tRNA genes clustered and arranged according to each identical group

Line Islands Corals, microbial fraction from water of Palmyra (SRP000140)

Anticodon = TTC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.479545 (30 seq.)
>WENV180047344 MPLT02208883 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 2647 2719 + Glu TTC [ENA] ¢þ
>ENV08000366 ABMC01015343 microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands) 128 54 - Glu TTC [ENA] ¡û
>ENV08000858 ABMK01028537 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 43 115 + Glu TTC [ENA] ¡û
>WENV183807317 PVBE011190239 [PVBE] marine metagenome; water 477 549 + Glu TTC [ENA] ¢þ
>WENV170255404 CEQW01107785 [CEQW] marine metagenome genome assembly TARA_070_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 537 611 + Glu TTC [ENA] ¢þ
>WENV170302576 CESH01172370 [CESH] marine metagenome genome assembly TARA_094_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 197 123 - Glu TTC [ENA] ¢þ
>WENV170309630 CESL01157534 [CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1651 1577 - Glu TTC [ENA] ¢þ
>WENV170311863 CESM01195547 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 197 123 - Glu TTC [ENA] ¢þ
>WENV170330241 CESV01191683 [CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1341 1415 + Glu TTC [ENA] ¢þ
>WENV170345376 CETE01271760 [CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6680 6754 + Glu TTC [ENA] ¢þ
>WENV170356027 CETI01506159 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 327 253 - Glu TTC [ENA] ¢þ
>WENV170357936 CETK01035882 [CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6680 6754 + Glu TTC [ENA] ¢þ
>WENV170374585 CETT01105014 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1163 1089 - Glu TTC [ENA] ¢þ
>WENV170402544 CEUE01491003 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 206 278 + Glu TTC [ENA] ¢þ
>WENV170405541 CEUG01104610 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6680 6754 + Glu TTC [ENA] ¢þ
>WENV170424346 CEUO01094937 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 42804 42730 - Glu TTC [ENA] ¢þ
>WENV170428696 CEUQ01487250 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 139 65 - Glu TTC [ENA] ¢þ
>WENV170440291 CEUV01086449 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 941 867 - Glu TTC [ENA] ¢þ
>WENV170460888 CEVC01172422 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6682 6756 + Glu TTC [ENA] ¢þ
>WENV170503835 CEVV01135774 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 84 12 - Glu TTC [ENA] ¢þ
>WENV170515442 CEWB01024808 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 352 424 + Glu TTC [ENA] ¢þ
>WENV170519195 CEWE01212312 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6550 6624 + Glu TTC [ENA] ¢þ
>WENV170522851 CEWG01137278 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 42799 42725 - Glu TTC [ENA] ¢þ
>WENV170524630 CEWH01034968 [CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6678 6752 + Glu TTC [ENA] ¢þ
>WENV170528202 CEWJ01024629 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 82 156 + Glu TTC [ENA] ¢þ
>WENV170798554 MDSV01198601 [MDSV] marine metagenome; seawater 5828 5756 - Glu TTC [ENA] ¢þ
>WENV170884743 MDTC01188788 [MDTC] marine metagenome; seawater 3927 4002 + Glu TTC [ENA] ¢þ
>WENV170892545 MDTD01039568 [MDTD] marine metagenome; seawater 6718 6792 + Glu TTC [ENA] ¢þ
>SRA1000352 SRR001041.183965 Line Islands Corals, microbial fraction of Christmas Atoll (SRP000133) 128 54 - Glu TTC [SRA]
>SRA1000890 SRR001048.338452 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 43 115 + Glu TTC [SRA]
Identical group No.551035 (2 seq.)
>ENV08000861 ABMK01033568 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 41 115 + Glu TTC [ENA] ¡û
>SRA1000876 SRR001048.172166 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 41 115 + Glu TTC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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