tRNA genes clustered and arranged according to each identical group

Line Islands Corals viral fraction from water of Fanning (SRP000143)

Anticodon = TCT

HIT: 12 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.284296 (14 seq.)
>WENV180048858 MPLU02016798 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 216 140 - Arg TCT [ENA] ¢þ
>WENV180051519 MPLU02220797 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 580 504 - Arg TCT [ENA] ¢þ
>WENV180080984 MPMC02073389 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 4 80 + Arg TCT [ENA] ¢þ
>WENV180085913 MPMD02391267 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 545 469 - Arg TCT [ENA] ¢þ
>ENV08000945 ABMN01042781 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 39 115 + Arg TCT [ENA] ¡û
>WENV183794386 PVBE010093458 [PVBE] marine metagenome; water 323 247 - Arg TCT [ENA] ¢þ
>WENV183807050 PVBE011167368 [PVBE] marine metagenome; water 11 87 + Arg TCT [ENA] ¢þ
>WENV170148746 CEOA01024829 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 131 207 + Arg TCT [ENA] ¢þ
>WENV170173338 CEOQ01200989 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 273 197 - Arg TCT [ENA] ¢þ
>WENV170408088 CEUI01001257 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20673 20597 - Arg TCT [ENA] ¢þ
>WENV170413098 CEUK01079130 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 71 147 + Arg TCT [ENA] ¢þ
>WENV170443814 CEUX01017549 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 330 406 + Arg TCT [ENA] ¢þ
>WENV170796445 MDSV01164174 [MDSV] marine metagenome; seawater 982 1058 + Arg TCT [ENA] ¢þ
>SRA1000967 SRR001051.1092 Line Islands Corals viral fraction from water of Fanning (SRP000143) 39 115 + Arg TCT [SRA]
Identical group No.305276 (8 seq.)
>ENV08000995 ABMN01241717 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 85 9 - Arg TCT [ENA] ¡û
>WENV170197921 CEPK01179018 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 699 623 - Arg TCT [ENA] ¢þ
>WENV170245794 CEQP01126471 [CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 297 221 - Arg TCT [ENA] ¢þ
>WENV170252492 CEQU01010625 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 96 - Arg TCT [ENA] ¢þ
>WENV170830253 MDSZ01023695 [MDSZ] marine metagenome; seawater 7766 7690 - Arg TCT [ENA] ¢þ
>WENV170857819 MDTB01013729 [MDTB] marine metagenome; seawater 1531 1607 + Arg TCT [ENA] ¢þ
>WENV170934992 MDTG01248751 [MDTG] marine metagenome; seawater 2412 2336 - Arg TCT [ENA] ¢þ
>SRA1001007 SRR001051.178453 Line Islands Corals viral fraction from water of Fanning (SRP000143) 85 9 - Arg TCT [SRA]
Identical group No.305537 (13 seq.)
>ENV08000989 ABMN01188590 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 104 28 - Arg TCT [ENA] ¡û
>WENV170148739 CEOA01023966 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 420 496 + Arg TCT [ENA] ¢þ
>WENV170310165 CESM01017204 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1401 1325 - Arg TCT [ENA] ¢þ
>WENV170361219 CETL01325116 [CETL] marine metagenome genome assembly TARA_112_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1107 1031 - Arg TCT [ENA] ¢þ
>WENV170430988 CEUS01015092 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 310 234 - Arg TCT [ENA] ¢þ
>WENV170453930 CEVA01013128 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 313 237 - Arg TCT [ENA] ¢þ
>WENV170751046 LUMH01013622 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 301 377 + Arg TCT [ENA] ¢þ
>WENV170751964 LUMI01019698 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 1168 1092 - Arg TCT [ENA] ¢þ
>WENV170852112 MDTA01143787 [MDTA] marine metagenome; seawater 5227 5303 + Arg TCT [ENA] ¢þ
>WENV170900387 MDTD01153716 [MDTD] marine metagenome; seawater 15 91 + Arg TCT [ENA] ¢þ
>WENV170914775 MDTE01153640 [MDTE] marine metagenome; seawater 1306 1382 + Arg TCT [ENA] ¢þ
>WENV170938812 MDTG01315301 [MDTG] marine metagenome; seawater 1028 952 - Arg TCT [ENA] ¢þ
>SRA1001003 SRR001051.140905 Line Islands Corals viral fraction from water of Fanning (SRP000143) 104 28 - Arg TCT [SRA]
Identical group No.333155 (6 seq.)
>ENV08000979 ABMN01153814 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 81 5 - Arg TCT [ENA] ¡û
>WENV183811519 PVBE011589861 [PVBE] marine metagenome; water 515 441 - Arg TCT [ENA] ¢þ
>WENV170148996 CEOA01069452 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 267 343 + Arg TCT [ENA] ¢þ
>WENV170221366 CEQA01115145 [CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 426 + Arg TCT [ENA] ¢þ
>WENV170834113 MDSZ01092282 [MDSZ] marine metagenome; seawater 1604 1680 + Arg TCT [ENA] ¢þ
>SRA1000978 SRR001051.51319 Line Islands Corals viral fraction from water of Fanning (SRP000143) 81 5 - Arg TCT [SRA]
Identical group No.349066 (7 seq.)
>ENV08001002 ABMN01346701 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 5 79 + Arg TCT [ENA] ¡û
>WENV170130220 CENQ01238079 [CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 459 533 + Arg TCT [ENA] ¢þ
>WENV170254311 CEQV01032641 [CEQV] marine metagenome genome assembly TARA_072_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 302 228 - Arg TCT [ENA] ¢þ
>WENV170365287 CETN01048377 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 46 120 + Arg TCT [ENA] ¢þ
>WENV170382035 CETW01340219 [CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 246 + Arg TCT [ENA] ¢þ
>WENV170458605 CEVB01128605 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 227 301 + Arg TCT [ENA] ¢þ
>SRA1000973 SRR001051.31114 Line Islands Corals viral fraction from water of Fanning (SRP000143) 5 79 + Arg TCT [SRA]
Identical group No.349077 (7 seq.)
>ENV08000968 ABMN01122403 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 82 6 - Arg TCT [ENA] ¡û
>ENV08000981 ABMN01158726 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 100 24 - Arg TCT [ENA] ¡û
>WENV170440676 CEUV01120620 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 244 320 + Arg TCT [ENA] ¢þ
>WENV170443075 CEUW01095082 [CEUW] marine metagenome genome assembly TARA_122_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 614 538 - Arg TCT [ENA] ¢þ
>WENV170894143 MDTD01061501 [MDTD] marine metagenome; seawater 6581 6657 + Arg TCT [ENA] ¢þ
>SRA1001012 SRR001051.197612 Line Islands Corals viral fraction from water of Fanning (SRP000143) 82 6 - Arg TCT [SRA]
>SRA1001025 SRR001051.302272 Line Islands Corals viral fraction from water of Fanning (SRP000143) 100 24 - Arg TCT [SRA]
Identical group No.349078 (2 seq.)
>ENV08000950 ABMN01061853 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 116 39 - Arg TCT [ENA] ¡û
>SRA1001024 SRR001051.300651 Line Islands Corals viral fraction from water of Fanning (SRP000143) 116 39 - Arg TCT [SRA]
Identical group No.349079 (1 seq.)
>SRA1001027 SRR001051.319955 Line Islands Corals viral fraction from water of Fanning (SRP000143) 35 110 + Arg TCT [SRA]
Identical group No.349080 (2 seq.)
>ENV08000955 ABMN01077229 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 106 30 - Arg TCT [ENA] ¡û
>SRA1001033 SRR001051.367909 Line Islands Corals viral fraction from water of Fanning (SRP000143) 106 30 - Arg TCT [SRA]
Identical group No.349081 (2 seq.)
>ENV08000992 ABMN01221950 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 11 87 + Arg TCT [ENA] ¡û
>SRA1001040 SRR001051.400183 Line Islands Corals viral fraction from water of Fanning (SRP000143) 11 87 + Arg TCT [SRA]
Identical group No.349082 (2 seq.)
>ENV08000961 ABMN01085857 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 96 20 - Arg TCT [ENA] ¡û
>SRA1001041 SRR001051.410239 Line Islands Corals viral fraction from water of Fanning (SRP000143) 96 20 - Arg TCT [SRA]
Identical group No.537958 (7 seq.)
>ENV08000985 ABMN01178963 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 26 101 + Arg TCT [ENA] ¡û
>WENV170406885 CEUH01069651 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 402 327 - Arg TCT [ENA] ¢þ
>WENV170522363 CEWG01090012 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5212 5137 - Arg TCT [ENA] ¢þ
>WENV170528309 CEWJ01033894 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 497 572 + Arg TCT [ENA] ¢þ
>WENV170529644 CEWJ01142034 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1772 1847 + Arg TCT [ENA] ¢þ
>WENV170901674 MDTD01174335 [MDTD] marine metagenome; seawater 3095 3170 + Arg TCT [ENA] ¢þ
>SRA1000983 SRR001051.68332 Line Islands Corals viral fraction from water of Fanning (SRP000143) 26 101 + Arg TCT [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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