tRNA genes clustered and arranged according to each identical group

Line Islands Corals, viral fraction from water of Palmyra (SRP000141)

Anticodon = TGC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.296620 (24 seq.)
>WENV018243 AACY020503803 Marine microbial communities from Global Ocean Sampling (GOS) 279 203 - Ala TGC [ENA]
>ENV08000881 ABML01011701 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 52 127 + Ala TGC [ENA] ¡û
>WENV170136440 CENV01035139 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 693 766 + Ala TGC [ENA] ¢þ
>WENV170206076 CEPT01154619 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1662 1589 - Ala TGC [ENA] ¢þ
>WENV170310743 CESM01067659 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 825 898 + Ala TGC [ENA] ¢þ
>WENV170345289 CETE01261163 [CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1092 1167 + Ala TGC [ENA] ¢þ
>WENV170410395 CEUJ01097893 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1483 1558 + Ala TGC [ENA] ¢þ
>WENV170413657 CEUK01130730 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 612 537 - Ala TGC [ENA] ¢þ
>WENV170424150 CEUO01075540 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 504 429 - Ala TGC [ENA] ¢þ
>WENV170436487 CEUT01059636 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 487 562 + Ala TGC [ENA] ¢þ
>WENV170461036 CEVC01252499 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 417 342 - Ala TGC [ENA] ¢þ
>WENV170472986 CEVG01338860 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1305 1232 - Ala TGC [ENA] ¢þ
>WENV170490400 CEVP01366010 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 953 1026 + Ala TGC [ENA] ¢þ
>WENV170496250 CEVS01042382 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7726 7799 + Ala TGC [ENA] ¢þ
>WENV170499214 CEVT01129203 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1341 1268 - Ala TGC [ENA] ¢þ
>WENV170502410 CEVU01358147 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 523 + Ala TGC [ENA] ¢þ
>WENV170513145 CEVZ01353129 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 138 211 + Ala TGC [ENA] ¢þ
>WENV170521572 CEWG01020034 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3272 3345 + Ala TGC [ENA] ¢þ
>WENV170786289 MDSV01000860 [MDSV] marine metagenome; seawater 2291 2364 + Ala TGC [ENA] ¢þ
>WENV170840245 MDSZ01200497 [MDSZ] marine metagenome; seawater 297 224 - Ala TGC [ENA] ¢þ
>WENV170879606 MDTC01097776 [MDTC] marine metagenome; seawater 850 923 + Ala TGC [ENA] ¢þ
>WENV170917478 MDTE01193332 [MDTE] marine metagenome; seawater 526 453 - Ala TGC [ENA] ¢þ
>SRA1000906 SRR001049.78018 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 52 127 + Ala TGC [SRA]
>WENV008568 AACY020230470 Marine microbial communities from Global Ocean Sampling (GOS) 180 256 + Ala TGC [ENA]
Identical group No.647142 (1 seq.)
>SRA1000942 SRR001049.245820 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 1 76 + Ala TGC [SRA]
Identical group No.647143 (1 seq.)
>SRA1000948 SRR001049.270468 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 1 76 + Ala TGC [SRA]
Identical group No.647145 (1 seq.)
>SRA1000959 SRR001049.336454 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 73 1 - Ala TGC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK