tRNA genes clustered and arranged according to each identical group

Line Islands Corals microbial fraction from water of Fanning (SRP000142)

Anticodon = GAA

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.479949 (80 seq.)
>WENV180022661 FTGN01001002 [FTGN] metagenome; soil 577 652 + Phe GAA [ENA] ¢þ
>WENV180318000 OBKL01024365 [OBKL] soil metagenome; Alaskan Permafrost 84 159 + Phe GAA [ENA] ¢þ
>WENV181295925 OFHJ01002113 [OFHJ] soil metagenome; Clay 4484 4559 + Phe GAA [ENA] ¢þ
>WENV018399 AACY020508338 Marine microbial communities from Global Ocean Sampling (GOS) 9298 9375 + Phe GAA [ENA]
>WENV018722 AACY020516789 Marine microbial communities from Global Ocean Sampling (GOS) 709 784 + Phe GAA [ENA]
>WENV182556882 OJDH01000619 [OJDH] seawater metagenome; Sea water 4139 4214 + Phe GAA [ENA] ¢þ
>WENV182575577 OJFV01000135 [OJFV] seawater metagenome; Sea water 10753 10828 + Phe GAA [ENA] ¢þ
>WENV182590645 OJIJ01001272 [OJIJ] seawater metagenome; Sea water 1804 1879 + Phe GAA [ENA] ¢þ
>WENV183681685 ORMF010344506 [ORMF] groundwater metagenome; groundwater 416 491 + Phe GAA [ENA] ¢þ
>ENV08000932 ABMM01085007 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern LineIslands) 18 93 + Phe GAA [ENA] ¡û
>ENV08000933 ABMM01094287 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern LineIslands) 18 93 + Phe GAA [ENA] ¡û
>WENV183808227 PVBE011275737 [PVBE] marine metagenome; water 6120 6045 - Phe GAA [ENA] ¢þ
>WENV170123292 CENO01031288 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5486 5561 + Phe GAA [ENA] ¢þ
>WENV170129492 CENQ01101017 [CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 207 282 + Phe GAA [ENA] ¢þ
>WENV170140373 CENX01080261 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 203 128 - Phe GAA [ENA] ¢þ
>WENV170140521 CENX01093221 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 18399 18324 - Phe GAA [ENA] ¢þ
>WENV170143337 CENY01064373 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 223 148 - Phe GAA [ENA] ¢þ
>WENV170152447 CEOF01003829 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 17628 17553 - Phe GAA [ENA] ¢þ
>WENV170156979 CEOJ01025415 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5090 5015 - Phe GAA [ENA] ¢þ
>WENV170166834 CEOO01102621 [CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1191 1116 - Phe GAA [ENA] ¢þ
>WENV170169090 CEOP01158773 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 651 726 + Phe GAA [ENA] ¢þ
>WENV170178547 CEOV01055828 [CEOV] marine metagenome genome assembly TARA_062_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 531 456 - Phe GAA [ENA] ¢þ
>WENV170185895 CEPA01000188 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 199 274 + Phe GAA [ENA] ¢þ
>WENV170186469 CEPA01052629 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 279 354 + Phe GAA [ENA] ¢þ
>WENV170187276 CEPA01144075 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 261 336 + Phe GAA [ENA] ¢þ
>WENV170194689 CEPJ01056980 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1506 1581 + Phe GAA [ENA] ¢þ
>WENV170198880 CEPL01051835 [CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 16147 16222 + Phe GAA [ENA] ¢þ
>WENV170210762 CEPW01011743 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9036 8961 - Phe GAA [ENA] ¢þ
>WENV170222790 CEQD01065432 [CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 137 212 + Phe GAA [ENA] ¢þ
>WENV170255775 CEQX01021368 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 296 371 + Phe GAA [ENA] ¢þ
>WENV170257986 CEQY01028150 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 108 183 + Phe GAA [ENA] ¢þ
>WENV170279398 CERR01017454 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 303 228 - Phe GAA [ENA] ¢þ
>WENV170282091 CERS01135617 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 305 230 - Phe GAA [ENA] ¢þ
>WENV170298422 CESF01116743 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 275 - Phe GAA [ENA] ¢þ
>WENV170310433 CESM01039495 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1173 1098 - Phe GAA [ENA] ¢þ
>WENV170314899 CESO01040805 [CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1150 1075 - Phe GAA [ENA] ¢þ
>WENV170316368 CESP01035595 [CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 183 108 - Phe GAA [ENA] ¢þ
>WENV170341820 CETD01042895 [CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2497 2422 - Phe GAA [ENA] ¢þ
>WENV170341844 CETD01044756 [CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4226 4301 + Phe GAA [ENA] ¢þ
>WENV170351177 CETH01131734 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 575 500 - Phe GAA [ENA] ¢þ
>WENV170354132 CETI01086836 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 126 201 + Phe GAA [ENA] ¢þ
>WENV170358172 CETK01061667 [CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 363 288 - Phe GAA [ENA] ¢þ
>WENV170368076 CETQ01010034 [CETQ] marine metagenome genome assembly TARA_110_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1555 1480 - Phe GAA [ENA] ¢þ
>WENV170375952 CETU01028607 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 97 172 + Phe GAA [ENA] ¢þ
>WENV170386691 CETY01191137 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 694 619 - Phe GAA [ENA] ¢þ
>WENV170402931 CEUF01011390 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 453 528 + Phe GAA [ENA] ¢þ
>WENV170403419 CEUF01076858 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3155 3080 - Phe GAA [ENA] ¢þ
>WENV170407277 CEUH01122554 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 264 339 + Phe GAA [ENA] ¢þ
>WENV170411044 CEUJ01157320 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7504 7429 - Phe GAA [ENA] ¢þ
>WENV170414016 CEUK01167406 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4137 4062 - Phe GAA [ENA] ¢þ
>WENV170419724 CEUM01136880 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4205 4280 + Phe GAA [ENA] ¢þ
>WENV170440478 CEUV01101839 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4205 4280 + Phe GAA [ENA] ¢þ
>WENV170459296 CEVC01043184 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 42342 42417 + Phe GAA [ENA] ¢þ
>WENV170467467 CEVE01135291 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1352 1277 - Phe GAA [ENA] ¢þ
>WENV170473296 CEVH01021363 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 204 129 - Phe GAA [ENA] ¢þ
>WENV170484355 CEVN01016152 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 94 169 + Phe GAA [ENA] ¢þ
>WENV170503129 CEVV01056407 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 215 140 - Phe GAA [ENA] ¢þ
>WENV170505445 CEVW01065290 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 233 158 - Phe GAA [ENA] ¢þ
>WENV170513607 CEWA01016553 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2095 2020 - Phe GAA [ENA] ¢þ
>WENV170515119 CEWB01005057 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 170 95 - Phe GAA [ENA] ¢þ
>WENV170518908 CEWE01177367 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4203 4278 + Phe GAA [ENA] ¢þ
>WENV170530377 CEWK01016557 [CEWK] marine metagenome genome assembly TARA_132_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 15506 15581 + Phe GAA [ENA] ¢þ
>WENV170595704 FUFK011929101 [FUFK] metagenome; unknown 1 76 + Phe GAA [ENA] ¢þ
>WENV170620963 FUWD013044460 [FUWD] metagenome; unknown 2008 2083 + Phe GAA [ENA] ¢þ
>WENV170629121 FUWD013261377 [FUWD] metagenome; unknown 2008 2083 + Phe GAA [ENA] ¢þ
>WENV170782621 MAAC01010715 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 14117 14192 + Phe GAA [ENA] ¢þ
>WENV170794393 MDSV01131556 [MDSV] marine metagenome; seawater 1110 1035 - Phe GAA [ENA] ¢þ
>WENV170847467 MDTA01061500 [MDTA] marine metagenome; seawater 441 516 + Phe GAA [ENA] ¢þ
>WENV170864720 MDTB01109468 [MDTB] marine metagenome; seawater 2764 2689 - Phe GAA [ENA] ¢þ
>WENV170865338 MDTB01118109 [MDTB] marine metagenome; seawater 3908 3983 + Phe GAA [ENA] ¢þ
>WENV170873180 MDTB01228676 [MDTB] marine metagenome; seawater 5357 5432 + Phe GAA [ENA] ¢þ
>WENV170877243 MDTC01054182 [MDTC] marine metagenome; seawater 706 631 - Phe GAA [ENA] ¢þ
>WENV170902516 MDTD01186609 [MDTD] marine metagenome; seawater 2934 2859 - Phe GAA [ENA] ¢þ
>SRA1000962 SRR001050.114269 Line Islands Corals microbial fraction from water of Fanning (SRP000142) 18 93 + Phe GAA [SRA]
>SRA1000964 SRR001050.233482 Line Islands Corals microbial fraction from water of Fanning (SRP000142) 18 93 + Phe GAA [SRA]
>W1810520664 QCGV01000001 Alphaproteobacteria OCS116 cluster bacterium AG-390-A19 [QCGV] 57346 57271 - Phe GAA [ENA] ¡û
>W1810520789 QCGZ01000012 Alphaproteobacteria OCS116 cluster bacterium AG-390-I16 [QCGZ] 17032 16957 - Phe GAA [ENA] ¡û
>WENV032086 AACY021418353 Marine microbial communities from Global Ocean Sampling (GOS) 586 509 - Phe GAA [ENA]
>WENV047469 AACY022669071 Marine microbial communities from Global Ocean Sampling (GOS) 778 701 - Phe GAA [ENA]
>WENV074613 AACY023985700 Marine microbial communities from Global Ocean Sampling (GOS) 653 576 - Phe GAA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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