tRNA genes clustered and arranged according to each identical group

Line Islands Corals, microbial fraction of Christmas Atoll (SRP000133)

Anticodon = GAC

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.656063 (83 seq.)
>W1710806549 LKBA01000024 Alphaproteobacteria Aliiroseovarius crassostreae [LKBA] 11387 11461 + Val GAC [ENA] ¡û
>W1711126417 LUOO01000047 Alphaproteobacteria Maritimibacter sp. REDSEA-S28_B5 [LUOO] 19690 19616 - Val GAC [ENA] ¡û
>W1711126457 LUOP01000011 Alphaproteobacteria Maritimibacter sp. REDSEA-S40_B3 [LUOP] 39828 39754 - Val GAC [ENA] ¡û
>W1711229371 LXYJ01000030 Alphaproteobacteria Jannaschia sp. EhC01 [LXYJ] 47412 47486 + Val GAC [ENA] ¡û
>W1711572417 MNBL01000148 Alphaproteobacteria Nioella sediminis JS7-11 [MNBL] 5972 5898 - Val GAC [ENA] ¡û
>W1711572444 MNBW01000008 Alphaproteobacteria Nioella nitratireducens [MNBW] 213923 213849 - Val GAC [ENA] ¡û
>W1711585235 MNZL01000160 Alphaproteobacteria Rhodobacterales bacterium CG2_30_65_12 [MNZL] 1114 1040 - Val GAC [ENA] ¡û
>C011080 CP000264 Alphaproteobacteria Jannaschia sp. CCS1 [CP000264] 4101511 4101585 + Val GAC [Ensembl] ¡û
>w012768 AAMT01000003 Alphaproteobacteria Maritimibacter alkaliphilus HTCC2654 [AAMT] 9935 10009 + Val GAC [ENA] ¡û
>WENV180380758 OBOR01014616 [OBOR] marine metagenome; ENVO 00002227 264 338 + Val GAC [ENA] ¢þ
>W141142906 AWRV01000264 Alphaproteobacteria Rhodobacteraceae bacterium PD-2 [AWRV] 1718 1792 + Val GAC [ENA] ¡û
>WENV183623618 OOGA01020608 [OOGA] marine metagenome; sea ice 401 475 + Val GAC [ENA] ¢þ
>ENV08000378 ABMC01064958 microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands) 11 85 + Val GAC [ENA] ¡û
>WENV183704028 PDWI01000005 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 230781 230707 - Val GAC [ENA] ¢þ
>WENV183710835 PDWI01054280 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 2998 3072 + Val GAC [ENA] ¢þ
>WENV183711608 PDWI01074484 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 2554 2628 + Val GAC [ENA] ¢þ
>WENV183713026 PDWI01122030 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1223 1149 - Val GAC [ENA] ¢þ
>WENV183713049 PDWI01122610 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1609 1683 + Val GAC [ENA] ¢þ
>WENV183713620 PDWI01145640 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1575 1649 + Val GAC [ENA] ¢þ
>WENV183716564 PDWJ01000049 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 128055 127981 - Val GAC [ENA] ¢þ
>WENV183721436 PDWJ01069436 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1547 1621 + Val GAC [ENA] ¢þ
>WENV183721695 PDWJ01080895 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 187 113 - Val GAC [ENA] ¢þ
>WENV170013166 ATLU01000127 [ATLU] bioreactor metagenome; continuous culture bioreactor inoculated with sediment procaryotes from the German 11588 11662 + Val GAC [ENA] ¢þ
>WENV170013205 ATLU01000383 [ATLU] bioreactor metagenome; continuous culture bioreactor inoculated with sediment procaryotes from the German 2462 2388 - Val GAC [ENA] ¢þ
>WENV170013300 ATLU01004044 [ATLU] bioreactor metagenome; continuous culture bioreactor inoculated with sediment procaryotes from the German 82 156 + Val GAC [ENA] ¢þ
>WENV170014545 AYRH01003751 [AYRH] bioreactor metagenome; day 46 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment 472 546 + Val GAC [ENA] ¢þ
>WENV170229329 CEQG01105416 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1123 1049 - Val GAC [ENA] ¢þ
>WENV170234604 CEQK01103230 [CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 130 204 + Val GAC [ENA] ¢þ
>WENV170424922 CEUP01023169 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 146 220 + Val GAC [ENA] ¢þ
>WENV170477687 CEVJ01095066 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1315 1389 + Val GAC [ENA] ¢þ
>WENV170488625 CEVO01245603 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 811 885 + Val GAC [ENA] ¢þ
>WENV170635326 JDSF01002975 [JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA 532 606 + Val GAC [ENA] ¢þ
>WENV170646337 JQGR01000031 [JQGR] bioreactor metagenome; continuous culture inoculated with microbial biomass from the upper 2 cm of a marine 24823 24749 - Val GAC [ENA] ¢þ
>WENV170704968 LLEO01000099 [LLEO] bioreactor metagenome; day35 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 11561 11487 - Val GAC [ENA] ¢þ
>WENV170727356 LULE01000003 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 39828 39754 - Val GAC [ENA] ¢þ
>WENV170734535 LULK01009265 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 1642 1716 + Val GAC [ENA] ¢þ
>WENV170739314 LULQ01000184 [LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m 19690 19616 - Val GAC [ENA] ¢þ
>WENV170759364 LUMS01015528 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 130 56 - Val GAC [ENA] ¢þ
>W09102722 AAIG01000001 Alphaproteobacteria Jannaschia sp. CCS1 [AAIG] 286233 286307 + Val GAC [ENA] ¡û
>C181052354 CP021404 Alphaproteobacteria Pacificitalea manganoxidans DY25 [CP021404] 74135 74061 - Val GAC - ¡û
>C191020052 CP022303 Alphaproteobacteria Thalassococcus sp. S3 [CP022303] 771568 771494 - Val GAC - ¡û
>C191160513 CP038492 Alphaproteobacteria Rhodophyticola sp. CCM32 [CP038492] 3714606 3714532 - Val GAC - ¡û
>C191184407 CP040932 Alphaproteobacteria Oceanicola sp. D3 [CP040932] 4017187 4017113 - Val GAC - ¡û
>W141813551 JQEY01000006 Alphaproteobacteria Palleronia rufa MOLA 401 [JQEY] 144747 144821 + Val GAC [ENA] ¡û
>W1910442759 FWFM01000008 Alphaproteobacteria Marinovum algicola CECT 5396 [FWFM] 146508 146434 - Val GAC [ENA] ¡û
>W1910442943 FWFQ01000014 Alphaproteobacteria Pseudoruegeria aquimaris CECT 7680 [FWFQ] 84484 84410 - Val GAC [ENA] ¡û
>W1910443160 FWFV01000005 Alphaproteobacteria Palleronia marisminoris CECT 7066 [FWFV] 204689 204615 - Val GAC [ENA] ¡û
>W1910499051 FXXQ01000002 Alphaproteobacteria Boseongicola aestuarii CECT 8489 [FXXQ] 399914 399988 + Val GAC [ENA] ¡û
>W1910549367 FZPF01000008 Alphaproteobacteria Jannaschia aquimarina DSM 28248 [FZPF] 103142 103216 + Val GAC [ENA] ¡û
>W1910584266 JXTF01000144 Alphaproteobacteria Roseovarius sp. JS7-11 [JXTF] 5972 5898 - Val GAC [ENA] ¡û
>W1911538427 OMOI01000002 Alphaproteobacteria Aliiroseovarius pelagivivens CECT 8811 [OMOI] 806282 806208 - Val GAC [ENA] ¡û
>W1911539767 ONZF01000002 Alphaproteobacteria Palleronia abyssalis CECT 8504 [ONZF] 630561 630487 - Val GAC [ENA] ¡û
>SRA1000342 SRR001041.55345 Line Islands Corals, microbial fraction of Christmas Atoll (SRP000133) 11 85 + Val GAC [SRA]
>W1810365102 PVTT01000002 Alphaproteobacteria Hasllibacter halocynthiae DSM 29318 [PVTT] 1020246 1020172 - Val GAC [ENA] ¡û
>W1810594726 QGDJ01000021 Alphaproteobacteria Jannaschia seohaensis DSM 25227 [QGDJ] 20436 20362 - Val GAC [ENA] ¡û
>W1810685672 QKZL01000006 Alphaproteobacteria Palleronia aestuarii DSM 22009 [QKZL] 130331 130257 - Val GAC [ENA] ¡û
>W1810761092 QPLJ01000001 Alphaproteobacteria Jannaschia formosa 12N15 [QPLJ] 441632 441706 + Val GAC [ENA] ¡û
>C151073524 CP010855 Alphaproteobacteria Marinovum algicola DG 898 [CP010855] 373056 372982 - Val GAC [Ensembl] ¡û
>ENV09001868 ACQI01018014 Hydrothermal vent metagenome LCHCB.C1 202 276 + Val GAC [ENA] ¡û
>W1510000311 AQQZ01000002 Alphaproteobacteria Pseudaestuariivita atlantica 22II-S11-z3 [AQQZ] 35935 35861 - Val GAC [ENA] ¡û
>W1511524567 JYFE01000050 Alphaproteobacteria Jannaschia aquimarina GSW-M26 [JYFE] 12423 12349 - Val GAC [ENA] ¡û
>W1511686534 LFTY01000002 Alphaproteobacteria Candidatus Rhodobacter lobularis symbiont of Oscarella lobularis [LFTY] 714507 714433 - Val GAC [ENA] ¡û
>W1610092464 CYPR01000003 Alphaproteobacteria Jannaschia seosinensis [CYPR] 13324 13398 + Val GAC [ENA] ¡û
>W1610092613 CYPW01000006 Alphaproteobacteria Shimia marina [CYPW] 713403 713329 - Val GAC [ENA] ¡û
>W1610670323 LKBA01000024 Alphaproteobacteria Aliiroseovarius crassostreae [LKBA] 11387 11461 + Val GAC [ENA] ¡û
>W1610937350 LUOO01000047 Alphaproteobacteria Maritimibacter sp. REDSEA-S28_B5 [LUOO] 19690 19616 - Val GAC [ENA] ¡û
>W1610937390 LUOP01000011 Alphaproteobacteria Maritimibacter sp. REDSEA-S40_B3 [LUOP] 39828 39754 - Val GAC [ENA] ¡û
>W1611013241 LXYJ01000030 Alphaproteobacteria Jannaschia sp. EhC01 [LXYJ] 47412 47486 + Val GAC [ENA] ¡û
>W1710015400 AQQQ01000005 Alphaproteobacteria Roseovarius sp. 22II1-1F6A [AQQQ] 272388 272462 + Val GAC [ENA] ¡û
>W1710095719 CYPR01000003 Alphaproteobacteria Jannaschia seosinensis [CYPR] 13324 13398 + Val GAC [ENA] ¡û
>W1710095868 CYPW01000006 Alphaproteobacteria Shimia marina [CYPW] 713403 713329 - Val GAC [ENA] ¡û
>W1710542182 FNYY01000008 Alphaproteobacteria Marinovum algicola [FNYY] 146520 146446 - Val GAC [ENA] ¡û
>W1710546879 FOCM01000006 Alphaproteobacteria Palleronia pelagia pelagius [FOCM] 58179 58105 - Val GAC [ENA] ¡û
>W1710555054 FOJB01000001 Alphaproteobacteria Aliiroseovarius sediminilitoris [FOJB] 12627 12701 + Val GAC [ENA] ¡û
>W1710559626 FOMU01000001 Alphaproteobacteria Shimia marina [FOMU] 54967 55041 + Val GAC [ENA] ¡û
>W1710562815 FOPF01000005 Alphaproteobacteria Palleronia marisminoris [FOPF] 207249 207175 - Val GAC [ENA] ¡û
>W1710567753 FOSZ01000004 Alphaproteobacteria Shimia haliotis [FOSZ] 14782 14856 + Val GAC [ENA] ¡û
>W1710568497 FOTQ01000010 Alphaproteobacteria Shimia aestuarii [FOTQ] 19377 19451 + Val GAC [ENA] ¡û
>W1710574573 FOYI01000011 Alphaproteobacteria Poseidonocella sedimentorum [FOYI] 89215 89289 + Val GAC [ENA] ¡û
>W1710578591 FPBS01000003 Alphaproteobacteria Aliiroseovarius crassostreae [FPBS] 11020 11094 + Val GAC [ENA] ¡û
>W1710588022 FQZA01000003 Alphaproteobacteria Palleronia salina salinus [FQZA] 141230 141156 - Val GAC [ENA] ¡û
>W1710594775 FSRL01000001 Alphaproteobacteria Vannielia litorea litoreus [FSRL] 3126888 3126814 - Val GAC [ENA] ¡û
>W1710609099 FXBQ01000001 Alphaproteobacteria Maritimibacter sp. HL-12 [FXBQ] 1708798 1708724 - Val GAC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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