tRNA genes clustered and arranged according to each identical group

Line Islands Corals, viral fraction from water of Palmyra (SRP000141)

Anticodon = GTT

HIT: 9 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.2927 (2 seq.)
>ENV08000898 ABML01066553 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 1 94 + Asn GTT [ENA] ¡û
>SRA1000956 SRR001049.318969 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 1 94 + Asn GTT [SRA]
Identical group No.262805 (2 seq.)
>ENV08000922 ABML01176317 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 100 23 - Asn GTT [ENA] ¡û
>SRA1000901 SRR001049.49057 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 100 23 - Asn GTT [SRA]
Identical group No.305272 (4 seq.)
>ENV08000918 ABML01161660 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 6 82 + Asn GTT [ENA] ¡û
>WENV170186781 CEPA01083424 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 752 676 - Asn GTT [ENA] ¢þ
>WENV170934896 MDTG01246734 [MDTG] marine metagenome; seawater 509 585 + Asn GTT [ENA] ¢þ
>SRA1000932 SRR001049.195936 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 6 82 + Asn GTT [SRA]
Identical group No.409046 (6 seq.)
>ENV08000931 ABML01291914 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 12 85 + Asn GTT [ENA] ¡û
>SRA1000891 SRR001049.371 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 12 85 + Asn GTT [SRA]
>SRA1000892 SRR001049.1602 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 12 85 + Asn GTT [SRA]
>SRA1000893 SRR001049.2232 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 12 85 + Asn GTT [SRA]
>SRA1000927 SRR001049.173419 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 12 85 + Asn GTT [SRA]
>SRA1000928 SRR001049.180114 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 12 85 + Asn GTT [SRA]
Identical group No.604928 (2 seq.)
>ENV08000914 ABML01152891 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 84 8 - Asn GTT [ENA] ¡û
>SRA1000951 SRR001049.283690 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 84 8 - Asn GTT [SRA]
Identical group No.604931 (2 seq.)
>ENV08000923 ABML01181510 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 83 8 - Asn GTT [ENA] ¡û
>SRA1000917 SRR001049.138836 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 83 8 - Asn GTT [SRA]
Identical group No.647141 (1 seq.)
>SRA1000915 SRR001049.133544 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 31 103 + Asn GTT [SRA]
Identical group No.683774 (12 seq.)
>ENV08000885 ABML01024929 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 91 17 - Asn GTT [ENA] ¡û
>ENV08000886 ABML01026315 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 12 86 + Asn GTT [ENA] ¡û
>ENV08000888 ABML01028457 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 90 16 - Asn GTT [ENA] ¡û
>WENV170164713 CEON01016540 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 732 806 + Asn GTT [ENA] ¢þ
>WENV170198034 CEPK01185273 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 159 85 - Asn GTT [ENA] ¢þ
>WENV170593464 FUFK010886996 [FUFK] metagenome; unknown 54 128 + Asn GTT [ENA] ¢þ
>WENV170595544 FUFK011843828 [FUFK] metagenome; unknown 53 127 + Asn GTT [ENA] ¢þ
>SRA1000903 SRR001049.67996 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 90 16 - Asn GTT [SRA]
>SRA1000926 SRR001049.168946 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 12 86 + Asn GTT [SRA]
>SRA1000950 SRR001049.279022 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 91 17 - Asn GTT [SRA]
>SRA1000952 SRR001049.287012 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 91 17 - Asn GTT [SRA]
>SRA1000958 SRR001049.333312 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 12 86 + Asn GTT [SRA]
Identical group No.702720 (11 seq.)
>WENV170136309 CENV01021751 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 494 568 + Asn GTT [ENA] ¢þ
>WENV170148669 CEOA01013305 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 789 863 + Asn GTT [ENA] ¢þ
>WENV170148809 CEOA01036274 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 775 701 - Asn GTT [ENA] ¢þ
>WENV170148947 CEOA01063177 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1404 1478 + Asn GTT [ENA] ¢þ
>WENV170155458 CEOG01034526 [CEOG] marine metagenome genome assembly TARA_034_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1233 1159 - Asn GTT [ENA] ¢þ
>WENV170221608 CEQB01055966 [CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 134 60 - Asn GTT [ENA] ¢þ
>SRA1000912 SRR001049.110062 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 30 101 + Asn GTT [SRA]
>SRA1000914 SRR001049.131381 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 30 101 + Asn GTT [SRA]
>SRA1000920 SRR001049.142583 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 30 101 + Asn GTT [SRA]
>SRA1000924 SRR001049.155461 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 30 101 + Asn GTT [SRA]
>SRA1000957 SRR001049.332785 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 32 103 + Asn GTT [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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