Asn GTT [ENA] ¡û
>W1810157153 PJBS01000146 Bacteroidota Psychroflexus sp. MES1-P1E [PJBS] 35795 35869 + Asn GTT [ENA] ¡û
>ENV09001861 ACQI01017412 Hydrothermal vent metagenome LCHCB.C1 145 71 - Asn GTT [ENA] ¡û
>WENV000394 AACY020011876 Marine microbial communities from Global Ocean Sampling (GOS) 312 234 - Asn GTT [ENA]
>C131008930 CP003879 Bacteroidota Psychroflexus torquis ATCC 700755 [CP003879] 2668767 2668843 + Asn GTT [Ensembl] ¡û
>W1710532315 FNQF01000008 Bacteroidota Psychroflexus halocasei [FNQF] 45581 45505 - Asn GTT [ENA] ¡û
>W1710582409 FQTW01000006 Bacteroidota Psychroflexus salarius [FQTW] 146480 146404 - Asn GTT [ENA] ¡û
Identical group No.490052 (2 seq.)
>ENV09001658 ACQI01000927 Hydrothermal vent metagenome LCHCB.C1 169 94 - Asn GTT [ENA] ¡û
>ENV09001841 ACQI01014941 Hydrothermal vent metagenome LCHCB.C1 137 62 - Asn GTT [ENA] ¡û
Identical group No.673421 (4 seq.)
>W131242950 CAOS01000003 Bacillota Desulforamulus hydrothermalis Lam5 = DSM 18033 [CAOS] 493206 493132 - Asn GTT [ENA] ¡û
>ENV09001722 ACQI01003615 Hydrothermal vent metagenome LCHCB.C1 955 881 - Asn GTT [ENA] ¡û
>W1710586468 FQXF01000014 Bacillota Desulforamulus hydrothermalis Lam5 = DSM 18033 [FQXF] 368 442 + Asn GTT [ENA] ¡û
>W1710586480 FQXF01000027 Bacillota Desulforamulus hydrothermalis Lam5 = DSM 18033 [FQXF] 25909 25835 - Asn GTT [ENA] ¡û
Identical group No.675846 (1 seq.)
>ENV09001699 ACQI01002989 Hydrothermal vent metagenome LCHCB.C1 309 235 - Asn GTT [ENA] ¡û
Identical group No.675858 (1 seq.)
>ENV09001793 ACQI01006888 Hydrothermal vent metagenome LCHCB.C1 525 599 + Asn GTT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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