tRNA genes clustered and arranged according to each identical group

Line Islands Corals viral fraction from water of Fanning (SRP000143)

Anticodon = TAT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.252572 (2 seq.)
>ENV08000990 ABMN01194266 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 90 13 - Ile TAT [ENA] ¡û
>SRA1001035 SRR001051.375370 Line Islands Corals viral fraction from water of Fanning (SRP000143) 90 13 - Ile TAT [SRA]
Identical group No.502304 (7 seq.)
>ENV08000994 ABMN01226597 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 87 12 - Ile TAT [ENA] ¡û
>WENV170197833 CEPK01173127 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1475 1400 - Ile TAT [ENA] ¢þ
>WENV170222023 CEQC01072688 [CEQC] marine metagenome genome assembly TARA_076_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 719 644 - Ile TAT [ENA] ¢þ
>WENV170330961 CESW01015585 [CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9830 9905 + Ile TAT [ENA] ¢þ
>WENV170738231 LULO01031772 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 15 90 + Ile TAT [ENA] ¢þ
>WENV170842481 MDSZ01241330 [MDSZ] marine metagenome; seawater 5 80 + Ile TAT [ENA] ¢þ
>SRA1001030 SRR001051.335418 Line Islands Corals viral fraction from water of Fanning (SRP000143) 87 12 - Ile TAT [SRA]
Identical group No.503406 (15 seq.)
>WENV180047788 MPLT02268503 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 98 173 + Ile TAT [ENA] ¢þ
>WENV180052199 MPLU02276049 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 250 175 - Ile TAT [ENA] ¢þ
>ENV08000975 ABMN01136705 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 97 22 - Ile TAT [ENA] ¡û
>WENV183796924 PVBE010289452 [PVBE] marine metagenome; water 1501 1576 + Ile TAT [ENA] ¢þ
>WENV170307886 CESK01021111 [CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4 79 + Ile TAT [ENA] ¢þ
>WENV170340812 CETC01035383 [CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 135 210 + Ile TAT [ENA] ¢þ
>WENV170423861 CEUO01036697 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2658 2583 - Ile TAT [ENA] ¢þ
>WENV170512642 CEVZ01216243 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 383 308 - Ile TAT [ENA] ¢þ
>WENV170583861 FUFK010169003 [FUFK] metagenome; unknown 932 857 - Ile TAT [ENA] ¢þ
>WENV170583864 FUFK010169003 [FUFK] metagenome; unknown 444 369 - Ile TAT [ENA] ¢þ
>WENV170584013 FUFK010183721 [FUFK] metagenome; unknown 935 860 - Ile TAT [ENA] ¢þ
>WENV170829535 MDSZ01010611 [MDSZ] marine metagenome; seawater 750 825 + Ile TAT [ENA] ¢þ
>WENV170841046 MDSZ01215312 [MDSZ] marine metagenome; seawater 150 225 + Ile TAT [ENA] ¢þ
>SRA1000988 SRR001051.80207 Line Islands Corals viral fraction from water of Fanning (SRP000143) 97 22 - Ile TAT [SRA]
>SRA1008381 SRR020490.336509 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 232 157 - Ile TAT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK